Microexon ID At_5:23254975-23254983:-
Species Arabidopsis thaliana
Coordinates 5:23254975..23254983
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGTGGTTATGATAAGGAAGATAAAGCAGCTAGAGCTTACGACCTTGCAGCT
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA
Microexon-tag spanning region23254783-23255260
Microexon-tag prediction score0.9773
Overlapped with the annotated transcript (%) 100
New Transcript ID AT5G57390.1x
Reference Transcript ID AT5G57390.1
Gene ID AT5G57390
Gene Name AIL5
Transcript ID AT5G57390.1
Protein ID AT5G57390.1
Gene ID AT5G57390
Gene Name AIL5
Pfam domain motif AP2
Motif E-value 2.8e-12
Motif start 203
Motif end 261
Protein seq >AT5G57390.1
MKNNNNKSSSSSSYDSSLSPSSSSSSHQNWLSFSLSNNNNNFNSSSNPNLTSSTSDHHHPHPSHLSLFQAFSTSPVERQD
GSPGVSPSDATAVLSVYPGGPKLENFLGGGASTTTTRPMQQVQSLGGVVFSSDLQPPLHPPSAAEIYDSELKSIAASFLG
NYSGGHSSEVSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLG
GYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQA
RIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCNLPVGGLMPKPSPATAAADKTVDLS
PSDSPSLTTPSLTFNVATPVNDHGGTFYHTGIPIKPDPADHYWSNIFGFQANPKAEMRPLANFGSDLHNPSPGYAIMPVM
QEGENNFGGSFVGSDGYNNHSAASNPVSAIPLSSTTTMSNGNEGYGGNINWINNNISSSYQTAKSNLSVLHTPVFGLE*
CDS seq >AT5G57390.1
ATGAAGAACAATAACAACAAATCTTCTTCTTCTTCTAGCTATGATTCTTCTTTGTCTCCTTCTTCTTCATCCTCCTCCCA
CCAGAACTGGCTCTCTTTCTCTCTCTCCAACAATAACAACAACTTCAATTCTTCCTCAAACCCTAATCTCACTTCCTCCA
CATCAGATCATCATCATCCTCACCCTTCTCACCTCTCTCTCTTTCAAGCTTTCTCCACTTCTCCAGTCGAACGGCAAGAT
GGGTCACCGGGAGTTTCACCCAGCGATGCCACGGCGGTTCTTTCCGTATACCCCGGCGGTCCTAAACTTGAGAACTTCCT
CGGCGGAGGAGCCTCAACGACGACAACAAGACCAATGCAACAAGTGCAATCTCTTGGCGGCGTTGTCTTCTCTTCCGACC
TACAGCCACCGCTTCATCCTCCGTCCGCCGCCGAGATCTACGACTCTGAGCTCAAGTCAATAGCCGCTAGCTTCCTAGGA
AACTACTCCGGTGGACACTCGTCGGAGGTCTCTAGCGTACATAAACAACAACCGAATCCTCTAGCTGTCTCAGAGGCTTC
GCCTACTCCGAAGAAGAACGTAGAGAGTTTTGGACAACGTACCTCGATTTATAGAGGAGTCACAAGACATAGATGGACTG
GAAGATACGAAGCTCATCTATGGGATAATAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGT
GGTTATGATAAGGAAGATAAAGCAGCTAGAGCTTACGACCTTGCAGCTCTTAAGTATTGGGGTCCTACAACTACGACTAA
TTTCCCGATATCAAATTACGAATCTGAACTTGAAGAAATGAAACACATGACTCGACAAGAGTTCGTTGCTTCTTTAAGAC
GGAAAAGCAGTGGATTCTCTAGGGGTGCCTCCATGTACAGAGGCGTCACTAGACATCATCAGCATGGTCGATGGCAGGCA
CGAATTGGAAGAGTTGCAGGCAACAAAGACCTTTATCTTGGCACATTTAGCACTCAAGAGGAAGCTGCAGAAGCTTATGA
TATAGCAGCGATCAAATTCCGCGGTCTAAATGCAGTCACCAATTTCGACATCAGTCGATATGATGTCAAATCAATTGCTA
GCTGTAATCTCCCTGTGGGTGGACTAATGCCTAAACCTTCTCCAGCAACCGCAGCGGCTGACAAAACCGTTGATCTTTCT
CCATCCGACTCTCCATCTCTAACCACACCGTCCCTCACGTTCAATGTGGCAACACCGGTCAATGACCATGGAGGAACTTT
TTACCACACTGGTATACCAATCAAACCAGACCCGGCTGATCATTATTGGTCCAACATCTTTGGATTCCAGGCAAACCCGA
AAGCAGAAATGCGACCATTAGCAAACTTTGGGTCGGATCTTCATAACCCTTCTCCTGGTTATGCTATAATGCCGGTAATG
CAGGAAGGTGAAAACAACTTTGGTGGTAGTTTTGTTGGGTCTGATGGGTATAACAATCATTCCGCTGCATCGAACCCGGT
CTCAGCAATTCCGCTGTCCTCGACAACTACAATGAGTAACGGTAACGAAGGGTATGGTGGAAACATAAACTGGATTAATA
ACAACATTTCAAGTTCTTACCAAACTGCAAAATCAAATCTCTCTGTTTTGCACACACCGGTTTTTGGGTTGGAATGA
Microexon DNA seq TTTATTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGTGGTTATGATAAGGAAGATAAAGCAGCTAGAGCTTACGACCTTGCAGCT
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAA
Transcript ID AT5G57390.1
Gene ID At.26880
Gene Name AIL5
Pfam domain motif AP2
Motif E-value 2.8e-12
Motif start 203
Motif end 261
Protein seq >AT5G57390.1
MKNNNNKSSSSSSYDSSLSPSSSSSSHQNWLSFSLSNNNNNFNSSSNPNLTSSTSDHHHPHPSHLSLFQAFSTSPVERQD
GSPGVSPSDATAVLSVYPGGPKLENFLGGGASTTTTRPMQQVQSLGGVVFSSDLQPPLHPPSAAEIYDSELKSIAASFLG
NYSGGHSSEVSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLG
GYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQA
RIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCNLPVGGLMPKPSPATAAADKTVDLS
PSDSPSLTTPSLTFNVATPVNDHGGTFYHTGIPIKPDPADHYWSNIFGFQANPKAEMRPLANFGSDLHNPSPGYAIMPVM
QEGENNFGGSFVGSDGYNNHSAASNPVSAIPLSSTTTMSNGNEGYGGNINWINNNISSSYQTAKSNLSVLHTPVFGLE*
CDS seq >AT5G57390.1
ATGAAGAACAATAACAACAAATCTTCTTCTTCTTCTAGCTATGATTCTTCTTTGTCTCCTTCTTCTTCATCCTCCTCCCA
CCAGAACTGGCTCTCTTTCTCTCTCTCCAACAATAACAACAACTTCAATTCTTCCTCAAACCCTAATCTCACTTCCTCCA
CATCAGATCATCATCATCCTCACCCTTCTCACCTCTCTCTCTTTCAAGCTTTCTCCACTTCTCCAGTCGAACGGCAAGAT
GGGTCACCGGGAGTTTCACCCAGCGATGCCACGGCGGTTCTTTCCGTATACCCCGGCGGTCCTAAACTTGAGAACTTCCT
CGGCGGAGGAGCCTCAACGACGACAACAAGACCAATGCAACAAGTGCAATCTCTTGGCGGCGTTGTCTTCTCTTCCGACC
TACAGCCACCGCTTCATCCTCCGTCCGCCGCCGAGATCTACGACTCTGAGCTCAAGTCAATAGCCGCTAGCTTCCTAGGA
AACTACTCCGGTGGACACTCGTCGGAGGTCTCTAGCGTACATAAACAACAACCGAATCCTCTAGCTGTCTCAGAGGCTTC
GCCTACTCCGAAGAAGAACGTAGAGAGTTTTGGACAACGTACCTCGATTTATAGAGGAGTCACAAGACATAGATGGACTG
GAAGATACGAAGCTCATCTATGGGATAATAGTTGCCGAAGAGAAGGCCAAAGCAGAAAAGGAAGACAAGTTTATTTAGGT
GGTTATGATAAGGAAGATAAAGCAGCTAGAGCTTACGACCTTGCAGCTCTTAAGTATTGGGGTCCTACAACTACGACTAA
TTTCCCGATATCAAATTACGAATCTGAACTTGAAGAAATGAAACACATGACTCGACAAGAGTTCGTTGCTTCTTTAAGAC
GGAAAAGCAGTGGATTCTCTAGGGGTGCCTCCATGTACAGAGGCGTCACTAGACATCATCAGCATGGTCGATGGCAGGCA
CGAATTGGAAGAGTTGCAGGCAACAAAGACCTTTATCTTGGCACATTTAGCACTCAAGAGGAAGCTGCAGAAGCTTATGA
TATAGCAGCGATCAAATTCCGCGGTCTAAATGCAGTCACCAATTTCGACATCAGTCGATATGATGTCAAATCAATTGCTA
GCTGTAATCTCCCTGTGGGTGGACTAATGCCTAAACCTTCTCCAGCAACCGCAGCGGCTGACAAAACCGTTGATCTTTCT
CCATCCGACTCTCCATCTCTAACCACACCGTCCCTCACGTTCAATGTGGCAACACCGGTCAATGACCATGGAGGAACTTT
TTACCACACTGGTATACCAATCAAACCAGACCCGGCTGATCATTATTGGTCCAACATCTTTGGATTCCAGGCAAACCCGA
AAGCAGAAATGCGACCATTAGCAAACTTTGGGTCGGATCTTCATAACCCTTCTCCTGGTTATGCTATAATGCCGGTAATG
CAGGAAGGTGAAAACAACTTTGGTGGTAGTTTTGTTGGGTCTGATGGGTATAACAATCATTCCGCTGCATCGAACCCGGT
CTCAGCAATTCCGCTGTCCTCGACAACTACAATGAGTAACGGTAACGAAGGGTATGGTGGAAACATAAACTGGATTAATA
ACAACATTTCAAGTTCTTACCAAACTGCAAAATCAAATCTCTCTGTTTTGCACACACCGGTTTTTGGGTTGGAATGA