
Microexon ID | Vv_10:424510-424517:+ |
Species | Vistis vinifera | Coordinates | 10:424510..424517 |
Microexon Cluster ID | MEP20 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | VSP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 16,34,8,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | TWTRTTCCKGGMARAGATSAAAATGGAARYTWYSYRCCHYTRMAGWYRAGHHMARRWGGWWTAKCWRGTGGWGYYATWGCTGGMATATCTRTWGSWGGAGTWRCHGGK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Vv_10:424510-424517:+ does not have available information here.
Vv_10:424510-424517:+ does not have available information here.
Microexon DNA seq | TCAAAATG |
Microexon Amino Acid seq | SQNG |
Microexon-tag DNA Seq | TTTATCCCTGGAAAAGATCAAAATGGAAGCTACCCGCCATTGAAGTTGAGTCAAAATGGAATCTCAGTTGGAGTGATTGCTGGCATATCTGTGGCTGGAGTAGCAGGG |
Microexon-tag Amino Acid seq | FIPGKDQNGSYPPLKLSQNGISVGVIAGISVAGVAG |
Transcript ID | Vv.1874.7 |
Gene ID | Vv.1874 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Vv.1874.7 MLVFRISRFELMLVFSVLIFLSIGVESKCSRGCDLALASYNIWNGTTLSFIATAFSTSISEIQSFNPQINDIDLIIVDTR LNIPFSCSCIDGEFLGHTFFYSVDSNDTYNIIARTFYANLTTVEWLERFNRYEATEIPVNAIINVTVNCSCGNSRVSKKY GLFVTYPLQPGESLSSIANESGLPSKLLQDYNPGVDFSLGSGLVFIPGKDQNGSYPPLKLSQNGISVGVIAGISVAGVAG SLLLAFVLYVGIYKRKMGKAPLLPAAFEDQHMQPGQGYGSTLEKTSDSVALVAAVSLELVGITADKSVEFTYEELAKATN NFSAASKIGQGGFALVYYAELQGQKAAIKKMDMQASKEFLAELKVLTHVHHFNLVRLIGYCVTGSLFIVYEYIENGNLSQ HLRGSGNDPLPWSTRVQIALDAARGLEYIHEHTVPVYVHRDIKSANILIDKNLRAKVADFGLTKLTVAGSSSLPTRLVGT FGYMPPEYAQFGAVTPKIDVYAFGVVLYELISAKEAIIKTNGSTTTEARGLVALFENVLSWPDLREDFCELIDHRLGNDY PLDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTEDWDVRSVYENKALVNLMSGR* |
CDS seq | >Vv.1874.7 ATGTTGGTTTTTAGAATCTCAAGGTTTGAATTGATGTTAGTGTTTTCTGTGTTGATATTTCTCAGTATTGGAGTAGAATC TAAGTGTAGCAGAGGCTGTGATCTTGCTTTAGCTTCATACAATATATGGAATGGTACAACTCTCAGTTTTATAGCCACCG CCTTCTCCACTTCTATTTCTGAAATTCAAAGCTTCAATCCTCAAATAAATGATATAGATTTGATCATAGTTGATACAAGA TTGAATATCCCCTTCTCCTGCAGTTGCATTGATGGGGAGTTTCTGGGTCATACTTTCTTCTACTCTGTTGACAGTAATGA TACCTACAATATTATTGCTAGGACTTTCTATGCAAACCTTACTACTGTTGAATGGTTAGAGAGATTTAATAGGTATGAAG CCACTGAGATACCTGTCAACGCCATAATAAATGTTACTGTGAATTGTTCTTGTGGAAATAGTAGAGTCTCCAAGAAGTAT GGGTTGTTTGTGACCTACCCTCTTCAGCCTGGTGAGAGCTTGTCCTCTATTGCCAATGAGTCTGGACTTCCTTCCAAGTT GTTGCAGGATTACAACCCTGGAGTTGATTTCAGCCTTGGTAGTGGGTTGGTGTTTATCCCTGGAAAAGATCAAAATGGAA GCTACCCGCCATTGAAGTTGAGTCAAAATGGAATCTCAGTTGGAGTGATTGCTGGCATATCTGTGGCTGGAGTAGCAGGG TCTTTGCTCTTGGCATTTGTTCTATATGTTGGAATTTATAAGAGGAAGATGGGAAAGGCACCACTTCTCCCAGCAGCATT TGAAGACCAACATATGCAACCTGGACAGGGTTATGGAAGTACCTTGGAAAAAACTTCAGATTCAGTTGCTCTGGTTGCTG CTGTTTCTCTGGAGCTTGTTGGTATAACTGCAGACAAATCAGTGGAGTTCACATATGAAGAGCTGGCCAAGGCTACAAAT AACTTTAGTGCAGCTAGTAAGATTGGCCAAGGCGGTTTTGCATTAGTTTACTATGCGGAGCTGCAAGGCCAGAAGGCTGC AATCAAGAAGATGGACATGCAGGCATCAAAGGAGTTCCTTGCTGAACTAAAAGTTCTAACACATGTCCATCACTTCAACC TGGTTCGCCTGATAGGATATTGTGTTACGGGTTCCTTATTCATCGTCTATGAGTACATTGAGAATGGCAACTTAAGCCAA CATTTGCGTGGTTCAGGGAATGATCCATTGCCATGGTCTACTAGGGTCCAAATCGCCCTTGATGCAGCCAGAGGGCTTGA ATATATTCATGAGCACACTGTCCCTGTGTATGTACATCGTGATATTAAATCAGCGAACATTTTGATAGACAAAAACTTGC GTGCAAAGGTTGCAGATTTTGGATTAACCAAACTGACTGTAGCTGGAAGTTCTTCATTGCCCACTCGTCTTGTTGGTACA TTTGGATACATGCCTCCAGAATATGCTCAATTTGGTGCAGTTACCCCCAAGATAGATGTATATGCTTTTGGGGTTGTCCT ATATGAACTTATATCTGCCAAAGAAGCCATTATCAAGACAAATGGATCTACTACCACTGAAGCAAGAGGACTTGTTGCCT TGTTTGAGAATGTTCTCAGTTGGCCGGATCTGAGAGAAGATTTCTGTGAACTTATTGACCACAGACTTGGCAATGACTAC CCACTTGACTTAATTTGGAAGATGGCCCAGCTTGCCAAAGCTTGCACACAAGAAGATCCTCAACTGAGACCAAGCATGCA GTCAGTAGTTGTCGCACTAATGACGCTTTCATCCTCGACTGAAGATTGGGATGTCAGATCCGTGTATGAAAACAAAGCTC TAGTGAATCTGATGTCAGGAAGATAG |