Microexon ID Hv_3H:75163835-75163842:+
Species Hordeum   Vulgare
Coordinates 3H:75163835..75163842
Microexon Cluster ID MEP19
Size 8
Phase 2
Pfam Domain Motif Unknown
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,8,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GTCTCAAG
Microexon Amino Acid seq GSQG
Microexon-tag DNA Seq GCATCTCAACGAGAACCTCGGTTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGATATCTGCAATTGTATATAAAGCTGGTGAATGCATGCAA
Microexon-tag Amino Acid Seq ASQREPRFRSKMRDGEGSQGKSEISAIVYKAGECMQ
Microexon-tag spanning region75163594-75164333
Microexon-tag prediction score0.9718
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.3HG0241050.1x
Reference Transcript ID HORVU.MOREX.r3.3HG0241050.1
Gene ID HORVU.MOREX.r3.3HG0241050
Gene Name NA
Transcript ID HORVU.MOREX.r3.3HG0241050.1
Protein ID
Gene ID HORVU.MOREX.r3.3HG0241050
Gene Name
Pfam domain motif Unknown
Motif E-value NA
Motif start NA
Motif end NA
Protein seq >HORVU.MOREX.r3.3HG0241050.1
MSGAPKRLHEEGSHSTPAKRPLDESSVYPSPSGKLIQPGSSDFHGSFEHDVRFAKIPRVESRDDKRPSLTHRMPVASSNF
VDHTIPSDSRLESKQNKDARDTKVDDREAKSDARDVHGDSRIEFQGNKVETDVKTNNRADDNEIRAERRVHGDFTGDVVK
SDKDSHPTGTSNLAWKDNKDTRGKRYIEQPDDTAGWRFRPGLQGTDETPKVPTPVEERNSKDAHESIGENKIEPKSEDKF
RDKDRRKKDEKYRDFGARDTERNDRRIGIQLAGGSVERRDIQRDDRDAEKWDRERKDSQKDKEINDREKDSSKKDSLIAV
NKETAMLEKAASDGAVKPAEHESTAAEMKTLKDDTWKSHDNSKDKRREKDVDTGDRHDQRSKYNDKESDDTGPEGDTEKD
KDTFGSIQRRRMARSKGGGQASQREPRFRSKMRDGEGSQGKSEISAIVYKAGECMQELLKSWKEFEATPDARNAENQQNV
PTLEIRIPAEFVTSTNRQVKGAQLWGTDVYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQDSYTSTLRNN
VRSRAWGAGIGCSFRIERCCIVKKGGGAIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLC
NEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFNSSRRYELCFSGERPRPIGSNSNASDLEPEKHQNNSHHHLQ
NGDRGSTEHELRDVFRWSRCKKAMPEVAMRSIGIPLPAEQVEVLQDNLEWEDVQWSQTGVWVSGKEYPLARVHFLSAN*
CDS seq >HORVU.MOREX.r3.3HG0241050.1
ATGAGTGGTGCTCCAAAAAGATTGCATGAGGAGGGTAGCCACTCTACACCTGCGAAACGGCCTTTGGACGAGAGCAGCGT
GTATCCGAGCCCTTCTGGGAAACTCATTCAACCAGGCAGTAGTGATTTCCATGGTTCTTTTGAACATGATGTAAGATTTG
CCAAAATACCGCGTGTTGAGTCGCGTGATGACAAGAGACCATCGCTGACACATCGGATGCCTGTTGCCTCCTCCAACTTT
GTAGACCACACAATCCCATCTGACAGCAGATTAGAATCAAAACAAAACAAAGATGCACGGGACACCAAGGTTGATGATCG
GGAGGCAAAATCTGATGCTCGAGATGTCCATGGTGATAGCAGGATTGAATTTCAAGGCAATAAAGTTGAGACTGATGTAA
AGACAAACAACAGAGCAGATGACAATGAAATAAGAGCTGAGCGAAGGGTGCATGGTGATTTCACAGGCGATGTTGTCAAA
TCAGATAAGGATAGCCATCCTACTGGAACTTCAAACTTAGCCTGGAAAGATAATAAAGACACCAGGGGTAAAAGATATAT
TGAACAGCCAGATGATACTGCAGGTTGGCGTTTCCGTCCTGGTTTGCAAGGCACTGATGAAACTCCCAAGGTTCCAACTC
CTGTGGAAGAACGCAACTCCAAGGATGCACATGAATCTATTGGTGAGAATAAAATAGAACCTAAAAGTGAAGATAAGTTC
AGAGACAAGGACAGGAGAAAGAAAGATGAAAAATATAGAGATTTTGGTGCAAGAGACACTGAAAGAAATGATCGCAGAAT
TGGTATTCAGCTTGCAGGCGGCAGTGTTGAACGAAGAGACATTCAAAGGGATGATCGGGATGCGGAAAAATGGGACAGGG
AAAGAAAAGATTCTCAGAAGGACAAGGAAATCAATGACCGTGAGAAGGATTCTTCCAAGAAGGATTCATTAATAGCAGTT
AACAAGGAGACTGCAATGCTGGAAAAAGCAGCTTCCGATGGAGCTGTTAAACCCGCTGAACATGAGAGTACAGCTGCTGA
AATGAAGACACTTAAAGATGACACATGGAAATCTCATGATAACTCCAAGGACAAGAGAAGAGAGAAGGATGTGGATACAG
GAGACAGGCATGACCAAAGGAGTAAATATAATGACAAAGAATCTGATGATACTGGTCCTGAAGGAGATACAGAGAAAGAT
AAGGATACCTTCGGAAGTATCCAGCGCAGGAGGATGGCACGTTCAAAGGGAGGTGGTCAAGCATCTCAACGAGAACCTCG
GTTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGATATCTGCAATTGTATATAAAGCTGGTGAAT
GCATGCAAGAGCTTCTGAAATCCTGGAAAGAGTTTGAAGCAACCCCAGATGCTAGAAATGCTGAGAATCAACAAAATGTT
CCTACTCTTGAAATTCGGATACCTGCTGAGTTTGTTACTTCCACTAATCGGCAAGTAAAAGGCGCTCAGCTTTGGGGAAC
AGATGTTTATACAAACGATTCAGACCTTGTGGCTGTGTTAATGCATACTGGTTACTGCTCCCCTACATCATCACCCCCAC
CATCTGCCATCCAAGAACTGCGTGCAACTGTCCGTGTGCTACCACCACAAGACAGTTATACTTCAACACTAAGGAACAAT
GTCCGTTCACGTGCTTGGGGTGCTGGTATTGGTTGTAGCTTCCGCATAGAACGCTGCTGCATTGTTAAGAAAGGTGGTGG
TGCCATTGATCTCGAACCTCGCCTTAGCCATACGTCAGCCGTGGAGCCTACACTAGCTCCAGTTGCAGTAGAGCGTACAA
TGACAACAAGAGCAGCAGCTTCTAATGCATTACGTCAACAAAGATTTGTTCGAGAAGTTACAATACAGTACAATCTCTGC
AACGAGCCATGGTTAAAATACAGTATAAGCATTGTGGCAGACAAGGGATTGAAGAAGTCTCTCTATACTTCGGCGAGGCT
GAAAAAGGGTGAAGTCATATACTTGGAAACACATTTCAATAGTTCTCGCAGGTATGAGCTGTGCTTTAGTGGGGAAAGGC
CTCGCCCCATTGGATCAAATTCCAATGCATCCGATTTGGAACCGGAGAAACACCAGAACAATAGCCACCACCATTTGCAA
AACGGTGACAGGGGCTCCACGGAGCATGAACTCCGGGACGTGTTCCGATGGTCACGGTGTAAGAAAGCCATGCCAGAGGT
TGCCATGAGATCTATCGGTATCCCACTGCCAGCTGAACAAGTTGAGGTGCTGCAGGACAATCTGGAGTGGGAGGATGTGC
AGTGGTCGCAGACCGGCGTGTGGGTTTCTGGGAAGGAGTATCCGCTCGCCCGTGTGCATTTCCTCTCGGCCAACTAG
Hv_3H:75163835-75163842:+ does not have available information here.