Microexon ID At_3:7301705-7301713:+
Species Arabidopsis thaliana
Coordinates 3:7301705..7301713
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGTTGTAGAAGGGAAGGCCAGTCTAGGAAAGGAAGACAAGTTTACTTGGGTGGATATGACAAAGAAGATAAAGCAGCAAGATCATATGATCTAGCTGCA
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAA
Microexon-tag spanning region7301524-7301845
Microexon-tag prediction score0.9664
Overlapped with the annotated transcript (%) 100
New Transcript ID AT3G20840.1x
Reference Transcript ID AT3G20840.1
Gene ID AT3G20840
Gene Name PLT1
Transcript ID AT3G20840.1
Protein ID AT3G20840.1
Gene ID AT3G20840
Gene Name PLT1
Pfam domain motif AP2
Motif E-value 1.8e-11
Motif start 181
Motif end 239
Protein seq >AT3G20840.1
MNSNNWLGFPLSPNNSSLPPHEYNLGLVSDHMDNPFQTQEWNMINPHGGGGDEGGEVPKVADFLGVSKPDENQSNHLVAY
NDSDYYFHTNSLMPSVQSNDVVVAACDSNTPNNSSYHELQESAHNLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGAL
AVVETATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGP
STTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEA
AEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSG
STSSRLQLQPYPLSIQQPLEPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAYL
HSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGIGSSSTVGSTEEFPTVKTDYDMPSSDGTGGYSGWTSESV
QGSNPGGVFTMWNE*
CDS seq >AT3G20840.1
ATGAATTCTAACAACTGGCTTGGCTTTCCTCTTTCACCGAACAACTCTTCTTTGCCTCCTCATGAATACAACCTTGGCTT
GGTCAGCGACCATATGGACAACCCTTTTCAAACACAAGAGTGGAATATGATCAATCCACACGGTGGAGGAGGAGATGAAG
GAGGAGAGGTTCCAAAAGTGGCCGATTTTCTCGGTGTGAGCAAACCGGACGAAAACCAATCCAACCACCTAGTAGCTTAC
AACGACTCAGACTACTACTTCCATACCAATAGCTTGATGCCTAGCGTCCAATCAAACGATGTCGTTGTAGCAGCTTGTGA
CTCCAATACTCCTAACAACAGTAGCTATCATGAGCTTCAAGAGAGTGCTCACAATCTACAGTCACTTACTTTGTCCATGG
GGACCACCGCTGGTAATAATGTTGTAGACAAAGCTTCACCATCCGAGACCACCGGGGATAACGCTAGCGGTGGAGCACTA
GCCGTTGTTGAGACGGCCACGCCAAGACGTGCATTGGACACTTTCGGACAACGAACCTCGATCTATCGTGGTGTCACAAG
ACATCGATGGACTGGTCGATATGAGGCTCATCTATGGGATAATAGTTGTAGAAGGGAAGGCCAGTCTAGGAAAGGAAGAC
AAGTTTACTTGGGTGGATATGACAAAGAAGATAAAGCAGCAAGATCATATGATCTAGCTGCACTTAAGTACTGGGGTCCT
TCAACTACTACTAATTTCCCCATTACAAACTACGAGAAAGAAGTAGAGGAAATGAAGCACATGACGAGACAAGAGTTCGT
GGCTGCCATTAGAAGGAAAAGTAGTGGATTTTCGAGAGGCGCTTCGATGTATCGAGGAGTTACAAGGCATCACCAACATG
GAAGATGGCAAGCAAGGATCGGCCGAGTCGCCGGAAACAAAGACCTCTACTTGGGAACTTTTAGCACTGAGGAAGAAGCA
GCAGAAGCTTACGATATAGCTGCAATAAAGTTTAGAGGACTTAATGCAGTGACCAACTTCGAGATCAACCGGTACGACGT
GAAAGCCATTCTAGAGAGTAGCACTCTTCCCATCGGAGGAGGCGCAGCTAAACGGCTCAAAGAAGCTCAAGCTCTTGAGT
CTTCAAGGAAACGCGAGGCGGAGATGATAGCCCTTGGTTCAAGTTTCCAGTACGGTGGTGGCTCGAGCACAGGCTCTGGC
TCCACCTCATCAAGACTTCAGCTTCAACCTTACCCTCTAAGCATTCAACAACCATTAGAGCCTTTTCTATCTCTTCAGAA
CAATGACATCTCTCATTACAACAACAACAATGCTCACGATTCCTCCTCTTTTAATCACCATAGCTATATCCAGACACAAC
TTCATCTCCACCAACAGACCAACAATTACTTGCAGCAACAGTCGAGCCAGAACTCTCAGCAGCTCTACAATGCGTATCTT
CATAGCAATCCGGCTCTGCTTCATGGACTTGTCTCTACCTCTATCGTTGACAACAATAATAACAATGGAGGCTCTAGTGG
GAGCTACAACACTGCAGCATTTCTTGGGAACCACGGTATTGGTATTGGGTCCAGCTCGACTGTTGGATCGACCGAGGAGT
TTCCAACCGTTAAAACAGATTACGATATGCCTTCCAGTGATGGAACCGGAGGGTATAGTGGTTGGACCAGTGAGTCTGTT
CAGGGGTCAAACCCTGGTGGTGTTTTCACTATGTGGAATGAGTAA
Microexon DNA seq TTTACTTGG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGTTGTAGAAGGGAAGGCCAGTCTAGGAAAGGAAGACAAGTTTACTTGGGTGGATATGACAAAGAAGATAAAGCAGCAAGATCATATGATCTAGCTGCA
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAA
Transcript ID AT3G20840.1
Gene ID At.14127
Gene Name PLT1
Pfam domain motif AP2
Motif E-value 1.8e-11
Motif start 181
Motif end 239
Protein seq >AT3G20840.1
MNSNNWLGFPLSPNNSSLPPHEYNLGLVSDHMDNPFQTQEWNMINPHGGGGDEGGEVPKVADFLGVSKPDENQSNHLVAY
NDSDYYFHTNSLMPSVQSNDVVVAACDSNTPNNSSYHELQESAHNLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGAL
AVVETATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGP
STTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEA
AEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSG
STSSRLQLQPYPLSIQQPLEPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQTNNYLQQQSSQNSQQLYNAYL
HSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGIGSSSTVGSTEEFPTVKTDYDMPSSDGTGGYSGWTSESV
QGSNPGGVFTMWNE*
CDS seq >AT3G20840.1
ATGAATTCTAACAACTGGCTTGGCTTTCCTCTTTCACCGAACAACTCTTCTTTGCCTCCTCATGAATACAACCTTGGCTT
GGTCAGCGACCATATGGACAACCCTTTTCAAACACAAGAGTGGAATATGATCAATCCACACGGTGGAGGAGGAGATGAAG
GAGGAGAGGTTCCAAAAGTGGCCGATTTTCTCGGTGTGAGCAAACCGGACGAAAACCAATCCAACCACCTAGTAGCTTAC
AACGACTCAGACTACTACTTCCATACCAATAGCTTGATGCCTAGCGTCCAATCAAACGATGTCGTTGTAGCAGCTTGTGA
CTCCAATACTCCTAACAACAGTAGCTATCATGAGCTTCAAGAGAGTGCTCACAATCTACAGTCACTTACTTTGTCCATGG
GGACCACCGCTGGTAATAATGTTGTAGACAAAGCTTCACCATCCGAGACCACCGGGGATAACGCTAGCGGTGGAGCACTA
GCCGTTGTTGAGACGGCCACGCCAAGACGTGCATTGGACACTTTCGGACAACGAACCTCGATCTATCGTGGTGTCACAAG
ACATCGATGGACTGGTCGATATGAGGCTCATCTATGGGATAATAGTTGTAGAAGGGAAGGCCAGTCTAGGAAAGGAAGAC
AAGTTTACTTGGGTGGATATGACAAAGAAGATAAAGCAGCAAGATCATATGATCTAGCTGCACTTAAGTACTGGGGTCCT
TCAACTACTACTAATTTCCCCATTACAAACTACGAGAAAGAAGTAGAGGAAATGAAGCACATGACGAGACAAGAGTTCGT
GGCTGCCATTAGAAGGAAAAGTAGTGGATTTTCGAGAGGCGCTTCGATGTATCGAGGAGTTACAAGGCATCACCAACATG
GAAGATGGCAAGCAAGGATCGGCCGAGTCGCCGGAAACAAAGACCTCTACTTGGGAACTTTTAGCACTGAGGAAGAAGCA
GCAGAAGCTTACGATATAGCTGCAATAAAGTTTAGAGGACTTAATGCAGTGACCAACTTCGAGATCAACCGGTACGACGT
GAAAGCCATTCTAGAGAGTAGCACTCTTCCCATCGGAGGAGGCGCAGCTAAACGGCTCAAAGAAGCTCAAGCTCTTGAGT
CTTCAAGGAAACGCGAGGCGGAGATGATAGCCCTTGGTTCAAGTTTCCAGTACGGTGGTGGCTCGAGCACAGGCTCTGGC
TCCACCTCATCAAGACTTCAGCTTCAACCTTACCCTCTAAGCATTCAACAACCATTAGAGCCTTTTCTATCTCTTCAGAA
CAATGACATCTCTCATTACAACAACAACAATGCTCACGATTCCTCCTCTTTTAATCACCATAGCTATATCCAGACACAAC
TTCATCTCCACCAACAGACCAACAATTACTTGCAGCAACAGTCGAGCCAGAACTCTCAGCAGCTCTACAATGCGTATCTT
CATAGCAATCCGGCTCTGCTTCATGGACTTGTCTCTACCTCTATCGTTGACAACAATAATAACAATGGAGGCTCTAGTGG
GAGCTACAACACTGCAGCATTTCTTGGGAACCACGGTATTGGTATTGGGTCCAGCTCGACTGTTGGATCGACCGAGGAGT
TTCCAACCGTTAAAACAGATTACGATATGCCTTCCAGTGATGGAACCGGAGGGTATAGTGGTTGGACCAGTGAGTCTGTT
CAGGGGTCAAACCCTGGTGGTGTTTTCACTATGTGGAATGAGTAA