
Microexon ID | Sb_1:80660754-80660761:- |
Species | Sorghum Bicolor | Coordinates | 1:80660754..80660761 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTCAAG |
Microexon Amino Acid seq | GSQG |
Microexon-tag DNA Seq | GCATCTCAGCGTGAACCTCGATTTCGATCCAGAATGCATGATGGTGAAGGGTCTCAAGGTAAGTCTGAGGTGTCTGCCATTGTTTACAAAGCTGGGGAGTGCATGCAG |
Microexon-tag Amino Acid Seq | ASQREPRFRSRMHDGEGSQGKSEVSAIVYKAGECMQ |
Microexon-tag spanning region | 80659370-80661653 |
Microexon-tag prediction score | 0.9795 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG40425x |
Reference Transcript ID | KXG40425 |
Gene ID | SORBI_3001G542700 |
Gene Name | NA |
Transcript ID | KXG40425 |
Protein ID | |
Gene ID | SORBI_3001G542700 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >KXG40425 MSGAPKRLHEEGSHTTPAKRPLDDSSLYSSPGKVIQSSGSDFHSSFEHDGRFAKIQRVEPRDDKRPSLTHRMPVSSTNFA DHPISSDSRLESKQNKDARDTKADDHETKADARDVYSDSRIEIQANKIQGDVKVDKRADQSEIKADRRGHPDYKGDIKFD KDCHPTVPTNIGWKDNTEHRGKRYFEQPADNVDGHLTLPRPSLQGTDETLKFPISVEERKSKDAHESAGDNKAEPRSEDK FRDKDRKRKDEKHRDFGAREGDRNDRRTGVQLSGSGVERREMQIRDADKWDRERKDSLRDKEDNDRGKDSARKDSSVVIE KDNTTLEKASSDGAVKSAEHGNTATESKAPKHDLWNAHDRDPKDKKREKDVEAGDRHEQRRIYNVKESDGNGTEGGMEKD KEVSGSFQRRRVVRPRGGSQASQREPRFRSRMHDGEGSQGKSEVSAIVYKAGECMQELLKSWTEFSATQDATNAESLQNG PALEIRIPAEFVTSTNRQVKGAQLWGTDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQESYTSTLRNN VRSRAWGAGIGCSFQIERCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVVVERTMTTRAAASNALRQQRFVREVTIQYNLC NEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFDRYELCFSGEKPRIVEAEAEKHQSGSHHSQNGDRREHELRD VFRWSRCKKAMPESAMRSIGIPLPADQLEVLQDNLEWEDVQWSQTSVWVAGKEHPLARVHFLSEN* |
CDS seq | >KXG40425 ATGAGTGGTGCTCCAAAGAGGTTGCACGAGGAGGGTAGCCACACCACGCCAGCAAAACGGCCTTTGGATGACAGCAGCTT GTATTCGAGTCCTGGGAAAGTTATTCAGTCCAGTGGCAGTGATTTCCATAGTTCTTTTGAACATGATGGTAGATTTGCAA AAATCCAACGTGTGGAGCCTCGTGATGATAAGAGACCATCCCTAACACATCGGATGCCTGTTAGCTCCACCAACTTTGCT GACCACCCCATCTCGTCTGACAGCAGATTAGAATCAAAGCAAAATAAAGATGCAAGGGACACTAAGGCAGATGATCATGA GACAAAAGCTGATGCTAGGGATGTCTATAGTGATTCAAGGATTGAAATTCAGGCTAATAAAATTCAGGGTGATGTAAAGG TAGACAAGAGAGCAGATCAAAGCGAAATAAAGGCTGACAGGAGGGGCCATCCTGATTACAAAGGTGACATCAAATTTGAC AAGGATTGTCATCCTACTGTTCCAACAAACATAGGCTGGAAGGACAACACAGAACATAGGGGTAAAAGATATTTTGAACA GCCAGCTGATAATGTGGATGGCCATTTGACTTTGCCCCGTCCTAGTTTACAAGGTACTGATGAAACTCTCAAATTTCCAA TTTCTGTGGAAGAACGTAAATCCAAGGATGCACATGAATCTGCTGGTGACAACAAAGCTGAACCAAGAAGCGAAGATAAA TTCAGAGACAAGGACCGGAAAAGGAAGGATGAGAAGCATAGGGACTTTGGTGCAAGAGAAGGTGATAGAAATGATCGTCG GACCGGTGTACAGCTCAGTGGTAGTGGTGTTGAGCGAAGAGAAATGCAAATTAGAGATGCTGACAAATGGGACAGGGAAA GAAAAGATTCCCTGAGAGACAAGGAAGACAATGATAGGGGGAAGGATTCTGCTCGGAAAGATTCATCTGTAGTAATTGAG AAGGATAACACTACACTGGAAAAGGCTTCATCTGATGGAGCTGTTAAGAGTGCTGAGCATGGGAATACAGCAACAGAATC CAAGGCACCTAAGCATGATTTATGGAATGCTCATGATAGGGATCCTAAGGACAAGAAAAGAGAGAAAGATGTGGAAGCAG GGGACAGGCATGAACAAAGAAGAATATATAATGTCAAGGAATCAGATGGTAATGGCACCGAAGGAGGTATGGAGAAAGAT AAAGAAGTTTCTGGAAGTTTCCAACGCAGGAGGGTGGTGCGACCAAGGGGAGGTAGTCAAGCATCTCAGCGTGAACCTCG ATTTCGATCCAGAATGCATGATGGTGAAGGGTCTCAAGGTAAGTCTGAGGTGTCTGCCATTGTTTACAAAGCTGGGGAGT GCATGCAGGAGCTGCTGAAATCATGGACAGAGTTCAGTGCAACTCAGGATGCTACAAACGCTGAAAGTCTACAGAATGGT CCTGCCCTTGAAATTCGAATACCTGCGGAATTTGTTACTTCCACTAATCGTCAAGTAAAGGGTGCTCAGCTTTGGGGAAC AGATATTTATACAAATGATTCAGATCTTGTGGCTGTGCTAATGCATACTGGTTACTGCTCCCCTACATCCTCCCCTCCCC CATCTGCCATCCAAGAGCTTCGTGCAACCGTTCGAGTTCTACCACCACAAGAGAGTTATACTTCAACATTGAGGAACAAT GTGCGTTCACGTGCTTGGGGTGCTGGGATTGGTTGTAGCTTTCAGATAGAACGCTGCTGCATTGTTAAGAAAGGTGGTGG CACCATTGACCTCGAGCCTCGCCTTAGCCACACATCAGCTGTGGAACCTACTCTTGCTCCAGTTGTGGTTGAGCGTACAA TGACGACAAGAGCTGCAGCTTCCAATGCTTTGCGTCAACAAAGATTTGTCCGTGAAGTGACTATACAGTATAATCTCTGC AATGAGCCATGGTTAAAATATAGTATAAGCATTGTGGCAGACAAGGGATTGAAAAAGTCTCTTTATACTTCTGCTAGACT GAAGAAAGGAGAAGTCATATATTTAGAGACACACTTCGATAGGTACGAGCTGTGCTTCAGTGGAGAGAAGCCTCGTATTG TTGAAGCAGAAGCGGAGAAACACCAGAGCGGCAGTCACCACTCACAAAATGGTGACAGACGCGAGCATGAATTACGGGAT GTGTTCCGATGGTCCCGTTGTAAGAAGGCCATGCCTGAGAGTGCCATGCGCTCCATCGGTATCCCGCTACCAGCAGACCA GCTTGAGGTGTTGCAGGATAACCTAGAATGGGAGGACGTGCAGTGGTCGCAGACCAGCGTCTGGGTGGCTGGGAAGGAGC ATCCCCTCGCTCGAGTGCACTTCCTCTCGGAGAACTAG |
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