
Microexon ID | At_1:29993080-29993088:- |
Species | Arabidopsis thaliana | Coordinates | 1:29993080..29993088 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACAGCTGGAACGATACACAGACCAAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCA |
Microexon-tag Amino Acid Seq | WDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAA |
Microexon-tag spanning region | 29992677-29993370 |
Microexon-tag prediction score | 0.9628 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G79700.1x |
Reference Transcript ID | AT1G79700.1 |
Gene ID | AT1G79700 |
Gene Name | NA |
Transcript ID | AT1G79700.1 |
Protein ID | AT1G79700.1 |
Gene ID | AT1G79700 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-13 |
Motif start | 53 |
Motif end | 110 |
Protein seq | >AT1G79700.1 MAKVSGRSKKTIVDDEISDKTASASESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQT KKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVAR HHHNGRWEARIGRVFATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKPIRSPSREPESSDDNKSPK SEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDVIFDCFNSYINPGFYNEFDYGP* |
CDS seq | >AT1G79700.1 ATGGCAAAAGTCTCTGGGAGGAGCAAGAAAACAATCGTTGACGATGAAATCAGCGATAAAACAGCGTCTGCGTCTGAGTC TGCGTCCATTGCCTTAACATCCAAACGCAAACGTAAGTCGCCGCCTCGAAACGCTCCTCTTCAACGCAGCTCCCCTTACA GAGGCGTCACAAGGCATAGATGGACTGGGAGATACGAAGCGCATTTGTGGGATAAGAACAGCTGGAACGATACACAGACC AAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCATTGAA GTACTGGGGACGAGACACACTCTTGAACTTCCCTTTGCCGAGTTATGACGAAGACGTCAAAGAAATGGAAGGCCAATCCA AGGAAGAGTATATTGGATCATTGAGAAGAAAAAGTAGTGGATTTTCTCGCGGTGTATCAAAATACAGAGGCGTTGCAAGG CATCACCATAATGGGAGATGGGAAGCTAGAATTGGAAGGGTGTTTGCCACGCAAGAAGAAGCAGCAATCGCCTACGACAT CGCGGCAATAGAGTACCGTGGACTTAACGCCGTTACCAATTTCGACGTCAGCCGTTATCTAAACCCTAACGCCGCCGCGG ATAAAGCCGATTCCGATTCTAAGCCCATTCGAAGCCCTAGTCGCGAGCCCGAATCGTCGGATGATAACAAATCTCCGAAA TCAGAGGAAGTAATCGAACCATCTACATCGCCGGAAGTGATTCCAACTCGCCGGAGCTTCCCCGACGATATCCAGACGTA TTTTGGGTGTCAAGATTCCGGCAAGTTAGCGACTGAGGAAGACGTAATATTCGATTGTTTCAATTCTTATATAAATCCTG GCTTCTATAACGAGTTTGATTATGGACCTTAA |
Microexon DNA seq | TTTATCTAG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAAGAACAGCTGGAACGATACACAGACCAAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCA |
Microexon-tag Amino Acid seq | WDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAA |
Transcript ID | AT1G79700.1 |
Gene ID | At.7270 |
Gene Name | NA |
Pfam domain motif | AP2 |
Motif E-value | 1.3e-13 |
Motif start | 53 |
Motif end | 110 |
Protein seq | >AT1G79700.1 MAKVSGRSKKTIVDDEISDKTASASESASIALTSKRKRKSPPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQT KKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVAR HHHNGRWEARIGRVFATQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKPIRSPSREPESSDDNKSPK SEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQDSGKLATEEDVIFDCFNSYINPGFYNEFDYGP* |
CDS seq | >AT1G79700.1 ATGGCAAAAGTCTCTGGGAGGAGCAAGAAAACAATCGTTGACGATGAAATCAGCGATAAAACAGCGTCTGCGTCTGAGTC TGCGTCCATTGCCTTAACATCCAAACGCAAACGTAAGTCGCCGCCTCGAAACGCTCCTCTTCAACGCAGCTCCCCTTACA GAGGCGTCACAAGGCATAGATGGACTGGGAGATACGAAGCGCATTTGTGGGATAAGAACAGCTGGAACGATACACAGACC AAGAAAGGACGTCAAGTTTATCTAGGGGCTTACGACGAAGAAGAAGCAGCAGCACGTGCCTACGACTTAGCAGCATTGAA GTACTGGGGACGAGACACACTCTTGAACTTCCCTTTGCCGAGTTATGACGAAGACGTCAAAGAAATGGAAGGCCAATCCA AGGAAGAGTATATTGGATCATTGAGAAGAAAAAGTAGTGGATTTTCTCGCGGTGTATCAAAATACAGAGGCGTTGCAAGG CATCACCATAATGGGAGATGGGAAGCTAGAATTGGAAGGGTGTTTGCCACGCAAGAAGAAGCAGCAATCGCCTACGACAT CGCGGCAATAGAGTACCGTGGACTTAACGCCGTTACCAATTTCGACGTCAGCCGTTATCTAAACCCTAACGCCGCCGCGG ATAAAGCCGATTCCGATTCTAAGCCCATTCGAAGCCCTAGTCGCGAGCCCGAATCGTCGGATGATAACAAATCTCCGAAA TCAGAGGAAGTAATCGAACCATCTACATCGCCGGAAGTGATTCCAACTCGCCGGAGCTTCCCCGACGATATCCAGACGTA TTTTGGGTGTCAAGATTCCGGCAAGTTAGCGACTGAGGAAGACGTAATATTCGATTGTTTCAATTCTTATATAAATCCTG GCTTCTATAACGAGTTTGATTATGGACCTTAA |