
Microexon ID | Gm_20:12622223-12622230:+ |
Species | Glycine max | Coordinates | 20:12622223..12622230 |
Microexon Cluster ID | MEP20 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | VSP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 16,34,8,50 |
Microexon location in the Microexon-tag | 3 |
Microexon-tag DNA Seq | TWTRTTCCKGGMARAGATSAAAATGGAARYTWYSYRCCHYTRMAGWYRAGHHMARRWGGWWTAKCWRGTGGWGYYATWGCTGGMATATCTRTWGSWGGAGTWRCHGGK |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TTCAGGAG |
Microexon Amino Acid seq | SSGG |
Microexon-tag DNA Seq | TATGTTCCCGGAAAAGATCAAAATGGTAGCTTTGTGCGTTTGCCGTCTAGTTCAGGAGGTCTTACTGGTAGAGCTATTGCAGGAATAGCTGTCGGAATTGTGGCAGCT |
Microexon-tag Amino Acid Seq | YVPGKDQNGSFVRLPSSSGGLTGRAIAGIAVGIVAA |
Microexon-tag spanning region | 12621010-12622415 |
Microexon-tag prediction score | 0.9022 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRG89893x |
Reference Transcript ID | KRG89893 |
Gene ID | GLYMA_20G054500 |
Gene Name | NA |
Transcript ID | KRG89893 |
Protein ID | KRG89893 |
Gene ID | GLYMA_20G054500 |
Gene Name | NA |
Pfam domain motif | SKG6 |
Motif E-value | 0.38 |
Motif start | 218 |
Motif end | 254 |
Protein seq | >KRG89893 MEALRLAYLLLPWWLVFSTAESACKEGCGVALGSYYLWRGSNLTYISSIMASSLLTTPDDIVNYNKDTVPSKDIIIADQR VNVPFPCDCIDGQFLGHTFRYDVQSQDTYETVARSWFANLTDVAWLRRFNTYPPDNIPDTGTLNVTVNCSCGNTDVANYG LFVTYPLRIGDTLGSVAANLSLDSALLQRYNPDVNFNQGTGLVYVPGKDQNGSFVRLPSSSGGLTGRAIAGIAVGIVAAL LLLGVCIYVGYFRKKIQKDEFLPRDSTALFAQDGKDETSRSSANETSGPGGPAIITDITVNKSVEFSYEELATATDNFSL ANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELNVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRG SGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFG YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSVADSKGLVALFDGVLSQPDPTEELCKLVDPRLGDNYPID SVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR* |
CDS seq | >KRG89893 ATGGAAGCCTTGAGGTTGGCGTATCTCCTCCTTCCCTGGTGGTTGGTGTTTTCGACAGCAGAATCGGCGTGCAAGGAGGG CTGTGGAGTGGCACTAGGCTCCTACTACTTATGGCGGGGCTCCAACCTCACCTACATCTCCTCCATCATGGCCTCCAGCC TTCTGACAACTCCGGACGACATAGTCAACTACAACAAGGACACCGTGCCCAGCAAGGACATCATCATCGCCGACCAAAGG GTCAACGTCCCCTTCCCCTGCGACTGCATCGACGGCCAGTTTCTTGGCCACACCTTCCGCTATGACGTTCAGTCACAGGA CACGTACGAGACTGTAGCCAGGAGCTGGTTTGCCAACCTCACCGACGTGGCCTGGCTGAGGAGGTTCAATACCTATCCTC CCGACAACATTCCCGACACGGGAACGCTGAATGTTACGGTTAATTGCTCTTGTGGGAACACTGATGTTGCCAATTATGGC TTGTTCGTTACCTACCCTCTTAGGATTGGGGACACTCTGGGGTCGGTGGCTGCTAATTTGAGCCTTGACTCGGCCTTGCT GCAGAGGTACAATCCCGATGTCAATTTCAACCAGGGGACTGGTCTGGTTTATGTTCCCGGAAAAGATCAAAATGGTAGCT TTGTGCGTTTGCCGTCTAGTTCAGGAGGTCTTACTGGTAGAGCTATTGCAGGAATAGCTGTCGGAATTGTGGCAGCTCTT CTGTTATTGGGAGTTTGTATATATGTTGGATATTTCCGTAAGAAGATACAGAAGGATGAATTTCTTCCACGAGATTCCAC TGCACTCTTTGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTAGTGCAAATGAAACTTCAGGACCTGGTGGACCTGCCA TCATCACAGACATAACAGTGAACAAATCAGTGGAATTTTCATATGAGGAACTGGCAACCGCCACGGATAACTTCAGTTTG GCTAATAAAATAGGTCAAGGTGGTTTTGGGTCAGTCTATTATGCAGAACTGAGGGGAGAGAAAGCCGCAATCAAGAAGAT GGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAACGTCTTGACACGTGTTCACCATCTTAATCTGGTGCGGTTGA TTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGTCAACATCTGCGTGGT TCAGGTAGTAGAGAACCTCTGCCATGGGCTACTCGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCA CGAGCACACAGTGCCTGTATATATTCATCGTGATATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGG TTGCTGATTTTGGTTTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGAACATTTGGA TACATGCCACCGGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGA ACTTATTTCGGCTAAGGAAGCAATTGTCAAGACGAACGATTCTGTTGCCGACTCAAAGGGCCTCGTAGCTTTGTTTGATG GAGTTCTTAGTCAGCCAGATCCTACGGAAGAGCTCTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGAT TCAGTTCGCAAGATGGCACAACTAGCCAAAGCATGTACACAAGACAATCCCCAACTCCGTCCAAGTATGAGATCTATTGT GGTTGCTCTTATGACACTTTCTTCAACTACCGACGATTGGGATGTTGGTTCCTTCTACGAAAATCAAAATCTTGTGAATC TTATGTCCGGAAGATAG |
Microexon DNA seq | TTCAGGAG |
Microexon Amino Acid seq | SSGG |
Microexon-tag DNA Seq | TATGTTCCCGGAAAAGATCAAAATGGTAGCTTTGTGCGTTTGCCGTCTAGTTCAGGAGGTCTTACTGGTAGAGCTATTGCAGGAATAGCTGTCGGAATTGTGGCAGCT |
Microexon-tag Amino Acid seq | YVPGKDQNGSFVRLPSSSGGLTGRAIAGIAVGIVAA |
Transcript ID | KRG89894 |
Gene ID | Gm.32897 |
Gene Name | NA |
Pfam domain motif | SKG6 |
Motif E-value | 0.33 |
Motif start | 218 |
Motif end | 254 |
Protein seq | >KRG89894 MEALRLAYLLLPWWLVFSTAESACKEGCGVALGSYYLWRGSNLTYISSIMASSLLTTPDDIVNYNKDTVPSKDIIIADQR VNVPFPCDCIDGQFLGHTFRYDVQSQDTYETVARSWFANLTDVAWLRRFNTYPPDNIPDTGTLNVTVNCSCGNTDVANYG LFVTYPLRIGDTLGSVAANLSLDSALLQRYNPDVNFNQGTGLVYVPGKDQNGSFVRLPSSSGGLTGRAIAGIAVGIVAAL LLLGVCIYVGYFRKKIQKDEFLPRDSTALFAQDGKDETSRSSANETSGPGGPAIITDITVNKSVEFSYEELATATDNFSL ANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELNVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRG SGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFG YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSVADSKGLVALVDLDFSTQEFLSFSQC* |
CDS seq | >KRG89894 ATGGAAGCCTTGAGGTTGGCGTATCTCCTCCTTCCCTGGTGGTTGGTGTTTTCGACAGCAGAATCGGCGTGCAAGGAGGG CTGTGGAGTGGCACTAGGCTCCTACTACTTATGGCGGGGCTCCAACCTCACCTACATCTCCTCCATCATGGCCTCCAGCC TTCTGACAACTCCGGACGACATAGTCAACTACAACAAGGACACCGTGCCCAGCAAGGACATCATCATCGCCGACCAAAGG GTCAACGTCCCCTTCCCCTGCGACTGCATCGACGGCCAGTTTCTTGGCCACACCTTCCGCTATGACGTTCAGTCACAGGA CACGTACGAGACTGTAGCCAGGAGCTGGTTTGCCAACCTCACCGACGTGGCCTGGCTGAGGAGGTTCAATACCTATCCTC CCGACAACATTCCCGACACGGGAACGCTGAATGTTACGGTTAATTGCTCTTGTGGGAACACTGATGTTGCCAATTATGGC TTGTTCGTTACCTACCCTCTTAGGATTGGGGACACTCTGGGGTCGGTGGCTGCTAATTTGAGCCTTGACTCGGCCTTGCT GCAGAGGTACAATCCCGATGTCAATTTCAACCAGGGGACTGGTCTGGTTTATGTTCCCGGAAAAGATCAAAATGGTAGCT TTGTGCGTTTGCCGTCTAGTTCAGGAGGTCTTACTGGTAGAGCTATTGCAGGAATAGCTGTCGGAATTGTGGCAGCTCTT CTGTTATTGGGAGTTTGTATATATGTTGGATATTTCCGTAAGAAGATACAGAAGGATGAATTTCTTCCACGAGATTCCAC TGCACTCTTTGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTAGTGCAAATGAAACTTCAGGACCTGGTGGACCTGCCA TCATCACAGACATAACAGTGAACAAATCAGTGGAATTTTCATATGAGGAACTGGCAACCGCCACGGATAACTTCAGTTTG GCTAATAAAATAGGTCAAGGTGGTTTTGGGTCAGTCTATTATGCAGAACTGAGGGGAGAGAAAGCCGCAATCAAGAAGAT GGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAACGTCTTGACACGTGTTCACCATCTTAATCTGGTGCGGTTGA TTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGTCAACATCTGCGTGGT TCAGGTAGTAGAGAACCTCTGCCATGGGCTACTCGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCA CGAGCACACAGTGCCTGTATATATTCATCGTGATATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGG TTGCTGATTTTGGTTTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGAACATTTGGA TACATGCCACCGGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGACGTGTATGCTTTTGGAGTTGTTCTTTATGA ACTTATTTCGGCTAAGGAAGCAATTGTCAAGACGAACGATTCTGTTGCCGACTCAAAGGGCCTCGTAGCTTTGGTCGATC TTGATTTCTCTACTCAAGAATTTTTATCATTTAGTCAATGTTAA |