
Microexon ID | At_2:17402099-17402107:- |
Species | Arabidopsis thaliana | Coordinates | 2:17402099..17402107 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAGTACCTGGAACCAAAACCAGAACAAGAAGGGAAAACAAGTTTATCTAGGAGCATATGATGATGAAGAGGCTGCTGCTAGAGCTTACGACCTTGCTGCC |
Microexon-tag Amino Acid Seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Microexon-tag spanning region | 17401960-17402302 |
Microexon-tag prediction score | 0.975 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G41710.1x |
Reference Transcript ID | AT2G41710.1 |
Gene ID | AT2G41710 |
Gene Name | NA |
Transcript ID | AT2G41710.1 |
Protein ID | AT2G41710.1 |
Gene ID | AT2G41710 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.1e-13 |
Motif start | 70 |
Motif end | 128 |
Protein seq | >AT2G41710.1 MASVSSSDQGPKTEAGCSGGGGGESSETVAASDQMLLYRGFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWT GRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLR RKSSGFSRGIAKYRGLQSRWDASASRMPGPEYFSNIHYGAGDDRGTEGDFLGSFCLERKIDLTGYIKWWGANKNRQPESS SKASEDANVEDAGTELKTLEHTSHATEPYKAPNLGVLCGTQRKEKEISSPSSSSALSILSQSPAFKSLEEKVLKIQESCN NENDENANRNIINMEKNNGKAIEKPVVSHGVALGGAAALSLQKSMYPLTSLLTAPLLTNYNTLDPLADPILWTPFLPSGS SLTSEVTKTETSCSTYSYLPQEK* |
CDS seq | >AT2G41710.1 ATGGCGTCGGTGTCGTCGTCGGATCAAGGACCTAAGACAGAAGCAGGATGTAGCGGCGGAGGAGGAGGAGAGAGCTCGGA GACAGTGGCGGCGAGTGATCAGATGTTGTTGTATAGAGGTTTTAAGAAGGCGAAGAAGGAGAGAGGTTGTACAGCTAAGG AGCGTATTAGTAAAATGCCTCCGTGCACTGCTGGGAAAAGGAGTTCCATATACCGGGGAGTCACCAGACATAGATGGACA GGTCGTTATGAAGCTCACCTTTGGGATAAGAGTACCTGGAACCAAAACCAGAACAAGAAGGGAAAACAAGTTTATCTAGG AGCATATGATGATGAAGAGGCTGCTGCTAGAGCTTACGACCTTGCTGCCTTAAAATATTGGGGTCCTGGGACACTTATAA ATTTTCCGGTGACTGATTATACCAGGGATTTAGAAGAAATGCAAAATCTCTCAAGGGAAGAATACCTTGCATCTTTACGT AGAAAAAGCAGCGGTTTCTCTAGGGGAATAGCGAAATATCGTGGACTTCAAAGCCGATGGGACGCATCAGCCAGTCGTAT GCCTGGACCTGAATACTTCAGTAACATTCATTACGGGGCAGGTGATGATCGTGGAACAGAAGGTGACTTTCTAGGTAGCT TTTGTCTGGAAAGAAAGATTGATCTAACAGGATACATAAAGTGGTGGGGAGCCAACAAGAACCGTCAACCAGAATCTTCA TCAAAAGCATCAGAGGATGCAAACGTCGAAGATGCTGGTACTGAGCTTAAAACACTGGAACACACATCCCATGCAACAGA ACCATACAAGGCGCCAAACCTTGGCGTCCTTTGTGGAACTCAGAGAAAAGAAAAAGAAATATCATCACCATCAAGCTCTT CTGCTTTAAGCATCTTGTCTCAGTCGCCTGCCTTCAAGAGCCTAGAGGAGAAAGTGTTGAAGATCCAAGAAAGCTGCAAT AATGAAAACGATGAGAATGCAAACCGTAACATCATCAATATGGAGAAGAATAACGGCAAGGCAATAGAGAAACCAGTTGT GAGTCATGGAGTTGCTTTAGGCGGTGCTGCTGCTTTGTCTCTTCAGAAAAGCATGTACCCACTTACCTCTCTCTTAACGG CTCCATTGCTCACCAACTACAATACATTGGATCCTCTTGCAGACCCTATTCTCTGGACACCATTTCTTCCTTCAGGATCC TCTCTTACTTCAGAGGTGACAAAGACAGAGACCAGCTGTTCCACGTACAGCTACCTCCCACAAGAGAAATGA |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAGTACCTGGAACCAAAACCAGAACAAGAAGGGAAAACAAGTTTATCTAGGAGCATATGATGATGAAGAGGCTGCTGCTAGAGCTTACGACCTTGCTGCC |
Microexon-tag Amino Acid seq | WDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA |
Transcript ID | AT2G41710.1 |
Gene ID | At.11149 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.1e-13 |
Motif start | 70 |
Motif end | 128 |
Protein seq | >AT2G41710.1 MASVSSSDQGPKTEAGCSGGGGGESSETVAASDQMLLYRGFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWT GRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLR RKSSGFSRGIAKYRGLQSRWDASASRMPGPEYFSNIHYGAGDDRGTEGDFLGSFCLERKIDLTGYIKWWGANKNRQPESS SKASEDANVEDAGTELKTLEHTSHATEPYKAPNLGVLCGTQRKEKEISSPSSSSALSILSQSPAFKSLEEKVLKIQESCN NENDENANRNIINMEKNNGKAIEKPVVSHGVALGGAAALSLQKSMYPLTSLLTAPLLTNYNTLDPLADPILWTPFLPSGS SLTSEVTKTETSCSTYSYLPQEK* |
CDS seq | >AT2G41710.1 ATGGCGTCGGTGTCGTCGTCGGATCAAGGACCTAAGACAGAAGCAGGATGTAGCGGCGGAGGAGGAGGAGAGAGCTCGGA GACAGTGGCGGCGAGTGATCAGATGTTGTTGTATAGAGGTTTTAAGAAGGCGAAGAAGGAGAGAGGTTGTACAGCTAAGG AGCGTATTAGTAAAATGCCTCCGTGCACTGCTGGGAAAAGGAGTTCCATATACCGGGGAGTCACCAGACATAGATGGACA GGTCGTTATGAAGCTCACCTTTGGGATAAGAGTACCTGGAACCAAAACCAGAACAAGAAGGGAAAACAAGTTTATCTAGG AGCATATGATGATGAAGAGGCTGCTGCTAGAGCTTACGACCTTGCTGCCTTAAAATATTGGGGTCCTGGGACACTTATAA ATTTTCCGGTGACTGATTATACCAGGGATTTAGAAGAAATGCAAAATCTCTCAAGGGAAGAATACCTTGCATCTTTACGT AGAAAAAGCAGCGGTTTCTCTAGGGGAATAGCGAAATATCGTGGACTTCAAAGCCGATGGGACGCATCAGCCAGTCGTAT GCCTGGACCTGAATACTTCAGTAACATTCATTACGGGGCAGGTGATGATCGTGGAACAGAAGGTGACTTTCTAGGTAGCT TTTGTCTGGAAAGAAAGATTGATCTAACAGGATACATAAAGTGGTGGGGAGCCAACAAGAACCGTCAACCAGAATCTTCA TCAAAAGCATCAGAGGATGCAAACGTCGAAGATGCTGGTACTGAGCTTAAAACACTGGAACACACATCCCATGCAACAGA ACCATACAAGGCGCCAAACCTTGGCGTCCTTTGTGGAACTCAGAGAAAAGAAAAAGAAATATCATCACCATCAAGCTCTT CTGCTTTAAGCATCTTGTCTCAGTCGCCTGCCTTCAAGAGCCTAGAGGAGAAAGTGTTGAAGATCCAAGAAAGCTGCAAT AATGAAAACGATGAGAATGCAAACCGTAACATCATCAATATGGAGAAGAATAACGGCAAGGCAATAGAGAAACCAGTTGT GAGTCATGGAGTTGCTTTAGGCGGTGCTGCTGCTTTGTCTCTTCAGAAAAGCATGTACCCACTTACCTCTCTCTTAACGG CTCCATTGCTCACCAACTACAATACATTGGATCCTCTTGCAGACCCTATTCTCTGGACACCATTTCTTCCTTCAGGATCC TCTCTTACTTCAGAGGTGACAAAGACAGAGACCAGCTGTTCCACGTACAGCTACCTCCCACAAGAGAAATGA |