
Microexon ID | Pp_8:2974751-2974758:+ |
Species | Physcomitrium patens | Coordinates | 8:2974751..2974758 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGCTCAAG |
Microexon Amino Acid seq | GAQG |
Microexon-tag DNA Seq | CCAGCAAACCGAGACCCTCGGTCTCGGTTTCGGCCCAAAGATATTGAAGGGGCTCAAGGCAGGGCAGAAAGTTCATTCATTAATTACAGAGTTGGGGAAGGAATGCCG |
Microexon-tag Amino Acid Seq | PANRDPRSRFRPKDIEGAQGRAESSFINYRVGEGMP |
Microexon-tag spanning region | 2974197-2974976 |
Microexon-tag prediction score | 0.8699 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c8_5360V3.1x |
Reference Transcript ID | Pp3c8_5360V3.1 |
Gene ID | Pp3c8_5360 |
Gene Name | NA |
Transcript ID | Pp3c8_5360V3.1 |
Protein ID | Pp3c8_5360V3.1 |
Gene ID | Pp3c8_5360 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c8_5360V3.1 MSLPVKRQHEETASVVGKALEGSGTGTGKQNYAGVGSGMVMEPASAFGGELRPAKVARHGDRGVDPAEKVEFFNSSHANF KPGRDGGGSGSIEGTVVEGNSIKEGQVQTLRIKFSGGSAEGKSDREGRDPGRLDLERKTSGGKDYGDVLKESSGNKELLG RVNVKSEEQLLQSGGSGREVGQELVDNARGEGNSEGLRKKSPREGEGKVAVKDVPTDVKREEPHEKEKEKKDEKRSEREE DALPSLQQQQQQQLLPQSHLDVTNEKDNERDEKERDKGDKEKERMWEREGSRDKEREDARSEKREKREKERDRDFHRRER EERDDNLVNKGEKDDGKPVKVEDIDTDRKLTREVDERKLVEKEARERVRERDRDKERDEDGEKEKRKKRSREQEKNRDSL GTMDTEVAGGEKEKDAAHGHGVQQRKRMLRPRGQSNPANRDPRSRFRPKDIEGAQGRAESSFINYRVGEGMPELAKLRKE YDSGERNSSDNGWGPAVEIRIPAEHATTNNRQVRGSQLWGTDIYTDDSDIVAVLLHTGYYSPSPTPPPDSISELRATIRI LESQNMYTSTLRNSIRSRAWGGGSGCSYNVERCRIVKQGGGTVELEPSLTRTPPFVPTLAPAASERTVTTRAASSSPYRQ QRFMQEVTIQYNLCNEPWAKYSMSIVADRGLKKSQYTSARLKKGEVLYVETQVHRYELAYDGERTTCNGATTATSSFPPG TSGMEKGKEKWGSTDRTLAVGDKEPILQTHNGEKSHGNHPSNGLTGGHHGHSSSEPHEYYRWSKCKRPLSLSSMKKKGVP LSEEFIEVLEEGLAWEEIQWSPTGVWVRGTVYILSRAQFFSSDKDDMEE* |
CDS seq | >Pp3c8_5360V3.1 ATGAGTCTTCCGGTGAAGCGGCAGCATGAGGAGACGGCGTCGGTAGTCGGGAAGGCGCTGGAGGGCAGTGGCACTGGAAC TGGCAAGCAAAATTATGCGGGAGTGGGGAGCGGAATGGTGATGGAGCCTGCGTCTGCATTTGGAGGAGAGTTGCGTCCCG CTAAAGTGGCGCGCCATGGTGATCGGGGAGTGGACCCGGCAGAGAAGGTTGAGTTTTTCAACAGTTCACATGCGAATTTC AAACCTGGAAGAGATGGAGGTGGCTCTGGGTCGATTGAGGGAACTGTCGTAGAGGGGAACAGTATCAAGGAAGGGCAAGT CCAGACACTGAGGATTAAGTTCTCGGGTGGGAGTGCTGAGGGAAAGAGTGATCGGGAGGGTCGGGATCCAGGGCGGCTGG ATTTAGAGAGGAAGACGAGTGGTGGGAAGGATTACGGAGATGTGCTGAAGGAGAGCAGCGGCAACAAGGAGCTTCTTGGT AGGGTTAACGTAAAGAGCGAGGAGCAGCTGCTGCAATCGGGAGGGAGTGGTCGGGAAGTAGGGCAAGAATTAGTTGATAA CGCCCGCGGGGAAGGAAATTCTGAGGGCTTGAGAAAGAAGAGCCCTCGCGAGGGTGAGGGTAAAGTAGCCGTGAAGGATG TGCCAACTGATGTGAAGAGGGAGGAGCCGCATGAGAAGGAGAAGGAGAAGAAGGATGAGAAGCGTAGTGAGCGTGAAGAA GATGCGCTGCCGTCACTGCAGCAACAACAGCAGCAGCAGCTGCTGCCCCAATCGCATCTGGATGTTACTAATGAGAAAGA CAATGAGAGGGATGAGAAAGAGAGGGACAAGGGAGATAAGGAGAAAGAGAGGATGTGGGAACGGGAGGGGTCACGCGATA AGGAAAGAGAGGATGCACGTTCGGAGAAACGAGAGAAGAGGGAGAAAGAGCGTGATCGGGATTTTCATCGGCGAGAGCGT GAAGAGCGAGATGATAATCTTGTGAACAAAGGAGAGAAAGATGATGGGAAACCTGTTAAGGTTGAAGACATAGATACAGA TAGGAAGCTTACGCGTGAGGTTGACGAACGAAAATTGGTCGAGAAGGAAGCTCGCGAGCGTGTTAGGGAAAGAGACAGAG ACAAGGAGAGAGATGAGGATGGGGAAAAAGAGAAGCGCAAGAAACGGAGTCGCGAGCAAGAGAAAAATCGTGATTCCTTG GGTACAATGGACACTGAAGTCGCAGGGGGGGAGAAGGAAAAGGATGCCGCTCATGGTCATGGAGTGCAGCAGCGCAAGAG GATGTTGCGTCCTAGAGGCCAGTCAAACCCAGCAAACCGAGACCCTCGGTCTCGGTTTCGGCCCAAAGATATTGAAGGGG CTCAAGGCAGGGCAGAAAGTTCATTCATTAATTACAGAGTTGGGGAAGGAATGCCGGAACTTGCAAAACTTCGGAAGGAG TACGATTCTGGGGAACGAAATAGCTCAGATAATGGGTGGGGCCCTGCCGTTGAAATTCGTATCCCTGCTGAGCACGCTAC TACGAATAACCGTCAGGTCAGAGGGAGCCAGTTATGGGGAACAGACATATATACAGACGACTCTGACATAGTTGCAGTCT TGCTACATACAGGATACTACTCACCTTCACCCACTCCGCCACCAGATTCAATATCAGAGCTGCGGGCCACCATTCGGATT CTTGAATCCCAAAATATGTACACTTCTACATTACGAAATAGTATTCGATCACGTGCGTGGGGAGGCGGAAGTGGATGCAG CTACAACGTTGAAAGGTGCCGCATAGTGAAGCAAGGAGGGGGTACTGTAGAGCTGGAGCCATCTTTGACTCGCACTCCCC CATTTGTTCCGACACTGGCTCCTGCAGCATCAGAGCGAACCGTTACTACGAGAGCTGCCTCTTCTAGTCCATATCGGCAA CAAAGATTTATGCAAGAAGTGACTATACAATACAACTTATGCAATGAACCCTGGGCTAAATACAGCATGAGCATTGTGGC CGACCGTGGACTAAAGAAATCTCAATACACTTCTGCTCGACTCAAAAAAGGGGAAGTGCTCTATGTAGAGACCCAGGTTC ATCGGTATGAACTGGCATATGATGGAGAGCGTACAACGTGCAATGGCGCAACCACTGCCACCTCTTCTTTCCCTCCAGGG ACTTCTGGAATGGAAAAGGGCAAAGAGAAATGGGGTTCGACAGATAGAACTTTGGCAGTTGGCGACAAAGAACCAATTTT GCAAACCCACAATGGAGAAAAATCACATGGAAATCATCCAAGCAATGGGTTAACAGGTGGCCATCATGGTCACTCTAGTA GTGAGCCACATGAATACTACAGATGGTCCAAGTGTAAACGGCCTCTGTCGCTATCGTCTATGAAAAAGAAAGGTGTACCC TTGTCAGAAGAATTTATTGAGGTTTTGGAAGAAGGTTTGGCTTGGGAGGAGATTCAGTGGTCCCCAACGGGTGTGTGGGT TCGGGGAACAGTGTACATCCTTAGTAGAGCCCAATTTTTTTCTTCCGATAAGGATGATATGGAAGAATAG |
Microexon DNA seq | GGCTCAAG |
Microexon Amino Acid seq | GAQG |
Microexon-tag DNA Seq | CCAGCAAACCGAGACCCTCGGTCTCGGTTTCGGCCCAAAGATATTGAAGGGGCTCAAGGCAGGGCAGAAAGTTCATTCATTAATTACAGAGTTGGGGAAGGAATGCCG |
Microexon-tag Amino Acid seq | PANRDPRSRFRPKDIEGAQGRAESSFINYRVGEGMP |
Transcript ID | Pp3c8_5360V3.3 |
Gene ID | Pp.23676 |
Gene Name | NA |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >Pp3c8_5360V3.3 MSLPVKRQHEETASVVGKALEGSGTGTGKQNYAGVGSGMVMEPASAFGGELRPAKVARHGDRGVDPAEKVEFFNSSHANF KPGRDGGGSGSIEGTVVEGNSIKEGQVQTLRIKFSGGSAEGKSDREGRDPGRLDLERKTSGGKDYGDVLKESSGNKELLG RVNVKSEEQLLQSGGSGREVGQELVDNARGEGNSEGLRKKSPREGEGKVAVKDVPTDVKREEPHEKEKEKKDEKRSEREE DALPSLQQQQQQQLLPQSHLDVTNEKDNERDEKERDKGDKEKERMWEREGSRDKEREDARSEKREKREKERDRDFHRRER EERDDNLVNKGEKDDGKPVKVEDIDTDRKLTREVDERKLVEKEARERVRERDRDKERDEDGEKEKRKKRSREQEKNRDSL GTMDTEVAGGEKEKDAAHGHGVQQRKRMLRPRGQSNPANRDPRSRFRPKDIEGAQGRAESSFINYRVGEGMPELAKLRKE YDSGERNSSDNGWGPAVEIRIPAEHATTNNRQVRGSQLWGTDIYTDDSDIVAVLLHTGYYSPSPTPPPDSISELRATIRI LESQNMYTSTLRNSIRSRAWGGGSGCSYNVERCRIVKQGGGTVELEPSLTRTPPFVPTLAPAASERTVTTRAASSSPYRQ QRFMQEVTIQYNLCNEPWAKYSMSIVADRGLKKSQYTSARLKKGEVLYVETQVHRYELAYDGERTTCNGATTATSSFPPG TSGMEKGKEKWGSTDRTLAVGDKEPILQTHNGEKSHGNHPSNGLTGGHHGHSSSEPHEYYRWSKCKRPLSLSSMKKKGVP LSEEFIEVLEEGLAWEEIQWSPTGVWVRGTVYILSRAQFFSSDKDDMEE* |
CDS seq | >Pp3c8_5360V3.3 ATGAGTCTTCCGGTGAAGCGGCAGCATGAGGAGACGGCGTCGGTAGTCGGGAAGGCGCTGGAGGGCAGTGGCACTGGAAC TGGCAAGCAAAATTATGCGGGAGTGGGGAGCGGAATGGTGATGGAGCCTGCGTCTGCATTTGGAGGAGAGTTGCGTCCCG CTAAAGTGGCGCGCCATGGTGATCGGGGAGTGGACCCGGCAGAGAAGGTTGAGTTTTTCAACAGTTCACATGCGAATTTC AAACCTGGAAGAGATGGAGGTGGCTCTGGGTCGATTGAGGGAACTGTCGTAGAGGGGAACAGTATCAAGGAAGGGCAAGT CCAGACACTGAGGATTAAGTTCTCGGGTGGGAGTGCTGAGGGAAAGAGTGATCGGGAGGGTCGGGATCCAGGGCGGCTGG ATTTAGAGAGGAAGACGAGTGGTGGGAAGGATTACGGAGATGTGCTGAAGGAGAGCAGCGGCAACAAGGAGCTTCTTGGT AGGGTTAACGTAAAGAGCGAGGAGCAGCTGCTGCAATCGGGAGGGAGTGGTCGGGAAGTAGGGCAAGAATTAGTTGATAA CGCCCGCGGGGAAGGAAATTCTGAGGGCTTGAGAAAGAAGAGCCCTCGCGAGGGTGAGGGTAAAGTAGCCGTGAAGGATG TGCCAACTGATGTGAAGAGGGAGGAGCCGCATGAGAAGGAGAAGGAGAAGAAGGATGAGAAGCGTAGTGAGCGTGAAGAA GATGCGCTGCCGTCACTGCAGCAACAACAGCAGCAGCAGCTGCTGCCCCAATCGCATCTGGATGTTACTAATGAGAAAGA CAATGAGAGGGATGAGAAAGAGAGGGACAAGGGAGATAAGGAGAAAGAGAGGATGTGGGAACGGGAGGGGTCACGCGATA AGGAAAGAGAGGATGCACGTTCGGAGAAACGAGAGAAGAGGGAGAAAGAGCGTGATCGGGATTTTCATCGGCGAGAGCGT GAAGAGCGAGATGATAATCTTGTGAACAAAGGAGAGAAAGATGATGGGAAACCTGTTAAGGTTGAAGACATAGATACAGA TAGGAAGCTTACGCGTGAGGTTGACGAACGAAAATTGGTCGAGAAGGAAGCTCGCGAGCGTGTTAGGGAAAGAGACAGAG ACAAGGAGAGAGATGAGGATGGGGAAAAAGAGAAGCGCAAGAAACGGAGTCGCGAGCAAGAGAAAAATCGTGATTCCTTG GGTACAATGGACACTGAAGTCGCAGGGGGGGAGAAGGAAAAGGATGCCGCTCATGGTCATGGAGTGCAGCAGCGCAAGAG GATGTTGCGTCCTAGAGGCCAGTCAAACCCAGCAAACCGAGACCCTCGGTCTCGGTTTCGGCCCAAAGATATTGAAGGGG CTCAAGGCAGGGCAGAAAGTTCATTCATTAATTACAGAGTTGGGGAAGGAATGCCGGAACTTGCAAAACTTCGGAAGGAG TACGATTCTGGGGAACGAAATAGCTCAGATAATGGGTGGGGCCCTGCCGTTGAAATTCGTATCCCTGCTGAGCACGCTAC TACGAATAACCGTCAGGTCAGAGGGAGCCAGTTATGGGGAACAGACATATATACAGACGACTCTGACATAGTTGCAGTCT TGCTACATACAGGATACTACTCACCTTCACCCACTCCGCCACCAGATTCAATATCAGAGCTGCGGGCCACCATTCGGATT CTTGAATCCCAAAATATGTACACTTCTACATTACGAAATAGTATTCGATCACGTGCGTGGGGAGGCGGAAGTGGATGCAG CTACAACGTTGAAAGGTGCCGCATAGTGAAGCAAGGAGGGGGTACTGTAGAGCTGGAGCCATCTTTGACTCGCACTCCCC CATTTGTTCCGACACTGGCTCCTGCAGCATCAGAGCGAACCGTTACTACGAGAGCTGCCTCTTCTAGTCCATATCGGCAA CAAAGATTTATGCAAGAAGTGACTATACAATACAACTTATGCAATGAACCCTGGGCTAAATACAGCATGAGCATTGTGGC CGACCGTGGACTAAAGAAATCTCAATACACTTCTGCTCGACTCAAAAAAGGGGAAGTGCTCTATGTAGAGACCCAGGTTC ATCGGTATGAACTGGCATATGATGGAGAGCGTACAACGTGCAATGGCGCAACCACTGCCACCTCTTCTTTCCCTCCAGGG ACTTCTGGAATGGAAAAGGGCAAAGAGAAATGGGGTTCGACAGATAGAACTTTGGCAGTTGGCGACAAAGAACCAATTTT GCAAACCCACAATGGAGAAAAATCACATGGAAATCATCCAAGCAATGGGTTAACAGGTGGCCATCATGGTCACTCTAGTA GTGAGCCACATGAATACTACAGATGGTCCAAGTGTAAACGGCCTCTGTCGCTATCGTCTATGAAAAAGAAAGGTGTACCC TTGTCAGAAGAATTTATTGAGGTTTTGGAAGAAGGTTTGGCTTGGGAGGAGATTCAGTGGTCCCCAACGGGTGTGTGGGT TCGGGGAACAGTGTACATCCTTAGTAGAGCCCAATTTTTTTCTTCCGATAAGGATGATATGGAAGAATAG |