
Microexon ID | At_3:20115339-20115347:+ |
Species | Arabidopsis thaliana | Coordinates | 3:20115339..20115347 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAGGCAAACAAGTTTATCTGGGAGCATATGACAGTGAAGAAGCAGCAGCACATACGTACGATCTGGCTGCT |
Microexon-tag Amino Acid Seq | WDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAA |
Microexon-tag spanning region | 20115161-20115515 |
Microexon-tag prediction score | 0.9462 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT3G54320.1x |
Reference Transcript ID | AT3G54320.1 |
Gene ID | AT3G54320 |
Gene Name | WRI1 |
Transcript ID | AT3G54320.1 |
Protein ID | AT3G54320.1 |
Gene ID | AT3G54320 |
Gene Name | WRI1 |
Pfam domain motif | AP2 |
Motif E-value | 6.3e-13 |
Motif start | 65 |
Motif end | 123 |
Protein seq | >AT3G54320.1 MKKRLTTSTCSSSPSSSVSSSTTTSSPIQSEAPRPKRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEA HLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSG FSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFP FPVNQANHQEGILVEAKQEVETREAKEEPREEVKQQYVEEPPQEEEEKEEEKAEQQEAEIVGYSEEAAVVNCCIDSSTIM EMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANENPIEYPELFNELAFEDNIDFMFDDGKHECLNLENLDCCVVGRESPP SSSSPLSCLSTDSASSTTTTTTSVSCNYLFQGLFVGSE* |
CDS seq | >AT3G54320.1 ATGAAGAAGCGCTTAACCACTTCCACTTGTTCTTCTTCTCCATCTTCCTCTGTTTCTTCTTCTACTACTACTTCCTCTCC TATTCAGTCGGAGGCTCCAAGGCCTAAACGAGCCAAAAGGGCTAAGAAATCTTCTCCTTCTGGTGATAAATCTCATAACC CGACAAGCCCTGCTTCTACCCGACGCAGCTCTATCTACAGAGGAGTCACTAGACATAGATGGACTGGGAGATTCGAGGCT CATCTTTGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAGGCAAACAAGTTTATCTGGGAGCATATGACAGTGA AGAAGCAGCAGCACATACGTACGATCTGGCTGCTCTCAAGTACTGGGGACCCGACACCATCTTGAATTTTCCGGCAGAGA CGTACACAAAGGAATTGGAAGAAATGCAGAGAGTGACAAAGGAAGAATATTTGGCTTCTCTCCGCCGCCAGAGCAGTGGT TTCTCCAGAGGCGTCTCTAAATATCGCGGCGTCGCTAGGCATCACCACAACGGAAGATGGGAGGCTCGGATCGGAAGAGT GTTTGGGAACAAGTACTTGTACCTCGGCACCTATAATACGCAGGAGGAAGCTGCTGCAGCATATGACATGGCTGCGATTG AGTATCGAGGCGCAAACGCGGTTACTAATTTCGACATTAGTAATTACATTGACCGGTTAAAGAAGAAAGGTGTTTTCCCG TTCCCTGTGAACCAAGCTAACCATCAAGAGGGTATTCTTGTTGAAGCCAAACAAGAAGTTGAAACGAGAGAAGCGAAGGA AGAGCCTAGAGAAGAAGTGAAACAACAGTACGTGGAAGAACCACCGCAAGAAGAAGAAGAGAAGGAAGAAGAGAAAGCAG AGCAACAAGAAGCAGAGATTGTAGGATATTCAGAAGAAGCAGCAGTGGTCAATTGCTGCATAGACTCTTCAACCATAATG GAAATGGATCGTTGTGGGGACAACAATGAGCTGGCTTGGAACTTCTGTATGATGGATACAGGGTTTTCTCCGTTTTTGAC TGATCAGAATCTCGCGAATGAGAATCCCATAGAGTATCCGGAGCTATTCAATGAGTTAGCATTTGAGGACAACATCGACT TCATGTTCGATGATGGGAAGCACGAGTGCTTGAACTTGGAAAATCTGGATTGTTGCGTGGTGGGAAGAGAGAGCCCACCC TCTTCTTCTTCACCATTGTCTTGCTTATCTACTGACTCTGCTTCATCAACAACAACAACAACAACCTCGGTTTCTTGTAA CTATTTGTTTCAGGGCTTGTTCGTTGGTTCTGAATAA |
Microexon DNA seq | TTTATCTGG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAGGCAAACAAGTTTATCTGGGAGCATATGACAGTGAAGAAGCAGCAGCACATACGTACGATCTGGCTGCT |
Microexon-tag Amino Acid seq | WDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAA |
Transcript ID | AT3G54320.3 |
Gene ID | At.16422 |
Gene Name | WRI1 |
Pfam domain motif | AP2 |
Motif E-value | 6.2e-13 |
Motif start | 65 |
Motif end | 123 |
Protein seq | >AT3G54320.3 MKKRLTTSTCSSSPSSSVSSSTTTSSPIQSEAPRPKRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEA HLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSG FSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFP FPVNQANHQEGILVEAKQEVETREAKEEPREEVKQQYVEEPPQEEEEKEEEKAEQQEAEIVGYSEEAAVVNCCIDSSTIM EMDRCGDNNELAWNFCMMDTGFSPFLTDQNLANENPIEYPELFNELAFEDNIDFMFDDGKHECLNLENLDCCVVGRESPP SSSSPLSCLSTDSASSTTTTTTSVSCNYLV* |
CDS seq | >AT3G54320.3 ATGAAGAAGCGCTTAACCACTTCCACTTGTTCTTCTTCTCCATCTTCCTCTGTTTCTTCTTCTACTACTACTTCCTCTCC TATTCAGTCGGAGGCTCCAAGGCCTAAACGAGCCAAAAGGGCTAAGAAATCTTCTCCTTCTGGTGATAAATCTCATAACC CGACAAGCCCTGCTTCTACCCGACGCAGCTCTATCTACAGAGGAGTCACTAGACATAGATGGACTGGGAGATTCGAGGCT CATCTTTGGGACAAAAGCTCTTGGAATTCGATTCAGAACAAGAAAGGCAAACAAGTTTATCTGGGAGCATATGACAGTGA AGAAGCAGCAGCACATACGTACGATCTGGCTGCTCTCAAGTACTGGGGACCCGACACCATCTTGAATTTTCCGGCAGAGA CGTACACAAAGGAATTGGAAGAAATGCAGAGAGTGACAAAGGAAGAATATTTGGCTTCTCTCCGCCGCCAGAGCAGTGGT TTCTCCAGAGGCGTCTCTAAATATCGCGGCGTCGCTAGGCATCACCACAACGGAAGATGGGAGGCTCGGATCGGAAGAGT GTTTGGGAACAAGTACTTGTACCTCGGCACCTATAATACGCAGGAGGAAGCTGCTGCAGCATATGACATGGCTGCGATTG AGTATCGAGGCGCAAACGCGGTTACTAATTTCGACATTAGTAATTACATTGACCGGTTAAAGAAGAAAGGTGTTTTCCCG TTCCCTGTGAACCAAGCTAACCATCAAGAGGGTATTCTTGTTGAAGCCAAACAAGAAGTTGAAACGAGAGAAGCGAAGGA AGAGCCTAGAGAAGAAGTGAAACAACAGTACGTGGAAGAACCACCGCAAGAAGAAGAAGAGAAGGAAGAAGAGAAAGCAG AGCAACAAGAAGCAGAGATTGTAGGATATTCAGAAGAAGCAGCAGTGGTCAATTGCTGCATAGACTCTTCAACCATAATG GAAATGGATCGTTGTGGGGACAACAATGAGCTGGCTTGGAACTTCTGTATGATGGATACAGGGTTTTCTCCGTTTTTGAC TGATCAGAATCTCGCGAATGAGAATCCCATAGAGTATCCGGAGCTATTCAATGAGTTAGCATTTGAGGACAACATCGACT TCATGTTCGATGATGGGAAGCACGAGTGCTTGAACTTGGAAAATCTGGATTGTTGCGTGGTGGGAAGAGAGAGCCCACCC TCTTCTTCTTCACCATTGTCTTGCTTATCTACTGACTCTGCTTCATCAACAACAACAACAACAACCTCGGTTTCTTGTAA CTATTTGGTCTGA |