Microexon ID Pt_4:15705196-15705203:+
Species Populus   Trichocarpa
Coordinates 4:15705196..15705203
Microexon Cluster ID MEP19
Size 8
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,8,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATGTCAAG
Microexon Amino Acid seq GCQG
Microexon-tag DNA Seq GTGGCAAGTCGTGAACCCCGTTTTAGGTCCCATACCCAGGACACTGAAGGATGTCAAGGCAAATCTGAGGTATCCTCTGTTGTTTATAAAGTTGGTGAATGCATGCAA
Microexon-tag Amino Acid Seq VASREPRFRSHTQDTEGCQGKSEVSSVVYKVGECMQ
Microexon-tag spanning region15704730-15706072
Microexon-tag prediction score0.9497
Overlapped with the annotated transcript (%) 100
New Transcript ID Potri.004G135800.1.v4.1x
Reference Transcript ID Potri.004G135800.1.v4.1
Gene ID Potri.004G135800.v4.1
Gene Name NA
Transcript ID Potri.004G135800.1.v4.1
Protein ID
Gene ID Potri.004G135800.v4.1
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >Potri.004G135800.1.v4.1
MSGAPVKRSHEEGVYSSSSKYPPHEDTGSNPKLTSGVSNEYHPPYEMGPDARVAKISRTESRDADRRSPLHSMYRMSPSS
NESHMDSHSNVAPESRLESRDSKDSRDHRIENRDPRTDAREVYGEVKRDSQSVKNEKDARFDSRGDDNKEVKHDREAHID
LKDGFGAASSQVNWKESKEYHRGKRYLESPGGHVDPWLISRGNSQGPAEIGKESTNIEERDHVEAHEAVGENKLDSKGED
RFKDKDRKRKDLKHREWGDKDKERSDRRGNMQVGNSSAEGKESVKEEREAERWERERKDLSKDRERLKEREKDHLKRESG
AGAEKESSHNEKESADGTVRISEQENPVLEPKKQKDFDNWKNVDREAKDRKKEREADIEGDRPEKGSRMFGKESDDGFAD
GERISEREREVFNYGVQQRRRMLRPRGSSQVASREPRFRSHTQDTEGCQGKSEVSSVVYKVGECMQELIKLWKEYESSQS
DKNGESSHKGPTLEIRIPAEHVTATNRQVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPAIQELCATIRVLPPQ
DSYTSMLRNNVRSRAWGAGIGCSYRVERCCIVKKGGGTIDLEPCLTHTSAVEPTLAPVVVERTMTTRAAASNALRQQRFV
REVTIQYNLCNEPWIKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATQALQVHEETEKSHNH
HPHSSNGEKTDSDNVLIDIFRWSRCKKPLPQKVMRSVGIPLPLEHVEVLEENLDWEDVQWSQTGVWIAGKEYALARVHFL
SPS*
CDS seq >Potri.004G135800.1.v4.1
ATGAGTGGTGCTCCTGTTAAAAGATCGCATGAAGAGGGTGTTTATTCTTCTTCTTCAAAATACCCTCCACATGAGGACAC
AGGTTCAAACCCTAAGCTGACATCTGGGGTTTCAAATGAGTACCATCCACCATATGAGATGGGTCCGGATGCTCGGGTGG
CAAAGATTTCCAGAACTGAGTCTCGAGATGCAGATAGAAGATCACCTTTGCATTCAATGTATCGAATGTCGCCATCTTCA
AATGAATCACACATGGATTCTCATTCTAATGTTGCTCCTGAAAGCAGGCTTGAATCAAGGGATTCCAAGGACAGCAGAGA
TCACAGGATTGAAAACCGTGACCCAAGGACTGATGCAAGAGAGGTGTATGGTGAGGTAAAGAGGGATTCACAAAGTGTTA
AAAATGAAAAGGATGCGAGGTTTGATAGTAGAGGGGATGACAATAAGGAAGTAAAGCATGACAGGGAGGCTCATATTGAT
CTGAAGGATGGTTTTGGTGCAGCAAGTAGTCAAGTGAATTGGAAGGAATCCAAAGAATACCATAGAGGAAAGAGATATTT
GGAATCCCCAGGTGGACATGTGGATCCTTGGCTTATATCACGTGGTAATTCTCAAGGTCCTGCTGAGATAGGAAAGGAAA
GCACTAACATTGAGGAGAGAGATCATGTGGAAGCTCATGAGGCAGTTGGTGAAAATAAACTTGATTCAAAAGGTGAGGAT
AGATTTAAAGACAAGGATAGGAAGCGGAAAGATTTAAAGCACCGGGAATGGGGAGACAAAGATAAGGAAAGAAGCGACCG
AAGAGGAAACATGCAAGTAGGCAACAGTAGTGCTGAGGGCAAGGAGTCAGTGAAGGAAGAGAGAGAAGCAGAGAGGTGGG
AGCGGGAGAGGAAGGACCTGTCAAAAGACAGGGAAAGGTTAAAAGAGAGGGAGAAGGACCACTTAAAGAGAGAATCAGGA
GCTGGAGCTGAAAAAGAGAGTTCGCACAATGAAAAGGAATCTGCAGATGGAACTGTCAGAATCTCAGAACAGGAAAATCC
AGTTTTAGAGCCAAAAAAACAGAAAGATTTTGATAACTGGAAAAATGTTGATAGAGAAGCTAAAGATAGAAAGAAAGAAA
GAGAAGCTGACATAGAAGGAGATAGACCTGAGAAGGGAAGCAGGATGTTTGGCAAAGAATCCGATGATGGATTTGCGGAT
GGGGAAAGGATTAGTGAAAGAGAAAGAGAAGTTTTTAACTATGGAGTCCAACAGCGCAGGAGGATGCTTCGGCCTAGGGG
TAGCTCACAAGTGGCAAGTCGTGAACCCCGTTTTAGGTCCCATACCCAGGACACTGAAGGATGTCAAGGCAAATCTGAGG
TATCCTCTGTTGTTTATAAAGTTGGTGAATGCATGCAAGAGCTGATAAAGTTATGGAAGGAGTATGAATCATCTCAATCT
GATAAAAATGGTGAAAGTAGTCATAAGGGCCCCACTCTTGAAATTCGAATACCAGCAGAACATGTTACTGCTACAAATCG
CCAAGTAAGAGGTGGACAATTATGGGGGACGGATATATACACAGATGATTCTGATCTTGTTGCTGTTCTCATGCATACAG
GCTACTGCCGTCCCACTGCTTCTCCTCCTCCACCTGCCATCCAAGAGTTATGTGCTACTATAAGAGTGTTGCCTCCACAA
GATAGCTACACCTCTATGCTGAGAAATAATGTTCGCTCACGTGCCTGGGGAGCTGGAATCGGTTGTAGTTACCGTGTTGA
GCGTTGCTGCATCGTGAAGAAAGGAGGTGGAACCATTGATCTTGAGCCCTGTCTTACACACACATCAGCAGTTGAACCCA
CCCTTGCACCTGTGGTTGTTGAACGTACAATGACCACCCGCGCAGCAGCTTCGAATGCATTGCGGCAACAGAGATTTGTG
CGTGAAGTTACAATACAGTACAACCTATGCAATGAGCCATGGATAAAATACAGCATTAGTATCGTTGCTGACAAGGGTCT
GAAAAAGCCTCTCTATACTTCTGCACGTTTGAAGAAGGGAGAGGTTCTATATTTAGAAACACATTCATGCAGGTATGAGC
TCTGTTTTACTGGAGAGAAAATGGTCAAAGCAACACAGGCTTTGCAGGTGCATGAAGAGACAGAGAAATCCCATAATCAC
CACCCTCATTCCTCAAATGGAGAGAAGACTGACTCTGATAATGTTCTTATTGACATTTTCCGGTGGTCTAGATGTAAGAA
ACCACTACCACAGAAGGTCATGCGGTCAGTTGGGATCCCATTGCCCCTTGAACATGTTGAGGTATTGGAGGAGAATCTAG
ACTGGGAGGATGTGCAATGGTCACAAACTGGTGTTTGGATAGCTGGAAAAGAATACGCACTTGCCAGGGTGCATTTTCTA
TCTCCAAGTTAG
Pt_4:15705196-15705203:+ does not have available information here.