
Microexon ID | Ps_NW_020618825.1:17290395-17290402:- |
Species | Papaver somniferum | Coordinates | NW_020618825.1:17290395..17290402 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CTTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAAAATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTT |
Microexon-tag Amino Acid Seq | PALAKSGIGLVVSPLIALMENQVMALKGKGIAAEYL |
Microexon-tag spanning region | 17290262-17290543 |
Microexon-tag prediction score | 0.963 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026574575.1x |
Reference Transcript ID | XM_026574575.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026574575.1 |
Protein ID | XP_026430360.1 |
Gene ID | LOC113326913 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 1.4e-16 |
Motif start | 31 |
Motif end | 194 |
Protein seq | >XP_026430360.1 MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEVRYKDLLDDVYADLSKQLK SNGDVCGIIYCLERTTCEDLSAHLLENGITSAAYHAGLNSEQRSTVLENWLTSKVQVVVATVAFGMGIDKKDVRIVCHFN IPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGITLSALLEFILRELENEHANSSSSVSDSSKKALADFNQMVEYC KESGCRRRKILKSFEEKVSALCSGTCDACKNPFLVAKNLEELARSARRMTTFTCNVSRHFYN* |
CDS seq | >XM_026574575.1 ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA ACCGTCCTAATATATTTTATGAAGTTCGTTATAAAGATCTTCTGGATGATGTCTATGCTGATTTGTCTAAGCAACTCAAG TCTAATGGAGATGTATGCGGAATCATTTATTGCCTTGAACGTACAACATGTGAAGATTTGTCAGCTCATCTGTTAGAGAA TGGCATCACTTCCGCCGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTTACTTCCA AAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCATTTCAAT ATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTTTGTTATA CTATGGAACGGATGATCGCAGAAAAATGGGTATAACACTATCTGCATTATTAGAATTTATTCTCCGTGAACTAGAGAACG AGCATGCAAACTCTTCAAGCTCCGTCAGTGACTCATCTAAAAAAGCCTTGGCAGACTTCAATCAGATGGTTGAATATTGC AAAGAATCTGGGTGCCGCAGGAGAAAAATTCTCAAGAGCTTTGAGGAAAAGGTATCTGCACTATGTAGCGGAACATGTGA TGCCTGCAAGAATCCATTTTTAGTTGCTAAGAACCTGGAGGAACTTGCTCGTTCTGCTCGTCGAATGACTACCTTCACTT GTAACGTAAGCAGACACTTTTATAACTAG |
Microexon DNA seq | CTTTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAAAATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTT |
Microexon-tag Amino Acid seq | PALAKSGIGLVVSPLIALMENQVMALKGKGIAAEYL |
Transcript ID | XR_003348595.1 |
Gene ID | Ps.69429 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 5.6e-17 |
Motif start | 31 |
Motif end | 194 |
Protein seq | >XR_003348595.1 MEEKKKKIWGKQSLVNLLKEHFGFSEFRGKQFKAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKSGIGLVVSPLIALME NQVMALKGKGIAAEYLSSTQTFAVREKIHKDLNSGKPSLRLLYVTPELIRTRGSKLTNLYSRGLLNLIAIDEAHCISSWG HDFRPSYRNLSSLRNHLPGVPILALTATAVPKVQKDIVESLCLQDPLVLKSSYNRPNIFYEAYHAGLNSEQRSTVLENWL TSKVQVVVATVAFGMGIDKKDVRIVCHFNIPKSMESFYQESGRAGRDQMPSRSLLYYGTDDRRKMGIYSP* |
CDS seq | >XR_003348595.1 ATGGAGGAGAAGAAGAAGAAAATTTGGGGAAAACAAAGTTTAGTAAATCTATTGAAAGAACATTTTGGGTTTTCTGAATT CAGAGGAAAACAATTTAAAGCCATTCAAGCTGTTTTATCAGGAAAAGATTGTTTTTGTTTGATGCCAACAGGAGGGGGAA AGTCCATGTGTTATCAGATACCTGCACTTGCAAAATCAGGAATTGGTCTTGTTGTTTCTCCTCTGATAGCTTTGATGGAA AATCAAGTTATGGCACTGAAGGGAAAAGGAATTGCTGCAGAATATCTTTCGTCGACTCAAACTTTTGCAGTCAGGGAAAA GATTCATAAAGACTTAAACTCTGGAAAGCCGTCGTTAAGGTTGCTATATGTTACACCAGAACTGATAAGGACACGAGGGT CAAAGCTGACAAACCTTTATTCTAGAGGTTTATTGAATTTGATTGCTATAGATGAGGCACATTGCATTTCGTCCTGGGGA CACGATTTCAGGCCTAGCTATCGCAATCTTTCGTCTTTAAGGAACCATCTTCCTGGGGTTCCAATATTGGCCTTGACAGC TACAGCTGTTCCTAAGGTTCAGAAGGATATCGTAGAATCATTATGCTTGCAAGACCCACTAGTCCTCAAATCGTCATACA ACCGTCCTAATATATTTTATGAAGCTTACCATGCTGGATTAAACAGTGAACAGAGAAGCACAGTTTTAGAAAATTGGCTT ACTTCCAAAGTACAAGTGGTTGTGGCTACTGTGGCTTTTGGAATGGGTATTGATAAAAAGGATGTTCGGATAGTTTGTCA TTTCAATATCCCTAAATCGATGGAATCTTTCTATCAAGAATCTGGAAGAGCTGGACGTGATCAGATGCCTTCAAGAAGTT TGTTATACTATGGAACGGATGATCGCAGAAAAATGGGAATTTATTCTCCGTGA |