
Microexon ID | Vv_11:763974-763981:+ |
Species | Vistis vinifera | Coordinates | 11:763974..763981 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CCTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCACTGGCAAAACCAGGGATTGTGCTCGTGGTTTGTCCTTTAATAGCCTTGATGGAAAACCAAGTGATGGCATTGAAGGAAAAAGGGATTGCTGCAGAATTCCTT |
Microexon-tag Amino Acid Seq | PALAKPGIVLVVCPLIALMENQVMALKEKGIAAEFL |
Microexon-tag spanning region | 763798-764125 |
Microexon-tag prediction score | 0.9712 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_11s0016g00850.t01x |
Reference Transcript ID | VIT_11s0016g00850.t01 |
Gene ID | VIT_11s0016g00850 |
Gene Name | NA |
Transcript ID | VIT_11s0016g00850.t01 |
Protein ID | VIT_11s0016g00850.t01 |
Gene ID | VIT_11s0016g00850 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 3.4e-19 |
Motif start | 41 |
Motif end | 206 |
Protein seq | >VIT_11s0016g00850.t01 MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVL VVCPLIALMENQVMALKEKGIAAEFLSSTQTTKVRDKIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLI AIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVIESLCLQNPLVLKSSFNRPNIYYEVRYKDLL DDVYADLSKLLKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVGIDRKDVRIV CHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSS CRRKKILENFGEQVAASICRKSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSG SEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEENYYQNKFPDKQINKPDKNAISEALRETSKQRLLNALKQT QQRLGNLEINLETSAIFLENECYKKYGKTGKSFYYSQVASTVRWLSTANSTDLTNRLGTKTSSATDNIISKADSPIISSS DQGPTKISNAEHCSAKPQTSSCASPMQGASSQDKGLPPIPSLSDFVKSRTVKGHQANPLSKLRKQSPKRAERNLEKRSRL Q* |
CDS seq | >VIT_11s0016g00850.t01 ATGAAGAAGTCACCATTGCCGGTGCAAAGTGTATCTGGTACTGAGAAGAAAGTATGTGGAAAGGAAGCTCTGGTCAAGCT CTTAAGATGGCATTTTGGGCATGCGGAATTCAGGGGAAGGCAGTTGGAGGCCATTGAAGCCATCTTATCGGGAAGAGATT GTTTTTGTCTCATGCCAACAGGAGGAGGAAAGTCAATGTGTTATCAGATTCCTGCACTGGCAAAACCAGGGATTGTGCTC GTGGTTTGTCCTTTAATAGCCTTGATGGAAAACCAAGTGATGGCATTGAAGGAAAAAGGGATTGCTGCAGAATTCCTTTC CTCAACTCAGACCACAAAAGTTAGAGATAAGATCCATGAAGACCTTCAATCTGGAAAACCATCCTTAAGGCTACTGTATG TAACACCAGAATTGATTGCAACACCAGGGTTTATGTCAAGGTTGACAAAGATTCATGCTAGAGGGTTGCTGAATCTGATT GCCATAGATGAGGCTCATTGCATTTCTTCATGGGGACATGACTTCAGGCCTAGCTACCGGAAACTTTCATCTTTGAGGAA CCACCTCCCAGATGTACCAATATTGGCATTAACAGCCACAGCTGTTCCTAAGGTTCAGAAGGATGTGATAGAGTCCTTGT GCTTGCAAAATCCTTTAGTCCTAAAATCATCATTCAATCGTCCTAATATATACTATGAAGTTCGATACAAAGATCTGTTG GATGATGTCTATGCTGATCTATCTAAGCTACTCAAATCTTGTGGGAATGTTTGTGGAATTGTTTACTGCCTTGAGCGTAC TACTTGTGATGAATTGTCTGCTCATCTATCAAAAAATGGCATCTCTTCTGCTGCTTATCATGCAGGGCTAAACAATAAAT TACGGAGTTCCGTCTTAGATGATTGGATTTCTTCTAAGATACAAGTTGTTGGCATAGACAGAAAGGATGTCAGAATCGTT TGCCACTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGTAGAGCTGGTCGAGATCAATTGCCCTCACG GAGTCTCTTGTACTATGGGATAGATGACCGCAAAAGAATGGAATTTATTCTGAGCAATGCAGAGAGCAAGAAGTTGCAGT CCTCGAGTTCGCAGGATGGGATGTCAAAAAAGTCTCTTGCCGATTTCAGTCATATGGTTGAATACTGTGAAGGATCTAGT TGCCGAAGAAAAAAAATCCTTGAGAATTTTGGGGAACAGGTAGCTGCATCAATATGTAGAAAATCATGTGATGCCTGTAA ACATCCAAATCTAGTTGCAAAGTATTTGGAGGAGTTTGCATCTGCCTGTGCTCTTCGCCAGAACAATGTATTCTCTCGAA TTTTTATCAGCAGCTCCTCTGATCTGGTTGATAAAGAGCAACTCACCGAATTCTGGAATCGTGATGATGAAGTAAGCGGT TCCGAGGAAGATATATCCGATTCTGATGATGGTATTGAGGTTGGGAAGAGTATGGCCAGGCCTAAGTTACCATCAAAGTC AGGACTAAGTGAGAAGATTGAGTTATTGCAACGTGCAGAAGAGAATTATTACCAGAATAAATTCCCTGACAAGCAGATCA ATAAACCAGACAAGAATGCCATATCAGAGGCCCTCAGAGAAACAAGCAAGCAAAGATTATTAAATGCCCTAAAGCAAACC CAGCAGCGACTTGGCAACTTAGAGATTAACTTAGAAACATCAGCCATCTTCCTTGAAAATGAGTGCTACAAGAAATACGG GAAGACTGGGAAATCCTTCTATTATTCACAAGTGGCAAGCACAGTGAGGTGGCTATCAACTGCAAATTCAACAGACTTAA CAAACCGGCTTGGCACCAAAACCAGTTCGGCCACAGACAACATTATCTCTAAAGCAGATTCTCCTATAATTTCCTCCTCA GACCAAGGTCCAACAAAAATTAGCAATGCAGAGCACTGCAGTGCTAAACCACAAACTTCTTCGTGTGCTTCTCCAATGCA GGGTGCTTCTTCCCAAGATAAAGGTCTACCACCTATTCCATCCTTATCTGACTTTGTGAAGAGCAGAACAGTAAAAGGCC ATCAAGCAAACCCTTTATCTAAGTTGAGAAAACAGTCTCCAAAAAGAGCTGAGAGGAATCTGGAGAAGAGGTCAAGGTTG CAGTAA |
Microexon DNA seq | CCTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCACTGGCAAAACCAGGGATTGTGCTCGTGGTTTGTCCTTTAATAGCCTTGATGGAAAACCAAGTGATGGCATTGAAGGAAAAAGGGATTGCTGCAGAATTCCTT |
Microexon-tag Amino Acid seq | PALAKPGIVLVVCPLIALMENQVMALKEKGIAAEFL |
Transcript ID | Vv.3183.3 |
Gene ID | Vv.3183 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 3.5e-19 |
Motif start | 41 |
Motif end | 206 |
Protein seq | >Vv.3183.3 MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVL VVCPLIALMENQVMALKEKGIAAEFLSSTQTTKVRDKIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLI AIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVIESLCLQNPLVLKSSFNRPNIYYEVRYKDLL DDVYADLSKLLKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGI DRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLADFSHM VEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFW NRDDEVSGSEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEENYYQNKFPDKQINKPDKNAISEALRETSKQR LLNALKQTQQRLGNLEINLETSAIFLENECYKKYGKTGKSFYYSQVASTVRWLSTANSTDLTNRLGTKTSSATDNIISKA DSPIISSSDQGPTKISNAEHCSAKPQTSSCASPMQGASSQDKGLPPIPSLSDFVKSRTVKGHQANPLSKLRKQSPKRAER NLEKRSRLQ* |
CDS seq | >Vv.3183.3 ATGAAGAAGTCACCATTGCCGGTGCAAAGTGTATCTGGTACTGAGAAGAAAGTATGTGGAAAGGAAGCTCTGGTCAAGCT CTTAAGATGGCATTTTGGGCATGCGGAATTCAGGGGAAGGCAGTTGGAGGCCATTGAAGCCATCTTATCGGGAAGAGATT GTTTTTGTCTCATGCCAACAGGAGGAGGAAAGTCAATGTGTTATCAGATTCCTGCACTGGCAAAACCAGGGATTGTGCTC GTGGTTTGTCCTTTAATAGCCTTGATGGAAAACCAAGTGATGGCATTGAAGGAAAAAGGGATTGCTGCAGAATTCCTTTC CTCAACTCAGACCACAAAAGTTAGAGATAAGATCCATGAAGACCTTCAATCTGGAAAACCATCCTTAAGGCTACTGTATG TAACACCAGAATTGATTGCAACACCAGGGTTTATGTCAAGGTTGACAAAGATTCATGCTAGAGGGTTGCTGAATCTGATT GCCATAGATGAGGCTCATTGCATTTCTTCATGGGGACATGACTTCAGGCCTAGCTACCGGAAACTTTCATCTTTGAGGAA CCACCTCCCAGATGTACCAATATTGGCATTAACAGCCACAGCTGTTCCTAAGGTTCAGAAGGATGTGATAGAGTCCTTGT GCTTGCAAAATCCTTTAGTCCTAAAATCATCATTCAATCGTCCTAATATATACTATGAAGTTCGATACAAAGATCTGTTG GATGATGTCTATGCTGATCTATCTAAGCTACTCAAATCTTGTGGGAATGTTTGTGGAATTGTTTACTGCCTTGAGCGTAC TACTTGTGATGAATTGTCTGCTCATCTATCAAAAAATGGCATCTCTTCTGCTGCTTATCATGCAGGGCTAAACAATAAAT TACGGAGTTCCGTCTTAGATGATTGGATTTCTTCTAAGATACAAGTTGTTGTGGCCACTGTGGCCTTCGGGATGGGCATA GACAGAAAGGATGTCAGAATCGTTTGCCACTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGTAGAGC TGGTCGAGATCAATTGCCCTCACGGAGTCTCTTGTACTATGGGATAGATGACCGCAAAAGAATGGAATTTATTCTGAGCA ATGCAGAGAGCAAGAAGTTGCAGTCCTCGAGTTCGCAGGATGGGATGTCAAAAAAGTCTCTTGCCGATTTCAGTCATATG GTTGAATACTGTGAAGGATCTAGTTGCCGAAGAAAAAAAATCCTTGAGAATTTTGGGGAACAGGTAGCTGCATCAATATG TAGAAAATCATGTGATGCCTGTAAACATCCAAATCTAGTTGCAAAGTATTTGGAGGAGTTTGCATCTGCCTGTGCTCTTC GCCAGAACAATGTATTCTCTCGAATTTTTATCAGCAGCTCCTCTGATCTGGTTGATAAAGAGCAACTCACCGAATTCTGG AATCGTGATGATGAAGTAAGCGGTTCCGAGGAAGATATATCCGATTCTGATGATGGTATTGAGGTTGGGAAGAGTATGGC CAGGCCTAAGTTACCATCAAAGTCAGGACTAAGTGAGAAGATTGAGTTATTGCAACGTGCAGAAGAGAATTATTACCAGA ATAAATTCCCTGACAAGCAGATCAATAAACCAGACAAGAATGCCATATCAGAGGCCCTCAGAGAAACAAGCAAGCAAAGA TTATTAAATGCCCTAAAGCAAACCCAGCAGCGACTTGGCAACTTAGAGATTAACTTAGAAACATCAGCCATCTTCCTTGA AAATGAGTGCTACAAGAAATACGGGAAGACTGGGAAATCCTTCTATTATTCACAAGTGGCAAGCACAGTGAGGTGGCTAT CAACTGCAAATTCAACAGACTTAACAAACCGGCTTGGCACCAAAACCAGTTCGGCCACAGACAACATTATCTCTAAAGCA GATTCTCCTATAATTTCCTCCTCAGACCAAGGTCCAACAAAAATTAGCAATGCAGAGCACTGCAGTGCTAAACCACAAAC TTCTTCGTGTGCTTCTCCAATGCAGGGTGCTTCTTCCCAAGATAAAGGTCTACCACCTATTCCATCCTTATCTGACTTTG TGAAGAGCAGAACAGTAAAAGGCCATCAAGCAAACCCTTTATCTAAGTTGAGAAAACAGTCTCCAAAAAGAGCTGAGAGG AATCTGGAGAAGAGGTCAAGGTTGCAGTAA |