Microexon ID Ps_NW_020618825.1:17290395-17290402:-
Species Papaver somniferum
Coordinates NW_020618825.1:17290395..17290402
Microexon Cluster ID MEP18
Size 8
Phase 1
Pfam Domain Motif DEAD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CTTTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAAAATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTT
Microexon-tag Amino Acid Seq PALAKSGIGLVVSPLIALMENQVMALKGKGIAAEYL
Microexon-tag spanning region17290262-17290543
Microexon-tag prediction score0.963
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026574575.1x
Reference Transcript ID XM_026574575.1
Gene ID NA
Gene Name NA
Transcript ID XM_026574575.1
Protein ID XP_026430360.1
Gene ID LOC113326913
Gene Name NA
Pfam domain motif DEAD
Motif E-value 1.4e-16
Motif start 31
Motif end 194
Protein seq >XP_026430360.1
MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME
NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG
HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEVRYKDLLDDVYADLSKQLK
SNGDVCGIIYCLERTTCEDLSAHLLENGITSAAYHAGLNSEQRSTVLENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFN
IPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGITLSALLEFILRELENEHANSSSSVSDSSKKALADFNQMVEYC
KESGCRRRKILKSFEEKVSALCSGTCDACKNPFLVAKNLEELARSARRMTTFTCNVSRHFYN*
CDS seq >XM_026574575.1
ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT
CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA
AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA
AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA
GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT
CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA
CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC
TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA
ACCGTCCTAATATATTTTATGAAGTTCGTTATAAAGATCTTCTGGATGATGTCTATGCTGATTTGTCTAAGCAACTCAAG
TCTAATGGAGATGTATGCGGAATCATTTATTGCCTTGAACGTACAACATGTGAAGATTTGTCAGCTCATCTGTTAGAGAA
TGGCATCACTTCCGCCGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTTACTTCCA
AAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAAT
ATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTTTGTTATA
CTATGGAACGGATGATCGCAGAAAAATGGGTATAACACTATCTGCATTATTAGAATTTATTCTCCGTGAACTAGAGAACG
AGCATGCAAACTCTTCAAGCTCCGTCAGTGACTCATCTAAAAAAGCCTTGGCAGACTTCAATCAGATGGTTGAATATTGC
AAAGAATCTGGGTGCCGCAGGAGAAAAATTCTCAAGAGCTTTGAGGAAAAGGTATCTGCACTATGTAGCGGAACATGTGA
TGCCTGCAAGAATCCATTTTTAGTTGCTAAGAACCTGGAGGAACTTGCTCGTTCTGCTCGTCGAATGACTACCTTCACTT
GTAACGTAAGCAGACACTTTTATAACTAG
Microexon DNA seq CTTTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAAAATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTT
Microexon-tag Amino Acid seq PALAKSGIGLVVSPLIALMENQVMALKGKGIAAEYL
Transcript ID XR_003348595.1
Gene ID Ps.69429
Gene Name NA
Pfam domain motif DEAD
Motif E-value 5.6e-17
Motif start 31
Motif end 194
Protein seq >XR_003348595.1
MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME
NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG
HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEAYHAGLNSEQRSTVLENWL
TSKVQVVVATVAFGMGIDKKDVRIVCHFNIPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGIYSP*
CDS seq >XR_003348595.1
ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT
CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA
AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA
AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA
GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT
CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA
CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC
TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA
ACCGTCCTAATATATTTTATGAAGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTT
ACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCA
TTTCAATATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTT
TGTTATACTATGGAACGGATGATCGCAGAAAAATGGGAATTTATTCTCCGTGA