Microexon ID Sb_4:65454899-65454906:-
Species Sorghum   Bicolor
Coordinates 4:65454899..65454906
Microexon Cluster ID MEP18
Size 8
Phase 1
Pfam Domain Motif DEAD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CGCTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCAGCTCTGGTGAAGACAGGCATTGTTCTTGTCATTTCACCCTTGATAGCGCTGATGGAGAACCAGGTTGCCAGCTTGAAAAATAAAGGGATTCCAGCTGAATTTCTC
Microexon-tag Amino Acid Seq PALVKTGIVLVISPLIALMENQVASLKNKGIPAEFL
Microexon-tag spanning region65454762-65455053
Microexon-tag prediction score0.9575
Overlapped with the annotated transcript (%) 100
New Transcript ID KXG31219x
Reference Transcript ID KXG31219
Gene ID SORBI_3004G319400
Gene Name NA
Transcript ID KXG31219
Protein ID
Gene ID SORBI_3004G319400
Gene Name
Pfam domain motif DEAD
Motif E-value 1.10E-25
Motif start 38
Motif end 202
Protein seq >KXG31219
MKGVLQIKGASGREKKAPKELESVLNQYFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQVPALVKTGIVLVIS
PLIALMENQVASLKNKGIPAEFLSSTQASHTKQRIHEDLDTGNPSLKLLYVTPELVATSGFMAKLKKLYNRGLLGLVAID
EAHCISTWGHDFRPSYRKLSSLRKQFPDIPLLALTATAVPKVQKDVISSLCLQNPVILRASFNRPNIFYEVRYKDLLDDV
YSDISNLLKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLDDWLSSRTQVVVATVAFGMGIDRQ
DVRIVCHFNLPKSMESFYQESGRAGRDQRPSRSVLYYGLDDRRRMEFILRNPKINKAQPSSSSNELSEKALADFSQIVDY
CESSSCRRKKIIESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPNCRFNKISPVFQSSVKPAHLDTEFWNREDEAS
ISAEDISDSDDGNEVVSNIAISKVPAKAGLDAKFKALERAENAYYQGKGQTKQQGGGLADKKSISQTLRDACRKRLLDAL
GQAKLRLGNIPCDDEASATHLETECFKKYEKVGKTFYNSQIAATVRWLSSATSSQMHDRLHAVIDQTKDDGASGSPDIVP
ESPPASPKIVGTKPGETSNYEADVKPQHICKLGKRGHSDVSTEGAAASTGNMELPSIPTGNMVLPAIPTFREFLSQKGRD
RAKSYSNSQPSGIRRKSSGQVDKEETSKRMKS*
CDS seq >KXG31219
ATGAAAGGCGTACTTCAGATTAAGGGGGCATCAGGGCGTGAAAAGAAGGCTCCTAAGGAGCTCGAGAGTGTCTTGAACCA
ATATTTCGGATATTCGGGATTTCGAGGAAAACAACTGGAAGCTATAGAAGCTGTTCTATCAGGAAGAGATTGCTTTTGTT
TGATGCCAACTGGCGGTGGAAAGTCCATGTGCTATCAGGTTCCAGCTCTGGTGAAGACAGGCATTGTTCTTGTCATTTCA
CCCTTGATAGCGCTGATGGAGAACCAGGTTGCCAGCTTGAAAAATAAAGGGATTCCAGCTGAATTTCTCTCATCAACACA
GGCATCTCACACTAAACAAAGGATACATGAAGACCTTGATACTGGTAATCCTTCTTTAAAGTTGCTATATGTCACTCCTG
AGCTTGTTGCAACATCAGGCTTTATGGCAAAGCTAAAGAAGCTCTACAACAGAGGTCTTCTTGGTCTTGTTGCTATTGAT
GAGGCTCACTGTATTTCGACTTGGGGCCATGATTTCAGACCTAGCTATCGCAAGCTTTCATCATTGAGGAAGCAGTTCCC
AGATATCCCTTTGTTAGCTTTAACTGCAACTGCTGTCCCGAAGGTCCAGAAAGATGTGATATCATCACTGTGCCTGCAAA
ATCCAGTGATTCTTAGAGCTTCATTTAATCGACCCAATATATTCTATGAAGTTCGTTACAAGGATCTTCTTGATGATGTT
TACTCTGATATATCAAATTTACTGAAGTCAAGCGGAAATGCTTGCTCAATTATATATTGTCTTGAACGGGCAGCTTGTGA
TGATCTAAGCATGCATTTGTCACAGCAGGGTGTCTCTTCTGCTGCTTATCATGCTGGCCTAAATAGCAAAGTGCGAAGTT
CTGTTCTCGATGACTGGCTTTCGTCGAGAACTCAAGTTGTTGTTGCAACTGTAGCCTTTGGAATGGGTATTGATAGACAA
GATGTCCGTATTGTATGCCACTTCAACTTGCCTAAGTCAATGGAATCCTTCTATCAGGAGTCAGGTCGAGCTGGTCGTGA
TCAACGACCTTCAAGAAGTGTTTTGTATTACGGATTAGATGACCGGAGGAGAATGGAATTCATTTTGAGAAACCCCAAAA
TTAACAAAGCACAACCGTCTTCCTCTTCAAATGAGCTTTCTGAGAAGGCTCTAGCTGACTTCAGTCAGATTGTTGACTAC
TGTGAAAGTTCTAGCTGCCGGCGAAAAAAGATCATTGAGAGCTTTGGAGAGAAAGTACAACCAACTTTATGCCAACGCTC
ATGTGATGCTTGCAAGCACCCAAATTTAGTGTCGTCACGTCTGGAGGAACTCCGTCGTGTGCCCAACTGTCGCTTTAATA
AGATCTCCCCAGTGTTTCAAAGCTCAGTTAAACCAGCACACTTGGACACAGAATTCTGGAATCGTGAAGATGAGGCAAGC
ATATCGGCTGAAGACATCTCAGATTCTGATGATGGGAATGAGGTGGTGAGTAATATAGCCATTTCAAAGGTTCCAGCAAA
AGCTGGTCTGGATGCAAAATTTAAAGCTCTGGAGCGTGCTGAAAATGCTTATTACCAAGGAAAAGGTCAGACCAAGCAGC
AGGGTGGTGGCCTTGCTGACAAGAAAAGCATCTCTCAGACGCTAAGAGATGCATGCCGGAAAAGATTGTTGGATGCTCTT
GGACAAGCAAAGCTGCGACTTGGGAATATTCCGTGCGACGACGAGGCTTCTGCTACACACCTTGAAACAGAGTGCTTCAA
AAAATATGAGAAAGTGGGCAAGACGTTCTACAACTCACAGATAGCCGCCACAGTTCGGTGGCTGTCATCCGCAACATCCA
GTCAGATGCACGACCGCCTCCATGCTGTTATCGACCAAACTAAAGATGATGGTGCATCAGGCTCCCCCGACATTGTTCCA
GAGTCACCTCCAGCATCTCCTAAAATCGTCGGCACAAAGCCAGGAGAAACCAGTAACTATGAAGCTGACGTCAAACCACA
GCATATTTGTAAGTTGGGGAAAAGGGGACATTCAGATGTGTCTACAGAGGGTGCTGCGGCATCGACTGGGAACATGGAGC
TCCCCTCAATACCAACTGGGAACATGGTGCTCCCCGCGATACCAACGTTCAGAGAATTCTTGAGCCAAAAAGGAAGGGAT
CGGGCAAAGAGCTATTCAAATTCCCAGCCATCTGGTATTCGTAGGAAGTCTAGTGGTCAGGTTGATAAGGAAGAAACCAG
CAAGAGGATGAAATCATGA
Sb_4:65454899-65454906:- does not have available information here.