
Microexon ID | At_1:27332550-27332558:+ |
Species | Arabidopsis thaliana | Coordinates | 1:27332550..27332558 |
Microexon Cluster ID | MEP21 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | AP2 |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGCTGTAAGAAGGAGGGACAGACAAGGAGAGGAAGACAAGTGTATCTTGGAGGGTATGATGAGGAGGAGAAAGCAGCGAGGGCATATGATTTAGCGGCT |
Microexon-tag Amino Acid Seq | WDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAA |
Microexon-tag spanning region | 27332375-27332764 |
Microexon-tag prediction score | 0.9655 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT1G72570.1x |
Reference Transcript ID | AT1G72570.1 |
Gene ID | AT1G72570 |
Gene Name | AIL1 |
Transcript ID | AT1G72570.1 |
Protein ID | AT1G72570.1 |
Gene ID | AT1G72570 |
Gene Name | AIL1 |
Pfam domain motif | AP2 |
Motif E-value | 1.1e-13 |
Motif start | 223 |
Motif end | 281 |
Protein seq | >AT1G72570.1 MKKWLGFSLTPPLRICNSEEEELRHDGSDVWRYDINFDHHHHDEDVPKVEDLLSNSHQTEYPINHNQTNVNCTTVVNRLN PPGYLLHDQTVVTPHYPNLDPNLSNDYGGFERVGSVSVFKSWLEQGTPAFPLSSHYVTEEAGTSNNISHFSNEETGYNTN GSMLSLALSHGACSDLINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHL WDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFS RGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTIVD SDQAKHSPTSSGAGH* |
CDS seq | >AT1G72570.1 ATGAAGAAATGGTTGGGATTTTCATTGACACCTCCTTTGAGAATCTGCAATAGTGAAGAAGAAGAACTTAGGCATGACGG TTCCGATGTTTGGAGATATGATATTAACTTTGATCATCATCATCATGATGAAGACGTTCCAAAGGTGGAAGATCTCCTCT CAAACTCTCATCAAACCGAGTATCCTATAAACCATAACCAAACCAATGTCAACTGCACCACTGTGGTTAACAGGTTAAAC CCACCCGGTTACCTTCTCCACGACCAAACCGTAGTTACACCACATTACCCGAACCTAGATCCGAACCTTAGCAATGATTA TGGAGGTTTTGAGAGGGTCGGTTCGGTCTCGGTTTTCAAATCTTGGTTAGAGCAAGGCACTCCAGCATTCCCACTCTCGA GTCATTACGTTACTGAAGAGGCTGGTACGAGCAATAATATTAGTCATTTTAGTAACGAAGAGACTGGTTATAACACCAAT GGCTCAATGCTATCATTGGCTTTGAGCCATGGGGCTTGTTCTGATTTGATCAACGAATCGAATGTATCCGCACGGGTCGA AGAACCGGTTAAGGTAGATGAGAAGCGGAAGAGATTGGTTGTTAAACCTCAGGTAAAGGAATCCGTTCCTCGGAAGTCGG TTGATAGTTATGGACAAAGAACTTCTCAGTATCGTGGAGTTACAAGGCATAGATGGACAGGGAGATATGAAGCTCACTTA TGGGATAATAGCTGTAAGAAGGAGGGACAGACAAGGAGAGGAAGACAAGTGTATCTTGGAGGGTATGATGAGGAGGAGAA AGCAGCGAGGGCATATGATTTAGCGGCTCTGAAGTATTGGGGTCCTACCACTCACTTAAATTTCCCTTTGAGTAATTACG AAAAGGAGATCGAGGAACTCAATAACATGAATCGGCAAGAATTTGTTGCCATGTTGAGGAGGAATAGCAGCGGGTTTTCG AGGGGAGCTTCCGTGTATAGAGGAGTTACAAGGCATCATCAACATGGAAGGTGGCAAGCCAGAATTGGAAGAGTTGCTGG AAACAAGGACTTGTACCTTGGAACATTTAGCACGCAAGAAGAAGCAGCGGAGGCGTACGATATCGCGGCAATTAAATTCA GAGGCCTAAACGCTGTAACCAATTTCGATATAAATAGATATGACGTGAAGAGGATATGTTCAAGCTCAACGATTGTTGAT AGCGACCAGGCCAAACATTCTCCCACCAGCTCTGGCGCCGGCCACTAA |
Microexon DNA seq | TGTATCTTG |
Microexon Amino Acid seq | VYLG |
Microexon-tag DNA Seq | TGGGATAATAGCTGTAAGAAGGAGGGACAGACAAGGAGAGGAAGACAAGTGTATCTTGGAGGGTATGATGAGGAGGAGAAAGCAGCGAGGGCATATGATTTAGCGGCT |
Microexon-tag Amino Acid seq | WDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAA |
Transcript ID | AT1G72570.1 |
Gene ID | At.6471 |
Gene Name | AIL1 |
Pfam domain motif | AP2 |
Motif E-value | 1.1e-13 |
Motif start | 223 |
Motif end | 281 |
Protein seq | >AT1G72570.1 MKKWLGFSLTPPLRICNSEEEELRHDGSDVWRYDINFDHHHHDEDVPKVEDLLSNSHQTEYPINHNQTNVNCTTVVNRLN PPGYLLHDQTVVTPHYPNLDPNLSNDYGGFERVGSVSVFKSWLEQGTPAFPLSSHYVTEEAGTSNNISHFSNEETGYNTN GSMLSLALSHGACSDLINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHL WDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFS RGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTIVD SDQAKHSPTSSGAGH* |
CDS seq | >AT1G72570.1 ATGAAGAAATGGTTGGGATTTTCATTGACACCTCCTTTGAGAATCTGCAATAGTGAAGAAGAAGAACTTAGGCATGACGG TTCCGATGTTTGGAGATATGATATTAACTTTGATCATCATCATCATGATGAAGACGTTCCAAAGGTGGAAGATCTCCTCT CAAACTCTCATCAAACCGAGTATCCTATAAACCATAACCAAACCAATGTCAACTGCACCACTGTGGTTAACAGGTTAAAC CCACCCGGTTACCTTCTCCACGACCAAACCGTAGTTACACCACATTACCCGAACCTAGATCCGAACCTTAGCAATGATTA TGGAGGTTTTGAGAGGGTCGGTTCGGTCTCGGTTTTCAAATCTTGGTTAGAGCAAGGCACTCCAGCATTCCCACTCTCGA GTCATTACGTTACTGAAGAGGCTGGTACGAGCAATAATATTAGTCATTTTAGTAACGAAGAGACTGGTTATAACACCAAT GGCTCAATGCTATCATTGGCTTTGAGCCATGGGGCTTGTTCTGATTTGATCAACGAATCGAATGTATCCGCACGGGTCGA AGAACCGGTTAAGGTAGATGAGAAGCGGAAGAGATTGGTTGTTAAACCTCAGGTAAAGGAATCCGTTCCTCGGAAGTCGG TTGATAGTTATGGACAAAGAACTTCTCAGTATCGTGGAGTTACAAGGCATAGATGGACAGGGAGATATGAAGCTCACTTA TGGGATAATAGCTGTAAGAAGGAGGGACAGACAAGGAGAGGAAGACAAGTGTATCTTGGAGGGTATGATGAGGAGGAGAA AGCAGCGAGGGCATATGATTTAGCGGCTCTGAAGTATTGGGGTCCTACCACTCACTTAAATTTCCCTTTGAGTAATTACG AAAAGGAGATCGAGGAACTCAATAACATGAATCGGCAAGAATTTGTTGCCATGTTGAGGAGGAATAGCAGCGGGTTTTCG AGGGGAGCTTCCGTGTATAGAGGAGTTACAAGGCATCATCAACATGGAAGGTGGCAAGCCAGAATTGGAAGAGTTGCTGG AAACAAGGACTTGTACCTTGGAACATTTAGCACGCAAGAAGAAGCAGCGGAGGCGTACGATATCGCGGCAATTAAATTCA GAGGCCTAAACGCTGTAACCAATTTCGATATAAATAGATATGACGTGAAGAGGATATGTTCAAGCTCAACGATTGTTGAT AGCGACCAGGCCAAACATTCTCCCACCAGCTCTGGCGCCGGCCACTAA |