Microexon ID At_1:18978680-18978688:+
Species Arabidopsis thaliana
Coordinates 1:18978680..18978688
Microexon Cluster ID MEP21
Size 9
Phase 1
Pfam Domain Motif AP2
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq TGGGAYAAYAGYWSYWGRARWGARRGYCARAVYARGAARGGAARRCAAGTTTAYYTRGGKGSWTATGAYRAKGARGARRMWGCWGCWMGRGCWTATGAYYTDGCWGCW
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TCTACTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGCTGTAGAAGAGAAGGACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCCAGAGCATATGATCTAGCTGCA
Microexon-tag Amino Acid Seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Microexon-tag spanning region18978478-18978844
Microexon-tag prediction score0.9659
Overlapped with the annotated transcript (%) 100
New Transcript ID AT1G51190.1x
Reference Transcript ID AT1G51190.1
Gene ID AT1G51190
Gene Name PLT2
Transcript ID AT1G51190.1
Protein ID AT1G51190.1
Gene ID AT1G51190
Gene Name PLT2
Pfam domain motif AP2
Motif E-value 4.4e-13
Motif start 190
Motif end 248
Protein seq >AT1G51190.1
MNSNNWLAFPLSPTHSSLPPHIHSSQNSHFNLGLVNDNIDNPFQNQGWNMINPHGGGGEGGEVPKVADFLGVSKSGDHHT
DHNLVPYNDIHQTNASDYYFQTNSLLPTVVTCASNAPNNYELQESAHNLQSLTLSMGSTGAAAAEVATVKASPAETSADN
SSSTTNTSGGAIVEATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYD
LAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYL
GTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQY
GAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDISQYHDSFSYIQTQLHLHQQQTNNYLQSSSHTSQL
YNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGSSSTVGSSAEEEFPAVKVDYDMPPSGGATGYGGWNSGESAQGSNPG
GVFTMWNE*
CDS seq >AT1G51190.1
ATGAATTCTAACAACTGGCTCGCGTTCCCTCTATCACCAACTCACTCTTCTTTGCCGCCTCACATTCACTCTTCACAAAA
TTCTCATTTCAATCTAGGTTTGGTCAACGACAATATCGACAACCCTTTTCAAAACCAAGGATGGAATATGATCAATCCAC
ATGGTGGAGGCGGCGAAGGTGGAGAGGTTCCAAAAGTGGCTGATTTCTTAGGAGTGAGCAAATCGGGGGATCATCACACC
GATCACAACCTCGTACCTTATAACGACATTCATCAAACCAACGCCTCCGACTACTACTTTCAAACCAATAGCTTGTTACC
TACAGTCGTCACTTGTGCCTCTAATGCTCCTAATAATTATGAGCTTCAAGAGAGTGCACACAATTTGCAATCTCTCACTC
TCTCTATGGGAAGTACTGGAGCTGCCGCTGCAGAAGTCGCCACTGTGAAAGCCTCGCCGGCTGAGACTAGTGCCGATAAT
AGTAGCAGCACTACCAACACAAGTGGAGGAGCCATCGTTGAGGCTACACCGAGACGGACTTTGGAAACTTTTGGACAACG
AACCTCTATCTATCGTGGAGTTACAAGACATAGATGGACCGGTAGATATGAAGCTCATCTTTGGGATAATAGCTGTAGAA
GAGAAGGACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCCAGAGCATATGAT
CTAGCTGCACTTAAATATTGGGGTCCCTCTACTACTACCAACTTTCCGATAACTAACTACGAGAAGGAAGTAGAGGAGAT
GAAAAACATGACGAGACAAGAGTTTGTGGCTTCTATAAGAAGGAAAAGTAGCGGATTCTCGCGTGGTGCATCCATGTATC
GTGGAGTAACAAGGCATCATCAACATGGAAGATGGCAAGCAAGGATCGGCCGAGTTGCTGGAAACAAAGATCTCTACTTG
GGAACATTCAGCACGGAGGAAGAAGCAGCAGAAGCTTATGACATAGCTGCGATAAAGTTTCGAGGTCTAAACGCGGTTAC
AAACTTTGAGATAAATCGGTATGATGTGAAAGCCATCCTGGAGAGCAACACACTTCCTATAGGAGGTGGTGCGGCTAAAC
GGCTCAAAGAAGCTCAAGCTCTAGAATCATCAAGAAAACGAGAGGAAATGATAGCCCTCGGATCAAATTTCCATCAATAT
GGTGCAGCGAGCGGCTCGAGCTCTGTTGCTTCCAGCTCTAGGCTTCAGCTTCAACCTTACCCTCTAAGCATTCAACAACC
TTTTGAGCATCTTCATCATCATCAGCCTTTACTTACTCTACAGAACAACAACGATATCTCTCAGTATCATGATTCCTTTA
GTTACATTCAGACGCAGCTTCATCTTCACCAACAACAAACCAACAATTACTTGCAGTCTTCTAGTCACACTTCACAGCTC
TACAATGCTTATCTTCAGAGTAACCCTGGTCTGCTTCATGGATTTGTCTCTGATAATAACAACACTTCAGGGTTTCTTGG
AAACAATGGGATTGGTATTGGGTCAAGCTCTACCGTTGGATCATCGGCTGAGGAAGAGTTTCCAGCCGTGAAAGTCGATT
ACGATATGCCTCCTTCCGGTGGAGCTACAGGGTATGGAGGATGGAATAGTGGAGAGTCTGCTCAAGGATCGAATCCAGGA
GGTGTTTTCACGATGTGGAATGAATAA
Microexon DNA seq TCTACTTAG
Microexon Amino Acid seq VYLG
Microexon-tag DNA Seq TGGGATAATAGCTGTAGAAGAGAAGGACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCCAGAGCATATGATCTAGCTGCA
Microexon-tag Amino Acid seq WDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAA
Transcript ID AT1G51190.1
Gene ID At.4323
Gene Name PLT2
Pfam domain motif AP2
Motif E-value 4.4e-13
Motif start 190
Motif end 248
Protein seq >AT1G51190.1
MNSNNWLAFPLSPTHSSLPPHIHSSQNSHFNLGLVNDNIDNPFQNQGWNMINPHGGGGEGGEVPKVADFLGVSKSGDHHT
DHNLVPYNDIHQTNASDYYFQTNSLLPTVVTCASNAPNNYELQESAHNLQSLTLSMGSTGAAAAEVATVKASPAETSADN
SSSTTNTSGGAIVEATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYD
LAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYL
GTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQY
GAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDISQYHDSFSYIQTQLHLHQQQTNNYLQSSSHTSQL
YNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGSSSTVGSSAEEEFPAVKVDYDMPPSGGATGYGGWNSGESAQGSNPG
GVFTMWNE*
CDS seq >AT1G51190.1
ATGAATTCTAACAACTGGCTCGCGTTCCCTCTATCACCAACTCACTCTTCTTTGCCGCCTCACATTCACTCTTCACAAAA
TTCTCATTTCAATCTAGGTTTGGTCAACGACAATATCGACAACCCTTTTCAAAACCAAGGATGGAATATGATCAATCCAC
ATGGTGGAGGCGGCGAAGGTGGAGAGGTTCCAAAAGTGGCTGATTTCTTAGGAGTGAGCAAATCGGGGGATCATCACACC
GATCACAACCTCGTACCTTATAACGACATTCATCAAACCAACGCCTCCGACTACTACTTTCAAACCAATAGCTTGTTACC
TACAGTCGTCACTTGTGCCTCTAATGCTCCTAATAATTATGAGCTTCAAGAGAGTGCACACAATTTGCAATCTCTCACTC
TCTCTATGGGAAGTACTGGAGCTGCCGCTGCAGAAGTCGCCACTGTGAAAGCCTCGCCGGCTGAGACTAGTGCCGATAAT
AGTAGCAGCACTACCAACACAAGTGGAGGAGCCATCGTTGAGGCTACACCGAGACGGACTTTGGAAACTTTTGGACAACG
AACCTCTATCTATCGTGGAGTTACAAGACATAGATGGACCGGTAGATATGAAGCTCATCTTTGGGATAATAGCTGTAGAA
GAGAAGGACAATCAAGGAAAGGAAGACAAGTCTACTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCCAGAGCATATGAT
CTAGCTGCACTTAAATATTGGGGTCCCTCTACTACTACCAACTTTCCGATAACTAACTACGAGAAGGAAGTAGAGGAGAT
GAAAAACATGACGAGACAAGAGTTTGTGGCTTCTATAAGAAGGAAAAGTAGCGGATTCTCGCGTGGTGCATCCATGTATC
GTGGAGTAACAAGGCATCATCAACATGGAAGATGGCAAGCAAGGATCGGCCGAGTTGCTGGAAACAAAGATCTCTACTTG
GGAACATTCAGCACGGAGGAAGAAGCAGCAGAAGCTTATGACATAGCTGCGATAAAGTTTCGAGGTCTAAACGCGGTTAC
AAACTTTGAGATAAATCGGTATGATGTGAAAGCCATCCTGGAGAGCAACACACTTCCTATAGGAGGTGGTGCGGCTAAAC
GGCTCAAAGAAGCTCAAGCTCTAGAATCATCAAGAAAACGAGAGGAAATGATAGCCCTCGGATCAAATTTCCATCAATAT
GGTGCAGCGAGCGGCTCGAGCTCTGTTGCTTCCAGCTCTAGGCTTCAGCTTCAACCTTACCCTCTAAGCATTCAACAACC
TTTTGAGCATCTTCATCATCATCAGCCTTTACTTACTCTACAGAACAACAACGATATCTCTCAGTATCATGATTCCTTTA
GTTACATTCAGACGCAGCTTCATCTTCACCAACAACAAACCAACAATTACTTGCAGTCTTCTAGTCACACTTCACAGCTC
TACAATGCTTATCTTCAGAGTAACCCTGGTCTGCTTCATGGATTTGTCTCTGATAATAACAACACTTCAGGGTTTCTTGG
AAACAATGGGATTGGTATTGGGTCAAGCTCTACCGTTGGATCATCGGCTGAGGAAGAGTTTCCAGCCGTGAAAGTCGATT
ACGATATGCCTCCTTCCGGTGGAGCTACAGGGTATGGAGGATGGAATAGTGGAGAGTCTGCTCAAGGATCGAATCCAGGA
GGTGTTTTCACGATGTGGAATGAATAA