Microexon ID At_1:29993080-29993088:-
Species Arabidopsis thaliana
Coordinates 1:29993080..29993088
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TTTATCTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAAGAACAGCTGGAACGATACACAGACCAAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCA
Microexon-tag Amino Acid Seq WDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAA
Microexon-tag spanning region29992677-29993370
Microexon-tag prediction score0.9628
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G79700.1x
Reference Transcript ID AT1G79700.1
Gene ID AT1G79700
Gene Name NA
Transcript ID AT1G79700.1
Protein ID AT1G79700.1
Gene ID AT1G79700
Gene Name NA
Pfam domain motif AP2
Motif E-value 1.3e-13
Motif start 53
Motif end 110
Protein seq >AT1G79700.1
MAKVSGRSKKTIVDDEISDKTASASESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQT
KKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVAR
HHHNGRWEARIGRVFATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKPIRSPSREPESSDDNKSPK
SEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDVIFDCFNSYINPGFYNEFDYGP*
CDS seq >AT1G79700.1
ATGGCAAAAGTCTCTGGGAGGAGCAAGAAAACAATCGTTGACGATGAAATCAGCGATAAAACAGCGTCTGCGTCTGAGTC
TGCGTCCATTGCCTTAACATCCAAACGCAAACGTAAGTCGCCGCCTCGAAACGCTCCTCTTCAACGCAGCTCCCCTTACA
GAGGCGTCACAAGGCATAGATGGACTGGGAGATACGAAGCGCATTTGTGGGATAAGAACAGCTGGAACGATACACAGACC
AAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCATTGAA
GTACTGGGGACGAGACACACTCTTGAACTTCCCTTTGCCGAGTTATGACGAAGACGTCAAAGAAATGGAAGGCCAATCCA
AGGAAGAGTATATTGGATCATTGAGAAGAAAAAGTAGTGGATTTTCTCGCGGTGTATCAAAATACAGAGGCGTTGCAAGG
CATCACCATAATGGGAGATGGGAAGCTAGAATTGGAAGGGTGTTTGCCACGCAAGAAGAAGCAGCAATCGCCTACGACAT
CGCGGCAATAGAGTACCGTGGACTTAACGCCGTTACCAATTTCGACGTCAGCCGTTATCTAAACCCTAACGCCGCCGCGG
ATAAAGCCGATTCCGATTCTAAGCCCATTCGAAGCCCTAGTCGCGAGCCCGAATCGTCGGATGATAACAAATCTCCGAAA
TCAGAGGAAGTAATCGAACCATCTACATCGCCGGAAGTGATTCCAACTCGCCGGAGCTTCCCCGACGATATCCAGACGTA
TTTTGGGTGTCAAGATTCCGGCAAGTTAGCGACTGAGGAAGACGTAATATTCGATTGTTTCAATTCTTATATAAATCCTG
GCTTCTATAACGAGTTTGATTATGGACCTTAA
Microexon DNA seq TTTATCTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAAGAACAGCTGGAACGATACACAGACCAAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCA
Microexon-tag Amino Acid seq WDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAA
Transcript ID AT1G79700.1
Gene ID At.7270
Gene Name NA
Pfam domain motif AP2
Motif E-value 1.3e-13
Motif start 53
Motif end 110
Protein seq >AT1G79700.1
MAKVSGRSKKTIVDDEISDKTASASESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQT
KKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVAR
HHHNGRWEARIGRVFATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKPIRSPSREPESSDDNKSPK
SEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDVIFDCFNSYINPGFYNEFDYGP*
CDS seq >AT1G79700.1
ATGGCAAAAGTCTCTGGGAGGAGCAAGAAAACAATCGTTGACGATGAAATCAGCGATAAAACAGCGTCTGCGTCTGAGTC
TGCGTCCATTGCCTTAACATCCAAACGCAAACGTAAGTCGCCGCCTCGAAACGCTCCTCTTCAACGCAGCTCCCCTTACA
GAGGCGTCACAAGGCATAGATGGACTGGGAGATACGAAGCGCATTTGTGGGATAAGAACAGCTGGAACGATACACAGACC
AAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCATTGAA
GTACTGGGGACGAGACACACTCTTGAACTTCCCTTTGCCGAGTTATGACGAAGACGTCAAAGAAATGGAAGGCCAATCCA
AGGAAGAGTATATTGGATCATTGAGAAGAAAAAGTAGTGGATTTTCTCGCGGTGTATCAAAATACAGAGGCGTTGCAAGG
CATCACCATAATGGGAGATGGGAAGCTAGAATTGGAAGGGTGTTTGCCACGCAAGAAGAAGCAGCAATCGCCTACGACAT
CGCGGCAATAGAGTACCGTGGACTTAACGCCGTTACCAATTTCGACGTCAGCCGTTATCTAAACCCTAACGCCGCCGCGG
ATAAAGCCGATTCCGATTCTAAGCCCATTCGAAGCCCTAGTCGCGAGCCCGAATCGTCGGATGATAACAAATCTCCGAAA
TCAGAGGAAGTAATCGAACCATCTACATCGCCGGAAGTGATTCCAACTCGCCGGAGCTTCCCCGACGATATCCAGACGTA
TTTTGGGTGTCAAGATTCCGGCAAGTTAGCGACTGAGGAAGACGTAATATTCGATTGTTTCAATTCTTATATAAATCCTG
GCTTCTATAACGAGTTTGATTATGGACCTTAA