
Microexon ID | Zm_2:216691490-216691497:- |
Species | Zea mays | Coordinates | 2:216691490..216691497 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCTCAAG |
Microexon Amino Acid seq | GAQG |
Microexon-tag DNA Seq | GCATCTCAACGTGATCCCCGATTTCGATCCCGAACGCGTGATGGCGAAGGGGCTCAAGGTAAATCTGAGGTTTCTGCCATTCTTTATAAAGCCGGAGAGTGCATGCAG |
Microexon-tag Amino Acid Seq | ASQRDPRFRSRTRDGEGAQGKSEVSAILYKAGECMQ |
Microexon-tag spanning region | 216690066-216691762 |
Microexon-tag prediction score | 0.9598 |
Overlapped with the annotated transcript (%) | 88.5 |
New Transcript ID | Zm00001d006789_T013x |
Reference Transcript ID | Zm00001d006789_T013 |
Gene ID | Zm00001d006789 |
Gene Name | NA |
Transcript ID | Zm00001d006789_T003 |
Protein ID | Zm00001d006789_P003 |
Gene ID | Zm00001d006789 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm00001d006789_P003 MVTCLSAPRSDPPLLLSPPSFSGFGTTCRGDPFGTELVGSFLYRFAKIQRVEARDDKRPPLVHRMHGSSNFVDHTVLSDS RLEPKHNKDTRDNKADDRDTKADARDVYSDPSIEFQFNKIDSDVKIDNRADGNEIRADRRGHHDYKGDTKFDKDNHPIVA SSLGWKDNKEHRGKRYFEQPSDNADWRFPRPGLQGTDETLKGLTSMEDRNSRDAHDSAFDNKAESKGEDKFRDKDRKKKD EKHRDFGSREGERNDRRTGIQLGGSGVERREMQREERDAEKWDRERKDSLRDKEGNDREKDSAKKDPSMVMEKDNTIVEK LLSDGPVKNAEHENTTTETKVLKDDAWKGHDRDPKDKKREKDLDAGDRHEQRSKYNDKESDDNGTEGDTEKDKDVFGSVQ RRRMVRPRGGGSQASQRDPRFRSRTRDGEGAQASEDNRYCYGNHACISTSNVISIGRAILVLGWLVVLGKLSRKALCRND EQPVAVCTKLFILWLCKFWVLFCYLSLLFISGKSEVSAILYKAGECMQELLKSWKDFEATQEATNVESLQNGPTLEIRIP AEFVTSTNRQVSVHTKQTISVSVPLVISMLHVETEALSATLLYIIIFELPSDLNSLVLMHTGYCSPTSSPPPSAIQELHA TVQVLPPQESYTSTLRNNVRSRAWGAGIGCSFRIERCCIVKARKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAA SNALRQQRFVREVTIQYNLCNEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFNRYELCFSGEKPRGIGSSSNA SDAEPEKHQSSSHHSQNGSVEHELRDVFRWSRCKKAMPESAMRSTGIPLPADQLEVLQDNLEWEDVQWSQTGVWVAGKEY PLARVHFLSGN* |
CDS seq | >Zm00001d006789_T003 ATGGTCACTTGCCTCTCCGCACCCAGATCCGACCCTCCGCTGCTCCTCTCGCCGCCGTCCTTCTCTGGGTTTGGAACGAC GTGCCGTGGAGATCCATTTGGGACTGAATTGGTTGGTTCCTTCCTCTACAGATTTGCCAAAATTCAACGTGTTGAGGCTC GTGATGATAAGAGGCCACCCCTTGTCCATCGGATGCATGGTAGCTCCAACTTTGTTGATCACACCGTCTTGTCTGACAGC AGATTAGAACCAAAGCACAATAAAGATACAAGGGACAATAAGGCGGATGATCGTGACACAAAAGCTGATGCTCGGGATGT CTATAGTGATCCCAGTATTGAGTTTCAGTTTAATAAAATTGACAGTGATGTAAAAATAGACAATAGAGCTGATGGAAATG AAATAAGGGCTGACAGGAGGGGTCACCACGATTACAAAGGTGATACTAAATTTGACAAGGATAATCATCCTATTGTTGCA TCGAGCTTAGGCTGGAAAGACAACAAAGAACATAGGGGCAAAAGGTACTTTGAGCAGCCATCTGATAATGCGGATTGGCG TTTCCCCCGTCCCGGTTTGCAAGGTACTGATGAAACTCTCAAAGGTCTAACTTCCATGGAAGACCGTAATTCAAGAGATG CACATGATTCTGCTTTTGACAACAAAGCTGAATCAAAAGGTGAAGATAAGTTTAGAGACAAGGATAGGAAAAAGAAGGAT GAGAAACATAGAGACTTTGGTTCAAGAGAAGGTGAGAGAAATGATCGTCGGACCGGTATCCAGCTTGGAGGTAGTGGAGT TGAGCGAAGAGAAATGCAAAGGGAAGAGAGGGATGCTGAAAAATGGGACAGGGAAAGAAAAGATTCCTTGAGAGACAAGG AAGGCAATGATAGGGAAAAGGATTCTGCTAAGAAAGATCCATCTATGGTAATGGAAAAGGATAACACAATAGTTGAAAAA CTTTTATCTGATGGACCTGTTAAAAATGCTGAACATGAGAATACAACAACAGAAACTAAGGTGCTTAAGGACGATGCATG GAAAGGTCATGACAGGGATCCTAAAGACAAGAAAAGAGAGAAGGATTTGGATGCAGGAGACAGGCATGAGCAAAGAAGCA AATATAATGACAAGGAATCAGATGATAATGGCACCGAAGGTGATACAGAAAAAGATAAAGATGTTTTTGGAAGTGTTCAA CGCAGGAGGATGGTGCGACCAAGGGGAGGTGGTAGCCAAGCATCTCAACGTGATCCCCGATTTCGATCCCGAACGCGTGA TGGCGAAGGGGCTCAAGCCAGTGAGGATAATAGATACTGTTATGGAAACCATGCATGCATCAGTACTAGTAATGTTATTA GTATTGGGAGGGCTATCCTAGTTTTAGGATGGTTAGTTGTATTAGGAAAGTTATCAAGGAAAGCACTTTGTAGAAACGAT GAGCAACCTGTTGCAGTGTGCACCAAACTGTTTATATTATGGCTCTGTAAGTTTTGGGTTTTGTTTTGTTATCTGAGTCT CCTATTCATTTCAGGTAAATCTGAGGTTTCTGCCATTCTTTATAAAGCCGGAGAGTGCATGCAGGAGCTTCTGAAATCAT GGAAAGATTTTGAAGCAACTCAGGAGGCTACAAATGTTGAAAGTCTACAAAACGGTCCTACTCTTGAAATTCGGATACCT GCCGAATTTGTTACTTCCACTAATCGTCAAGTGAGTGTACATACTAAGCAGACAATCTCAGTTTCAGTTCCTCTGGTTAT CTCCATGCTCCATGTGGAGACTGAAGCTCTGTCAGCAACTCTGTTATATATTATAATTTTTGAGCTTCCTTCAGATTTGA ATTCACTTGTGCTAATGCATACTGGCTATTGCTCGCCTACGTCCTCCCCTCCCCCATCTGCCATCCAAGAGCTTCATGCA ACTGTTCAAGTTCTACCACCACAAGAGAGTTATACTTCAACATTGAGGAACAACGTACGCTCACGTGCTTGGGGTGCTGG GATTGGTTGTAGCTTCCGCATAGAACGCTGCTGCATAGTTAAGGCAAGGAAAGGCGGTGGCACCATTGATCTTGAACCAC GCCTTAGTCACACATCAGCTGTGGAGCCTACACTTGCTCCAGTTGCGGTTGAGCGCACAATGACGACAAGAGCTGCAGCT TCCAATGCATTGCGACAACAAAGATTTGTCCGTGAAGTGACAATACAGTACAACCTCTGCAACGAGCCATGGTTAAAATA TAGTATAAGCATTGTGGCAGACAAGGGATTGAAAAAGTCACTTTATACTTCTGCTAGACTGAAGAAAGGAGAAGTAATAT ATTTGGAGACACATTTTAATAGGTACGAGCTGTGCTTCAGTGGAGAGAAGCCTCGGGGTATTGGATCGAGCTCTAATGCA TCTGATGCAGAACCTGAGAAACACCAGAGCAGTAGTCACCATTCGCAAAACGGCTCTGTGGAGCATGAACTCCGGGATGT GTTCCGATGGTCCCGGTGTAAGAAGGCCATGCCTGAAAGTGCCATGCGCTCCACTGGTATCCCACTACCAGCAGATCAGC TCGAGGTGTTGCAGGATAACCTAGAATGGGAGGACGTGCAGTGGTCGCAGACCGGTGTTTGGGTGGCTGGGAAGGAGTAT CCCCTCGCCCGAGTTCACTTCCTCTCCGGGAACTAG |
Microexon DNA seq | GGCTCAAG |
Microexon Amino Acid seq | GAQG |
Microexon-tag DNA Seq | GCATCTCAACGTGATCCCCGATTTCGATCCCGAACGCGTGATGGCGAAGGGGCTCAAGGTAAATCTGAGGTTTCTGCCATTCTTTATAAAGCCGGAGAGTGCATGCAG |
Microexon-tag Amino Acid seq | ASQRDPRFRSRTRDGEGAQGKSEVSAILYKAGECMQ |
Transcript ID | Zm.12329.3 |
Gene ID | Zm.12329 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Zm.12329.3 MSGPPKRLHEESSHSTPAKRPLDDNSLYSSPSGKAIQSSSSDFHGFFEHDGRFAKIQRVEARDDKRPPLVHRMHGSSNFV DHTVLSDSRLEPKHNKDTRDNKADDRDTKADARDVYSDPSIEFQFNKIDSDVKIDNRADGNEIRADRRGHHDYKGDTKFD KDNHPIVASSLGWKDNKEHRGKRYFEQPSDNADWRFPRPGLQGTDETLKGLTSMEDRNSRDAHDSAFDNKAESKGEDKFR DKDRKKKDEKHRDFGSREGERNDRRTGIQLGGSGVERREMQREERDAEKWDRERKDSLRDKEGNDREKDSAKKDPSMVME KDNTIVEKLLSDGPVKNAEHENTTTETKVLKDDAWKGHDRDPKDKKREKDLDAGDRHEQRSKYNDKESDDNGTEGDTEKD KDVFGSVQRRRMVRPRGGGSQASQRDPRFRSRTRDGEGAQGKSEVSAILYKAGECMQELLKSWKDFEATQEATNVESLQN GPTLEIRIPAEFVTSTNRQVKGAQLWGTDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELHATVQVLPPQESYTSTLRN NVRSRAWGAGIGCSFRIERCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNL CNEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFNRYELCFSGEKPRGIGSSSNASDAEPEKHQSSSHHSQNGS VEHELRDVFRWSRCKKAMPESAMRSTGIPLPADQLEVLQDNLEWEDVQWSQTGVWVAGKEYPLARVHFLSGN* |
CDS seq | >Zm.12329.3 ATGAGTGGTCCTCCAAAGAGGTTGCATGAGGAGAGTAGCCACTCTACACCTGCAAAGCGGCCTTTGGACGACAACAGCTT GTACTCAAGCCCTTCTGGGAAAGCTATTCAGTCAAGCAGCAGTGATTTCCATGGTTTTTTTGAACATGATGGTAGATTTG CCAAAATTCAACGTGTTGAGGCTCGTGATGATAAGAGGCCACCCCTTGTCCATCGGATGCATGGTAGCTCCAACTTTGTT GATCACACCGTCTTGTCTGACAGCAGATTAGAACCAAAGCACAATAAAGATACAAGGGACAATAAGGCGGATGATCGTGA CACAAAAGCTGATGCTCGGGATGTCTATAGTGATCCCAGTATTGAGTTTCAGTTTAATAAAATTGACAGTGATGTAAAAA TAGACAATAGAGCTGATGGAAATGAAATAAGGGCTGACAGGAGGGGTCACCACGATTACAAAGGTGATACTAAATTTGAC AAGGATAATCATCCTATTGTTGCATCGAGCTTAGGCTGGAAAGACAACAAAGAACATAGGGGCAAAAGGTACTTTGAGCA GCCATCTGATAATGCGGATTGGCGTTTCCCCCGTCCCGGTTTGCAAGGTACTGATGAAACTCTCAAAGGTCTAACTTCCA TGGAAGACCGTAATTCAAGAGATGCACATGATTCTGCTTTTGACAACAAAGCTGAATCAAAAGGTGAAGATAAGTTTAGA GACAAGGATAGGAAAAAGAAGGATGAGAAACATAGAGACTTTGGTTCAAGAGAAGGTGAGAGAAATGATCGTCGGACCGG TATCCAGCTTGGAGGTAGTGGAGTTGAGCGAAGAGAAATGCAAAGGGAAGAGAGGGATGCTGAAAAATGGGACAGGGAAA GAAAAGATTCCTTGAGAGACAAGGAAGGCAATGATAGGGAAAAGGATTCTGCTAAGAAAGATCCATCTATGGTAATGGAA AAGGATAACACAATAGTTGAAAAACTTTTATCTGATGGACCTGTTAAAAATGCTGAACATGAGAATACAACAACAGAAAC TAAGGTGCTTAAGGACGATGCATGGAAAGGTCATGACAGGGATCCTAAAGACAAGAAAAGAGAGAAGGATTTGGATGCAG GAGACAGGCATGAGCAAAGAAGCAAATATAATGACAAGGAATCAGATGATAATGGCACCGAAGGTGATACAGAAAAAGAT AAAGATGTTTTTGGAAGTGTTCAACGCAGGAGGATGGTGCGACCAAGGGGAGGTGGTAGCCAAGCATCTCAACGTGATCC CCGATTTCGATCCCGAACGCGTGATGGCGAAGGGGCTCAAGGTAAATCTGAGGTTTCTGCCATTCTTTATAAAGCCGGAG AGTGCATGCAGGAGCTTCTGAAATCATGGAAAGATTTTGAAGCAACTCAGGAGGCTACAAATGTTGAAAGTCTACAAAAC GGTCCTACTCTTGAAATTCGGATACCTGCCGAATTTGTTACTTCCACTAATCGTCAAGTAAAGGGTGCTCAACTTTGGGG AACAGATATATATACAAATGATTCAGATCTTGTGGCTGTGCTAATGCATACTGGCTATTGCTCGCCTACGTCCTCCCCTC CCCCATCTGCCATCCAAGAGCTTCATGCAACTGTTCAAGTTCTACCACCACAAGAGAGTTATACTTCAACATTGAGGAAC AACGTACGCTCACGTGCTTGGGGTGCTGGGATTGGTTGTAGCTTCCGCATAGAACGCTGCTGCATAGTTAAGAAAGGCGG TGGCACCATTGATCTTGAACCACGCCTTAGTCACACATCAGCTGTGGAGCCTACACTTGCTCCAGTTGCGGTTGAGCGCA CAATGACGACAAGAGCTGCAGCTTCCAATGCATTGCGACAACAAAGATTTGTCCGTGAAGTGACAATACAGTACAACCTC TGCAACGAGCCATGGTTAAAATATAGTATAAGCATTGTGGCAGACAAGGGATTGAAAAAGTCACTTTATACTTCTGCTAG ACTGAAGAAAGGAGAAGTAATATATTTGGAGACACATTTTAATAGGTACGAGCTGTGCTTCAGTGGAGAGAAGCCTCGGG GTATTGGATCGAGCTCTAATGCATCTGATGCAGAACCTGAGAAACACCAGAGCAGTAGTCACCATTCGCAAAACGGCTCT GTGGAGCATGAACTCCGGGATGTGTTCCGATGGTCCCGGTGTAAGAAGGCCATGCCTGAAAGTGCCATGCGCTCCACTGG TATCCCACTACCAGCAGATCAGCTCGAGGTGTTGCAGGATAACCTAGAATGGGAGGACGTGCAGTGGTCGCAGACCGGTG TTTGGGTGGCTGGGAAGGAGTATCCCCTCGCCCGAGTTCACTTCCTCTCCGGGAACTAG |