
Microexon ID | Hv_3H:75163835-75163842:+ |
Species | Hordeum Vulgare | Coordinates | 3H:75163835..75163842 |
Microexon Cluster ID | MEP19 |
Size | 8 |
Phase | 2 |
Pfam Domain Motif | Unknown |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,8,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | GYRKCWMAYCGTGAWCCTCGWTTTMGRTCYMRWAYKCRWGAYRRTGAAGGRTCTCAAGGTAARYCTGARGTRTCWRCYRTTGTTTATAAAGYTGGTGARTGCATGCAA |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GTCTCAAG |
Microexon Amino Acid seq | GSQG |
Microexon-tag DNA Seq | GCATCTCAACGAGAACCTCGGTTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGATATCTGCAATTGTATATAAAGCTGGTGAATGCATGCAA |
Microexon-tag Amino Acid Seq | ASQREPRFRSKMRDGEGSQGKSEISAIVYKAGECMQ |
Microexon-tag spanning region | 75163594-75164333 |
Microexon-tag prediction score | 0.9718 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.3HG0241050.1x |
Reference Transcript ID | HORVU.MOREX.r3.3HG0241050.1 |
Gene ID | HORVU.MOREX.r3.3HG0241050 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.3HG0241050.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.3HG0241050 |
Gene Name | |
Pfam domain motif | Unknown |
Motif E-value | NA |
Motif start | NA |
Motif end | NA |
Protein seq | >HORVU.MOREX.r3.3HG0241050.1 MSGAPKRLHEEGSHSTPAKRPLDESSVYPSPSGKLIQPGSSDFHGSFEHDVRFAKIPRVESRDDKRPSLTHRMPVASSNF VDHTIPSDSRLESKQNKDARDTKVDDREAKSDARDVHGDSRIEFQGNKVETDVKTNNRADDNEIRAERRVHGDFTGDVVK SDKDSHPTGTSNLAWKDNKDTRGKRYIEQPDDTAGWRFRPGLQGTDETPKVPTPVEERNSKDAHESIGENKIEPKSEDKF RDKDRRKKDEKYRDFGARDTERNDRRIGIQLAGGSVERRDIQRDDRDAEKWDRERKDSQKDKEINDREKDSSKKDSLIAV NKETAMLEKAASDGAVKPAEHESTAAEMKTLKDDTWKSHDNSKDKRREKDVDTGDRHDQRSKYNDKESDDTGPEGDTEKD KDTFGSIQRRRMARSKGGGQASQREPRFRSKMRDGEGSQGKSEISAIVYKAGECMQELLKSWKEFEATPDARNAENQQNV PTLEIRIPAEFVTSTNRQVKGAQLWGTDVYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQDSYTSTLRNN VRSRAWGAGIGCSFRIERCCIVKKGGGAIDLEPRLSHTSAVEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQYNLC NEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLETHFNSSRRYELCFSGERPRPIGSNSNASDLEPEKHQNNSHHHLQ NGDRGSTEHELRDVFRWSRCKKAMPEVAMRSIGIPLPAEQVEVLQDNLEWEDVQWSQTGVWVSGKEYPLARVHFLSAN* |
CDS seq | >HORVU.MOREX.r3.3HG0241050.1 ATGAGTGGTGCTCCAAAAAGATTGCATGAGGAGGGTAGCCACTCTACACCTGCGAAACGGCCTTTGGACGAGAGCAGCGT GTATCCGAGCCCTTCTGGGAAACTCATTCAACCAGGCAGTAGTGATTTCCATGGTTCTTTTGAACATGATGTAAGATTTG CCAAAATACCGCGTGTTGAGTCGCGTGATGACAAGAGACCATCGCTGACACATCGGATGCCTGTTGCCTCCTCCAACTTT GTAGACCACACAATCCCATCTGACAGCAGATTAGAATCAAAACAAAACAAAGATGCACGGGACACCAAGGTTGATGATCG GGAGGCAAAATCTGATGCTCGAGATGTCCATGGTGATAGCAGGATTGAATTTCAAGGCAATAAAGTTGAGACTGATGTAA AGACAAACAACAGAGCAGATGACAATGAAATAAGAGCTGAGCGAAGGGTGCATGGTGATTTCACAGGCGATGTTGTCAAA TCAGATAAGGATAGCCATCCTACTGGAACTTCAAACTTAGCCTGGAAAGATAATAAAGACACCAGGGGTAAAAGATATAT TGAACAGCCAGATGATACTGCAGGTTGGCGTTTCCGTCCTGGTTTGCAAGGCACTGATGAAACTCCCAAGGTTCCAACTC CTGTGGAAGAACGCAACTCCAAGGATGCACATGAATCTATTGGTGAGAATAAAATAGAACCTAAAAGTGAAGATAAGTTC AGAGACAAGGACAGGAGAAAGAAAGATGAAAAATATAGAGATTTTGGTGCAAGAGACACTGAAAGAAATGATCGCAGAAT TGGTATTCAGCTTGCAGGCGGCAGTGTTGAACGAAGAGACATTCAAAGGGATGATCGGGATGCGGAAAAATGGGACAGGG AAAGAAAAGATTCTCAGAAGGACAAGGAAATCAATGACCGTGAGAAGGATTCTTCCAAGAAGGATTCATTAATAGCAGTT AACAAGGAGACTGCAATGCTGGAAAAAGCAGCTTCCGATGGAGCTGTTAAACCCGCTGAACATGAGAGTACAGCTGCTGA AATGAAGACACTTAAAGATGACACATGGAAATCTCATGATAACTCCAAGGACAAGAGAAGAGAGAAGGATGTGGATACAG GAGACAGGCATGACCAAAGGAGTAAATATAATGACAAAGAATCTGATGATACTGGTCCTGAAGGAGATACAGAGAAAGAT AAGGATACCTTCGGAAGTATCCAGCGCAGGAGGATGGCACGTTCAAAGGGAGGTGGTCAAGCATCTCAACGAGAACCTCG GTTCCGGTCCAAAATGCGTGATGGTGAAGGGTCTCAAGGTAAATCTGAGATATCTGCAATTGTATATAAAGCTGGTGAAT GCATGCAAGAGCTTCTGAAATCCTGGAAAGAGTTTGAAGCAACCCCAGATGCTAGAAATGCTGAGAATCAACAAAATGTT CCTACTCTTGAAATTCGGATACCTGCTGAGTTTGTTACTTCCACTAATCGGCAAGTAAAAGGCGCTCAGCTTTGGGGAAC AGATGTTTATACAAACGATTCAGACCTTGTGGCTGTGTTAATGCATACTGGTTACTGCTCCCCTACATCATCACCCCCAC CATCTGCCATCCAAGAACTGCGTGCAACTGTCCGTGTGCTACCACCACAAGACAGTTATACTTCAACACTAAGGAACAAT GTCCGTTCACGTGCTTGGGGTGCTGGTATTGGTTGTAGCTTCCGCATAGAACGCTGCTGCATTGTTAAGAAAGGTGGTGG TGCCATTGATCTCGAACCTCGCCTTAGCCATACGTCAGCCGTGGAGCCTACACTAGCTCCAGTTGCAGTAGAGCGTACAA TGACAACAAGAGCAGCAGCTTCTAATGCATTACGTCAACAAAGATTTGTTCGAGAAGTTACAATACAGTACAATCTCTGC AACGAGCCATGGTTAAAATACAGTATAAGCATTGTGGCAGACAAGGGATTGAAGAAGTCTCTCTATACTTCGGCGAGGCT GAAAAAGGGTGAAGTCATATACTTGGAAACACATTTCAATAGTTCTCGCAGGTATGAGCTGTGCTTTAGTGGGGAAAGGC CTCGCCCCATTGGATCAAATTCCAATGCATCCGATTTGGAACCGGAGAAACACCAGAACAATAGCCACCACCATTTGCAA AACGGTGACAGGGGCTCCACGGAGCATGAACTCCGGGACGTGTTCCGATGGTCACGGTGTAAGAAAGCCATGCCAGAGGT TGCCATGAGATCTATCGGTATCCCACTGCCAGCTGAACAAGTTGAGGTGCTGCAGGACAATCTGGAGTGGGAGGATGTGC AGTGGTCGCAGACCGGCGTGTGGGTTTCTGGGAAGGAGTATCCGCTCGCCCGTGTGCATTTCCTCTCGGCCAACTAG |
Hv_3H:75163835-75163842:+ does not have available information here.