
Microexon ID | Ps_NW_020631041.1:18108387-18108394:- |
Species | Papaver somniferum | Coordinates | NW_020631041.1:18108387..18108394 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CGTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCAGCACTATCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCTTTAATAGCGTTGATGGAAAACCAAGTCAAGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC |
Microexon-tag Amino Acid Seq | PALSKAGIVLVVCPLIALMENQVKALKEKGIRAEYL |
Microexon-tag spanning region | 18108242-18108568 |
Microexon-tag prediction score | 0.9572 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026585511.1x |
Reference Transcript ID | XM_026585511.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026585511.1 |
Protein ID | XP_026441296.1 |
Gene ID | LOC113340303 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 2.5e-19 |
Motif start | 46 |
Motif end | 211 |
Protein seq | >XP_026441296.1 MRKFLLPMQSVDKVDNKKEKNKSWDKESLVKILKQHFGYSEFRGKQLEAVEAILSGRDCFCLMPTGGGKSMCYQIPALSK AGIVLVVCPLIALMENQVKALKEKGIRAEYLSSTQTSKVREKILEELNYGKPSLRLLYVTPELIATQGFMPKLTKLHSRG LLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPGVPILALTATAVPKVQKDVMDSLCLQQPLVLRSSFNRPNIYYEVR YKDLLEDVYFDMSNQFKSSGNVCGIIYCLERTACDDLSAHLLKNGVSCAAYHAGLNSKQRSSVLDNWLSSKVQVVVATVA FGMGIDRKDVRIVCHFNIPKSMESFYQESGRAGRDQKPSRSLLYYGMDDRRKMEFILSKSQNKQANSSNSEGGSSKKALA DFSQMVEYCEKSSCRRKKILENFEEKVPTSLCNKSCDACKSPNVVAKSLEELTLSAYQRTGFSRVFINSSSSVASEDRYT EFWNRDDEASASEEDISDSDDAEELVNNLSGSKFSSKSGLNEKLAILQRAEEKYYQAEAPSKEKNSVDKKSISESLRTAI KQRLLNTLKQTEQRLGILKIDLEASAAFLEDECYKKYAKVGKTFYNSQMASTVRWLSTSSMVEIMNRLSSCVTQDPSTPK PSDDPSTASSLSMNPDMQDQNSLEVGEEEVQIVVDSSTSIETPMIPTSSETIHHLPPIPSFAEFVTQKGKNGQSNISSTS RSEKHSSTRTSKEDDAAEKRMRLH* |
CDS seq | >XM_026585511.1 ATGAGGAAATTTCTATTGCCGATGCAAAGTGTAGATAAAGTGGATAATAAGAAGGAGAAGAATAAGTCTTGGGATAAAGA AAGTTTAGTGAAGATTTTGAAACAACATTTTGGGTATTCTGAATTCAGAGGGAAACAATTAGAAGCTGTTGAAGCTATTT TATCAGGAAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGAAAGTCCATGTGTTACCAGATCCCAGCACTATCAAAA GCAGGAATTGTTCTTGTTGTGTGTCCTTTAATAGCGTTGATGGAAAACCAAGTCAAGGCACTAAAGGAGAAAGGGATTCG TGCAGAATATCTCTCTTCGACTCAAACCTCCAAAGTCAGAGAAAAGATTCTTGAGGAGCTCAACTATGGAAAGCCGTCAC TAAGGCTACTTTATGTAACACCAGAACTGATTGCAACACAGGGGTTTATGCCAAAGCTGACAAAGCTCCACTCTAGAGGC TTATTGAATCTCATTGCCATAGATGAGGCACATTGCATTTCATCATGGGGACACGATTTCAGGCCCAGCTACCGCAAACT TTCTTCTCTGCGGAATCACCTTCCAGGGGTACCAATACTGGCCTTGACAGCTACAGCTGTTCCTAAGGTTCAGAAGGATG TGATGGATTCTTTATGCTTGCAACAGCCATTAGTCCTCAGATCATCATTTAATCGTCCTAATATATACTACGAAGTTCGG TATAAAGACCTTCTGGAAGATGTCTACTTTGATATGTCTAATCAATTCAAGTCTAGTGGAAATGTATGTGGAATCATTTA TTGCCTTGAGCGTACAGCTTGTGATGATTTATCAGCTCATCTATTAAAGAATGGCGTCTCTTGTGCAGCTTACCATGCTG GATTGAACAGTAAACAGCGAAGCTCAGTTTTAGACAACTGGTTGTCTTCCAAAGTACAAGTGGTTGTAGCAACTGTTGCT TTTGGCATGGGAATAGATAGAAAGGATGTTAGGATTGTTTGCCATTTCAATATCCCGAAGTCAATGGAATCCTTCTATCA AGAGTCTGGAAGAGCTGGACGTGATCAGAAACCTTCAAGAAGTTTGTTATATTATGGGATGGATGATCGCAGAAAAATGG AATTTATTCTTAGTAAATCACAAAACAAGCAGGCAAACTCTTCCAACTCGGAGGGTGGCTCGTCCAAGAAAGCATTAGCT GACTTCAGTCAGATGGTGGAGTATTGCGAAAAATCTAGTTGCCGACGGAAAAAAATTCTTGAGAATTTTGAAGAAAAAGT ACCTACATCATTATGTAACAAATCCTGCGATGCCTGCAAGAGCCCAAATGTAGTTGCTAAGAGTCTCGAAGAGCTTACTC TTTCTGCTTACCAGAGGACTGGATTCTCTCGTGTCTTTATCAACAGTTCGTCATCCGTGGCTTCTGAAGATCGTTACACA GAGTTCTGGAACCGTGATGACGAAGCAAGTGCTTCTGAAGAAGATATATCTGATTCTGATGATGCAGAAGAACTTGTGAA CAACTTGTCAGGGTCAAAATTCTCATCAAAATCCGGATTAAACGAGAAATTGGCAATTTTGCAGCGGGCAGAAGAGAAAT ACTATCAGGCAGAAGCCCCTTCAAAAGAGAAGAACAGCGTTGACAAGAAGTCCATATCTGAATCCCTAAGAACAGCTATC AAACAAAGGTTATTGAACACTCTAAAACAGACTGAGCAACGTCTTGGAATCTTAAAGATAGATTTGGAGGCTTCTGCAGC TTTTCTTGAAGACGAGTGTTACAAGAAGTACGCGAAAGTTGGGAAGACATTCTATAATTCACAAATGGCAAGTACGGTGA GGTGGTTATCTACCTCAAGTATGGTGGAGATAATGAACCGGCTTAGCTCCTGTGTCACTCAGGACCCCTCTACTCCCAAG CCATCAGATGACCCATCAACAGCTTCTTCCCTTTCCATGAATCCAGATATGCAAGATCAAAATTCGCTAGAAGTTGGTGA AGAGGAAGTCCAAATTGTTGTTGATTCAAGTACTTCCATAGAAACACCCATGATTCCAACTTCCTCCGAAACAATACACC ATCTTCCTCCAATTCCATCATTTGCAGAGTTTGTTACTCAGAAAGGGAAAAACGGTCAATCAAATATTTCTTCTACGTCA AGATCCGAGAAGCATTCATCTACAAGAACATCAAAAGAAGATGATGCTGCAGAGAAAAGAATGAGACTGCACTAG |
Microexon DNA seq | CGTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCAGCACTATCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCTTTAATAGCGTTGATGGAAAACCAAGTCAAGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC |
Microexon-tag Amino Acid seq | PALSKAGIVLVVCPLIALMENQVKALKEKGIRAEYL |
Transcript ID | Ps.79580.1 |
Gene ID | Ps.79580 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 2.5e-19 |
Motif start | 46 |
Motif end | 211 |
Protein seq | >Ps.79580.1 MRKFLLPMQSVDKVDNKKEKNKSWDKESLVKILKQHFGYSEFRGKQLEAVEAILSGRDCFCLMPTGGGKSMCYQIPALSK AGIVLVVCPLIALMENQVKALKEKGIRAEYLSSTQTSKVREKILEELNYGKPSLRLLYVTPELIATQGFMPKLTKLHSRG LLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPGVPILALTATAVPKVQKDVMDSLCLQQPLVLRSSFNRPNIYYEVR YKDLLEDVYFDMSNQFKSSGNVCGIIYCLERTACDDLSAHLLKNGVSCAAYHAGLNSKQRSSVLDNWLSSKVQVVVATVA FGMGIDRKDVRIVCHFNIPKSMESFYQESGRAGRDQKPSRSLLYYGMDDRRKMEFILSKSQNKQANSSNSEGGSSKKALA DFSQMVEYCEKSSCRRKKILENFEEKVPTSLCNKSCDACKSPNVVAKSLEELTLSAYQRTGFSRVFINSSSSVASEDRYT EFWNRDDEASASEEDISDSDDAEELVNNLSGSKFSSKSGLNEKLAILQRAEEKYYQAEAPSKEKNSVDKKSISESLRTAI KQRLLNTLKQTEQRLGILKIDLEASAAFLEDECYKKYAKVGKTFYNSQMASTVRWLSTSSMVEIMNRLSSCVTQDPSTPK PSDDPSTASSLSMNPDMQDQNSLEVGEEEVQIVVDSSTSIETPMIPTSSETIHHLPPIPSFAEFVTQKGKNGQSNISSTS RSEKHSSTRTSKEDDAAEKRMRLH* |
CDS seq | >Ps.79580.1 ATGAGGAAATTTCTATTGCCGATGCAAAGTGTAGATAAAGTGGATAATAAGAAGGAGAAGAATAAGTCTTGGGATAAAGA AAGTTTAGTGAAGATTTTGAAACAACATTTTGGGTATTCTGAATTCAGAGGGAAACAATTAGAAGCTGTTGAAGCTATTT TATCAGGAAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGAAAGTCCATGTGTTACCAGATCCCAGCACTATCAAAA GCAGGAATTGTTCTTGTTGTGTGTCCTTTAATAGCGTTGATGGAAAACCAAGTCAAGGCACTAAAGGAGAAAGGGATTCG TGCAGAATATCTCTCTTCGACTCAAACCTCCAAAGTCAGAGAAAAGATTCTTGAGGAGCTCAACTATGGAAAGCCGTCAC TAAGGCTACTTTATGTAACACCAGAACTGATTGCAACACAGGGGTTTATGCCAAAGCTGACAAAGCTCCACTCTAGAGGC TTATTGAATCTCATTGCCATAGATGAGGCACATTGCATTTCATCATGGGGACACGATTTCAGGCCCAGCTACCGCAAACT TTCTTCTCTGCGGAATCACCTTCCAGGGGTACCAATACTGGCCTTGACAGCTACAGCTGTTCCTAAGGTTCAGAAGGATG TGATGGATTCTTTATGCTTGCAACAGCCATTAGTCCTCAGATCATCATTTAATCGTCCTAATATATACTACGAAGTTCGG TATAAAGACCTTCTGGAAGATGTCTACTTTGATATGTCTAATCAATTCAAGTCTAGTGGAAATGTATGTGGAATCATTTA TTGCCTTGAGCGTACAGCTTGTGATGATTTATCAGCTCATCTATTAAAGAATGGCGTCTCTTGTGCAGCTTACCATGCTG GATTGAACAGTAAACAGCGAAGCTCAGTTTTAGACAACTGGTTGTCTTCCAAAGTACAAGTGGTTGTAGCAACTGTTGCT TTTGGCATGGGAATAGATAGAAAGGATGTTAGGATTGTTTGCCATTTCAATATCCCGAAGTCAATGGAATCCTTCTATCA AGAGTCTGGAAGAGCTGGACGTGATCAGAAACCTTCAAGAAGTTTGTTATATTATGGGATGGATGATCGCAGAAAAATGG AATTTATTCTTAGTAAATCACAAAACAAGCAGGCAAACTCTTCCAACTCGGAGGGTGGCTCGTCCAAGAAAGCATTAGCT GACTTCAGTCAGATGGTGGAGTATTGCGAAAAATCTAGTTGCCGACGGAAAAAAATTCTTGAGAATTTTGAAGAAAAAGT ACCTACATCATTATGTAACAAATCCTGCGATGCCTGCAAGAGCCCAAATGTAGTTGCTAAGAGTCTCGAAGAGCTTACTC TTTCTGCTTACCAGAGGACTGGATTCTCTCGTGTCTTTATCAACAGTTCGTCATCCGTGGCTTCTGAAGATCGTTACACA GAGTTCTGGAACCGTGATGACGAAGCAAGTGCTTCTGAAGAAGATATATCTGATTCTGATGATGCAGAAGAACTTGTGAA CAACTTGTCAGGGTCAAAATTCTCATCAAAATCCGGATTAAACGAGAAATTGGCAATTTTGCAGCGGGCAGAAGAGAAAT ACTATCAGGCAGAAGCCCCTTCAAAAGAGAAGAACAGCGTTGACAAGAAGTCCATATCTGAATCCCTAAGAACAGCTATC AAACAAAGGTTATTGAACACTCTAAAACAGACTGAGCAACGTCTTGGAATCTTAAAGATAGATTTGGAGGCTTCTGCAGC TTTTCTTGAAGACGAGTGTTACAAGAAGTACGCGAAAGTTGGGAAGACATTCTATAATTCACAAATGGCAAGTACGGTGA GGTGGTTATCTACCTCAAGTATGGTGGAGATAATGAACCGGCTTAGCTCCTGTGTCACTCAGGACCCCTCTACTCCCAAG CCATCAGATGACCCATCAACAGCTTCTTCCCTTTCCATGAATCCAGATATGCAAGATCAAAATTCGCTAGAAGTTGGTGA AGAGGAAGTCCAAATTGTTGTTGATTCAAGTACTTCCATAGAAACACCCATGATTCCAACTTCCTCCGAAACAATACACC ATCTTCCTCCAATTCCATCATTTGCAGAGTTTGTTACTCAGAAAGGGAAAAACGGTCAATCAAATATTTCTTCTACGTCA AGATCCGAGAAGCATTCATCTACAAGAACATCAAAAGAAGATGATGCTGCAGAGAAAAGAATGAGACTGCACTAG |