
Microexon ID | Pt_4:15705196-15705203:+ |
Species | Populus Trichocarpa | Coordinates | 4:15705196..15705203 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATGTCAAG |
Microexon Amino Acid seq | GCQG |
Microexon-tag DNA Seq | GTGGCAAGTCGTGAACCCCGTTTTAGGTCCCATACCCAGGACACTGAAGGATGTCAAGGCAAATCTGAGGTATCCTCTGTTGTTTATAAAGTTGGTGAATGCATGCAA |
Microexon-tag Amino Acid Seq | VASREPRFRSHTQDTEGCQGKSEVSSVVYKVGECMQ |
Microexon-tag spanning region | 15704730-15706072 |
Microexon-tag prediction score | 0.9497 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Potri.004G135800.1.v4.1x |
Reference Transcript ID | Potri.004G135800.1.v4.1 |
Gene ID | Potri.004G135800.v4.1 |
Gene Name | NA |
Transcript ID | Potri.004G135800.1.v4.1 |
Protein ID | |
Gene ID | Potri.004G135800.v4.1 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Potri.004G135800.1.v4.1 MSGAPVKRSHEEGVYSSSSKYPPHEDTGSNPKLTSGVSNEYHPPYEMGPDARVAKISRTESRDADRRSPLHSMYRMSPSS NESHMDSHSNVAPESRLESRDSKDSRDHRIENRDPRTDAREVYGEVKRDSQSVKNEKDARFDSRGDDNKEVKHDREAHID LKDGFGAASSQVNWKESKEYHRGKRYLESPGGHVDPWLISRGNSQGPAEIGKESTNIEERDHVEAHEAVGENKLDSKGED RFKDKDRKRKDLKHREWGDKDKERSDRRGNMQVGNSSAEGKESVKEEREAERWERERKDLSKDRERLKEREKDHLKRESG AGAEKESSHNEKESADGTVRISEQENPVLEPKKQKDFDNWKNVDREAKDRKKEREADIEGDRPEKGSRMFGKESDDGFAD GERISEREREVFNYGVQQRRRMLRPRGSSQVASREPRFRSHTQDTEGCQGKSEVSSVVYKVGECMQELIKLWKEYESSQS DKNGESSHKGPTLEIRIPAEHVTATNRQVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPAIQELCATIRVLPPQ DSYTSMLRNNVRSRAWGAGIGCSYRVERCCIVKKGGGTIDLEPCLTHTSAVEPTLAPVVVERTMTTRAAASNALRQQRFV REVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATQALQVHEETEKSHNH HPHSSNGEKTDSDNVLIDIFRWSRCKKPLPQKVMRSVGIPLPLEHVEVLEENLDWEDVQWSQTGVWIAGKEYALARVHFL SPS* |
CDS seq | >Potri.004G135800.1.v4.1 ATGAGTGGTGCTCCTGTTAAAAGATCGCATGAAGAGGGTGTTTATTCTTCTTCTTCAAAATACCCTCCACATGAGGACAC AGGTTCAAACCCTAAGCTGACATCTGGGGTTTCAAATGAGTACCATCCACCATATGAGATGGGTCCGGATGCTCGGGTGG CAAAGATTTCCAGAACTGAGTCTCGAGATGCAGATAGAAGATCACCTTTGCATTCAATGTATCGAATGTCGCCATCTTCA AATGAATCACACATGGATTCTCATTCTAATGTTGCTCCTGAAAGCAGGCTTGAATCAAGGGATTCCAAGGACAGCAGAGA TCACAGGATTGAAAACCGTGACCCAAGGACTGATGCAAGAGAGGTGTATGGTGAGGTAAAGAGGGATTCACAAAGTGTTA AAAATGAAAAGGATGCGAGGTTTGATAGTAGAGGGGATGACAATAAGGAAGTAAAGCATGACAGGGAGGCTCATATTGAT CTGAAGGATGGTTTTGGTGCAGCAAGTAGTCAAGTGAATTGGAAGGAATCCAAAGAATACCATAGAGGAAAGAGATATTT GGAATCCCCAGGTGGACATGTGGATCCTTGGCTTATATCACGTGGTAATTCTCAAGGTCCTGCTGAGATAGGAAAGGAAA GCACTAACATTGAGGAGAGAGATCATGTGGAAGCTCATGAGGCAGTTGGTGAAAATAAACTTGATTCAAAAGGTGAGGAT AGATTTAAAGACAAGGATAGGAAGCGGAAAGATTTAAAGCACCGGGAATGGGGAGACAAAGATAAGGAAAGAAGCGACCG AAGAGGAAACATGCAAGTAGGCAACAGTAGTGCTGAGGGCAAGGAGTCAGTGAAGGAAGAGAGAGAAGCAGAGAGGTGGG AGCGGGAGAGGAAGGACCTGTCAAAAGACAGGGAAAGGTTAAAAGAGAGGGAGAAGGACCACTTAAAGAGAGAATCAGGA GCTGGAGCTGAAAAAGAGAGTTCGCACAATGAAAAGGAATCTGCAGATGGAACTGTCAGAATCTCAGAACAGGAAAATCC AGTTTTAGAGCCAAAAAAACAGAAAGATTTTGATAACTGGAAAAATGTTGATAGAGAAGCTAAAGATAGAAAGAAAGAAA GAGAAGCTGACATAGAAGGAGATAGACCTGAGAAGGGAAGCAGGATGTTTGGCAAAGAATCCGATGATGGATTTGCGGAT GGGGAAAGGATTAGTGAAAGAGAAAGAGAAGTTTTTAACTATGGAGTCCAACAGCGCAGGAGGATGCTTCGGCCTAGGGG TAGCTCACAAGTGGCAAGTCGTGAACCCCGTTTTAGGTCCCATACCCAGGACACTGAAGGATGTCAAGGCAAATCTGAGG TATCCTCTGTTGTTTATAAAGTTGGTGAATGCATGCAAGAGCTGATAAAGTTATGGAAGGAGTATGAATCATCTCAATCT GATAAAAATGGTGAAAGTAGTCATAAGGGCCCCACTCTTGAAATTCGAATACCAGCAGAACATGTTACTGCTACAAATCG CCAAGTAAGAGGTGGACAATTATGGGGGACGGATATATACACAGATGATTCTGATCTTGTTGCTGTTCTCATGCATACAG GCTACTGCCGTCCCACTGCTTCTCCTCCTCCACCTGCCATCCAAGAGTTATGTGCTACTATAAGAGTGTTGCCTCCACAA GATAGCTACACCTCTATGCTGAGAAATAATGTTCGCTCACGTGCCTGGGGAGCTGGAATCGGTTGTAGTTACCGTGTTGA GCGTTGCTGCATCGTGAAGAAAGGAGGTGGAACCATTGATCTTGAGCCCTGTCTTACACACACATCAGCAGTTGAACCCA CCCTTGCACCTGTGGTTGTTGAACGTACAATGACCACCCGCGCAGCAGCTTCGAATGCATTGCGGCAACAGAGATTTGTG CGTGAAGTTACAATACAGTACAACCTATGCAATGAGCCATGGATAAAATACAGCATTAGTATCGTTGCTGACAAGGGTCT GAAAAAGCCTCTCTATACTTCTGCACGTTTGAAGAAGGGAGAGGTTCTATATTTAGAAACACATTCATGCAGGTATGAGC TCTGTTTTACTGGAGAGAAAATGGTCAAAGCAACACAGGCTTTGCAGGTGCATGAAGAGACAGAGAAATCCCATAATCAC CACCCTCATTCCTCAAATGGAGAGAAGACTGACTCTGATAATGTTCTTATTGACATTTTCCGGTGGTCTAGATGTAAGAA ACCACTACCACAGAAGGTCATGCGGTCAGTTGGGATCCCATTGCCCCTTGAACATGTTGAGGTATTGGAGGAGAATCTAG ACTGGGAGGATGTGCAATGGTCACAAACTGGTGTTTGGATAGCTGGAAAAGAATACGCACTTGCCAGGGTGCATTTTCTA TCTCCAAGTTAG |
Pt_4:15705196-15705203:+ does not have available information here.