
Microexon ID | Ta_3D:86354335-86354342:+ |
Species | Triticum Aestivum | Coordinates | 3D:86354335..86354342 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTCAAG |
Microexon Amino Acid seq | GSQG |
Microexon-tag DNA Seq | GCATCTCAACGGGAACCTCGATTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGGTATCTGCAATTGTATATAAAGCTGGTGAATGCATGCAA |
Microexon-tag Amino Acid Seq | ASQREPRFRSKMRDGEGSQGKSEVSAIVYKAGECMQ |
Microexon-tag spanning region | 86354058-86354834 |
Microexon-tag prediction score | 0.9795 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G128600.1x |
Reference Transcript ID | TraesCS3D02G128600.1 |
Gene ID | TraesCS3D02G128600 |
Gene Name | NA |
Transcript ID | TraesCS3D02G128600.1 |
Protein ID | |
Gene ID | TraesCS3D02G128600 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >TraesCS3D02G128600.1 MSGAPKRSHEEGSHSTPAKRPLDDSSLYSSPSGKLIQPGGSDFHGPFEHDGRFAKVPRVESRDDKRPPLTHRMPVGSSNF VDHPTSSDSRLESKQNKDARDTKVDDREAKADARDVHSDSRIEFQGNKAETDVKTNNRADDTEIRVDRRAHGDFTGDVVK SDKDSHPTGTSCIAWKDNKDHRGKRCVDQPDDTAGWRFLRPGMQGTDETLKVQTIVEERSSKDAHESTGENKIEPKSEDK FRDKDRRKKDEKYRDFGARDADRNDRRIGIQLAGGSVERREIQRDDRDAEKWDRERKDSQKDKENNDREKDSAKKDSFVA VDKENTILEKTASDGAVKPAEHESTAAEMKTLKDDTWKSHDRDLKDKKREKDVDTGDRHDQRSKYNDKESDDTGPEGDTE KDKDTFGSIQRRRMARPKGGSQASQREPRFRSKMRDGEGSQGKSEVSAIVYKAGECMQELLKSWKEFEATPDARNAENQQ NGPTLEIRIPAEFVTSTNRQVKGAQLWGTDVYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQDSYTSTLR NNVRSRAWGAGIGCSFRIERCCIVKKGGGAIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYN LCNEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFNSSRRYELCFSGEKPRSIGSNSSASDLEPEKHQNNSHHH LQNGDRGAMEHELRDVFRWSRCKKAMPEVAMRSIGIPLPAEQVEVLQDNLEWEDVQWSQTGVWVSGKEYPLARVHFLSAN * |
CDS seq | >TraesCS3D02G128600.1 ATGAGTGGTGCTCCAAAAAGATCGCATGAGGAGGGTAGCCACTCTACACCCGCGAAACGGCCTTTGGACGATAGCAGCTT GTACTCGAGCCCTTCTGGGAAACTCATTCAACCAGGCGGCAGTGATTTCCATGGTCCTTTTGAACATGATGGAAGATTTG CCAAAGTACCACGTGTTGAGTCACGTGATGATAAGAGGCCACCTCTGACACATCGGATGCCTGTTGGCTCTTCCAACTTT GTTGACCACCCAACCTCATCTGACAGCAGATTAGAATCAAAACAAAACAAAGATGCACGGGACACCAAGGTTGACGACCG GGAGGCAAAAGCTGATGCTCGGGATGTCCATAGTGATAGCAGGATTGAATTTCAAGGCAATAAAGCTGAGACTGATGTGA AGACAAACAACAGAGCAGATGACACTGAAATAAGAGTTGACCGGAGGGCGCATGGTGATTTCACAGGTGATGTTGTCAAA TCGGATAAGGATAGCCATCCTACTGGAACTTCATGCATAGCCTGGAAAGATAATAAAGACCATAGAGGTAAAAGATGTGT TGATCAGCCAGATGATACTGCAGGATGGCGTTTTCTTCGTCCTGGTATGCAAGGCACTGATGAAACTCTCAAGGTTCAAA CTATTGTGGAAGAGCGCAGCTCCAAGGATGCACATGAATCTACTGGTGAGAATAAAATAGAACCTAAAAGTGAAGATAAG TTTAGAGACAAGGACAGGAGAAAGAAAGATGAAAAATATAGAGATTTTGGTGCAAGAGACGCTGATAGAAATGATCGCAG AATTGGTATTCAGCTTGCAGGTGGTAGTGTTGAACGAAGAGAAATTCAAAGGGATGATCGGGATGCTGAAAAATGGGACA GGGAAAGAAAAGATTCCCAGAAGGACAAGGAAAACAATGACCGCGAGAAGGATTCTGCCAAGAAGGATTCATTTGTAGCA GTTGACAAGGAGAACACAATACTGGAAAAAACTGCTTCTGATGGAGCTGTTAAACCTGCTGAACATGAGAGTACAGCTGC TGAAATGAAGACACTTAAAGATGACACATGGAAATCTCATGATAGGGATCTTAAGGACAAGAAAAGAGAGAAGGATGTGG ATACAGGAGACAGGCATGACCAAAGGAGTAAATACAATGACAAAGAATCTGATGATACTGGTCCTGAAGGAGATACAGAG AAAGATAAGGATACTTTTGGAAGTATACAGCGCAGGAGGATGGCACGTCCAAAGGGAGGTAGTCAAGCATCTCAACGGGA ACCTCGATTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGGTATCTGCAATTGTATATAAAGCTG GTGAATGCATGCAAGAGCTTCTGAAATCATGGAAAGAGTTTGAAGCTACCCCAGATGCTAGAAATGCTGAGAATCAACAA AATGGTCCTACTCTTGAAATTCGGATACCTGCGGAGTTTGTTACTTCCACGAATCGGCAAGTAAAAGGCGCTCAGCTTTG GGGAACAGATGTTTATACAAATGATTCAGACCTTGTGGCTGTGTTAATGCATACTGGTTACTGCTCCCCTACATCATCAC CTCCACCATCTGCCATCCAAGAACTGCGTGCAACTGTTCGTGTGCTACCACCACAAGACAGCTATACTTCAACACTAAGG AACAATGTCCGTTCGCGTGCTTGGGGCGCTGGTATTGGTTGTAGCTTCCGCATAGAACGCTGCTGCATTGTTAAGAAAGG TGGTGGTGCCATTGATCTTGAGCCTCGCCTTAGCCATACGTCAGCCGTGGAGCCTACACTGGCTCCAGTTGCAGTGGAGC GTACAATGACAACAAGAGCAGCAGCTTCTAATGCATTACGTCAACAAAGATTTGTTCGGGAAGTTACAATCCAGTACAAT CTCTGCAACGAGCCATGGTTAAAGTACAGTATAAGCATTGTGGCGGACAAGGGATTGAAGAAGTCTCTTTATACTTCTGC GAGGCTGAAAAAAGGCGAAGTCATATACTTGGAAACACATTTCAATAGTTCTCGCAGGTATGAGCTGTGCTTTAGTGGGG AAAAGCCTCGCTCCATTGGATCAAATTCCAGTGCATCTGATTTGGAACCGGAAAAACACCAGAACAATAGCCACCACCAT TTGCAAAACGGGGACAGGGGCGCCATGGAACATGAACTCCGGGACGTGTTCCGATGGTCACGGTGTAAGAAGGCCATGCC TGAGGTTGCCATGAGATCTATTGGTATCCCACTGCCAGCTGAACAAGTTGAGGTGCTGCAGGACAATCTGGAGTGGGAGG ACGTGCAGTGGTCGCAGACCGGCGTCTGGGTTTCTGGGAAGGAGTATCCGCTCGCCCGCGTGCATTTCCTCTCGGCGAAC TAG |
Ta_3D:86354335-86354342:+ does not have available information here.