Microexon ID Sb_1:80660754-80660761:-
Species Sorghum   Bicolor
Coordinates 1:80660754..80660761
Microexon Cluster ID MEP19
Size 8
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,8,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCTCAAG
Microexon Amino Acid seq GSQG
Microexon-tag DNA Seq GCATCTCAGCGTGAACCTCGATTTCGATCCAGAATGCATGATGGTGAAGGGTCTCAAGGTAAGTCTGAGGTGTCTGCCATTGTTTACAAAGCTGGGGAGTGCATGCAG
Microexon-tag Amino Acid Seq ASQREPRFRSRMHDGEGSQGKSEVSAIVYKAGECMQ
Microexon-tag spanning region80659370-80661653
Microexon-tag prediction score0.9795
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG40425x
Reference Transcript ID KXG40425
Gene ID SORBI_3001G542700
Gene Name NA
Transcript ID KXG40425
Protein ID
Gene ID SORBI_3001G542700
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >KXG40425
MSGAPKRLHEEGSHTTPAKRPLDDSSLYSSPGKVIQSSGSDFHSSFEHDGRFAKIQRVEPRDDKRPSLTHRMPVSSTNFA
DHPISSDSRLESKQNKDARDTKADDHETKADARDVYSDSRIEIQANKIQGDVKVDKRADQSEIKADRRGHPDYKGDIKFD
KDCHPTVPTNIGWKDNTEHRGKRYFEQPADNVDGHLTLPRPSLQGTDETLKFPISVEERKSKDAHESAGDNKAEPRSEDK
FRDKDRKRKDEKHRDFGAREGDRNDRRTGVQLSGSGVERREMQIRDADKWDRERKDSLRDKEDNDRGKDSARKDSSVVIE
KDNTTLEKASSDGAVKSAEHGNTATESKAPKHDLWNAHDRDPKDKKREKDVEAGDRHEQRRIYNVKESDGNGTEGGMEKD
KEVSGSFQRRRVVRPRGGSQASQREPRFRSRMHDGEGSQGKSEVSAIVYKAGECMQELLKSWTEFSATQDATNAESLQNG
PALEIRIPAEFVTSTNRQVKGAQLWGTDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQESYTSTLRNN
VRSRAWGAGIGCSFQIERCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVVVERTMTTRAAASNALRQQRFVREVTIQYNLC
NEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFDRYELCFSGEKPRIVEAEAEKHQSGSHHSQNGDRREHELRD
VFRWSRCKKAMPESAMRSIGIPLPADQLEVLQDNLEWEDVQWSQTSVWVAGKEHPLARVHFLSEN*
CDS seq >KXG40425
ATGAGTGGTGCTCCAAAGAGGTTGCACGAGGAGGGTAGCCACACCACGCCAGCAAAACGGCCTTTGGATGACAGCAGCTT
GTATTCGAGTCCTGGGAAAGTTATTCAGTCCAGTGGCAGTGATTTCCATAGTTCTTTTGAACATGATGGTAGATTTGCAA
AAATCCAACGTGTGGAGCCTCGTGATGATAAGAGACCATCCCTAACACATCGGATGCCTGTTAGCTCCACCAACTTTGCT
GACCACCCCATCTCGTCTGACAGCAGATTAGAATCAAAGCAAAATAAAGATGCAAGGGACACTAAGGCAGATGATCATGA
GACAAAAGCTGATGCTAGGGATGTCTATAGTGATTCAAGGATTGAAATTCAGGCTAATAAAATTCAGGGTGATGTAAAGG
TAGACAAGAGAGCAGATCAAAGCGAAATAAAGGCTGACAGGAGGGGCCATCCTGATTACAAAGGTGACATCAAATTTGAC
AAGGATTGTCATCCTACTGTTCCAACAAACATAGGCTGGAAGGACAACACAGAACATAGGGGTAAAAGATATTTTGAACA
GCCAGCTGATAATGTGGATGGCCATTTGACTTTGCCCCGTCCTAGTTTACAAGGTACTGATGAAACTCTCAAATTTCCAA
TTTCTGTGGAAGAACGTAAATCCAAGGATGCACATGAATCTGCTGGTGACAACAAAGCTGAACCAAGAAGCGAAGATAAA
TTCAGAGACAAGGACCGGAAAAGGAAGGATGAGAAGCATAGGGACTTTGGTGCAAGAGAAGGTGATAGAAATGATCGTCG
GACCGGTGTACAGCTCAGTGGTAGTGGTGTTGAGCGAAGAGAAATGCAAATTAGAGATGCTGACAAATGGGACAGGGAAA
GAAAAGATTCCCTGAGAGACAAGGAAGACAATGATAGGGGGAAGGATTCTGCTCGGAAAGATTCATCTGTAGTAATTGAG
AAGGATAACACTACACTGGAAAAGGCTTCATCTGATGGAGCTGTTAAGAGTGCTGAGCATGGGAATACAGCAACAGAATC
CAAGGCACCTAAGCATGATTTATGGAATGCTCATGATAGGGATCCTAAGGACAAGAAAAGAGAGAAAGATGTGGAAGCAG
GGGACAGGCATGAACAAAGAAGAATATATAATGTCAAGGAATCAGATGGTAATGGCACCGAAGGAGGTATGGAGAAAGAT
AAAGAAGTTTCTGGAAGTTTCCAACGCAGGAGGGTGGTGCGACCAAGGGGAGGTAGTCAAGCATCTCAGCGTGAACCTCG
ATTTCGATCCAGAATGCATGATGGTGAAGGGTCTCAAGGTAAGTCTGAGGTGTCTGCCATTGTTTACAAAGCTGGGGAGT
GCATGCAGGAGCTGCTGAAATCATGGACAGAGTTCAGTGCAACTCAGGATGCTACAAACGCTGAAAGTCTACAGAATGGT
CCTGCCCTTGAAATTCGAATACCTGCGGAATTTGTTACTTCCACTAATCGTCAAGTAAAGGGTGCTCAGCTTTGGGGAAC
AGATATTTATACAAATGATTCAGATCTTGTGGCTGTGCTAATGCATACTGGTTACTGCTCCCCTACATCCTCCCCTCCCC
CATCTGCCATCCAAGAGCTTCGTGCAACCGTTCGAGTTCTACCACCACAAGAGAGTTATACTTCAACATTGAGGAACAAT
GTGCGTTCACGTGCTTGGGGTGCTGGGATTGGTTGTAGCTTTCAGATAGAACGCTGCTGCATTGTTAAGAAAGGTGGTGG
CACCATTGACCTCGAGCCTCGCCTTAGCCACACATCAGCTGTGGAACCTACTCTTGCTCCAGTTGTGGTTGAGCGTACAA
TGACGACAAGAGCTGCAGCTTCCAATGCTTTGCGTCAACAAAGATTTGTCCGTGAAGTGACTATACAGTATAATCTCTGC
AATGAGCCATGGTTAAAATATAGTATAAGCATTGTGGCAGACAAGGGATTGAAAAAGTCTCTTTATACTTCTGCTAGACT
GAAGAAAGGAGAAGTCATATATTTAGAGACACACTTCGATAGGTACGAGCTGTGCTTCAGTGGAGAGAAGCCTCGTATTG
TTGAAGCAGAAGCGGAGAAACACCAGAGCGGCAGTCACCACTCACAAAATGGTGACAGACGCGAGCATGAATTACGGGAT
GTGTTCCGATGGTCCCGTTGTAAGAAGGCCATGCCTGAGAGTGCCATGCGCTCCATCGGTATCCCGCTACCAGCAGACCA
GCTTGAGGTGTTGCAGGATAACCTAGAATGGGAGGACGTGCAGTGGTCGCAGACCAGCGTCTGGGTGGCTGGGAAGGAGC
ATCCCCTCGCTCGAGTGCACTTCCTCTCGGAGAACTAG
Sb_1:80660754-80660761:- does not have available information here.