Microexon ID Ps_NW_020618825.1:17018971-17018978:-
Species Papaver somniferum
Coordinates NW_020618825.1:17018971..17018978
Microexon Cluster ID MEP18
Size 8
Phase 1
Pfam Domain Motif DEAD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CATTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCAGCGCTAGCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC
Microexon-tag Amino Acid Seq PALAKAGIVLVVCPLIALMENQVMALKEKGIRAEYL
Microexon-tag spanning region17018826-17019152
Microexon-tag prediction score0.9678
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Ps_NW_020618825.1:17018971-17018978:- does not have available information here.
Microexon DNA seq CATTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCAGCGCTAGCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC
Microexon-tag Amino Acid seq PALAKAGIVLVVCPLIALMENQVMALKEKGIRAEYL
Transcript ID Ps.69420.2
Gene ID Ps.69420
Gene Name NA
Pfam domain motif DEAD
Motif E-value 2.3e-19
Motif start 46
Motif end 211
Protein seq >Ps.69420.2
MRKFLLPMQNVEKMENSKEKNKSWDKESLVKILKQHFGYSEFRGKQLPAIEAILSGRDCFCLMPTGGGKSMCYQIPALAK
AGIVLVVCPLIALMENQVMALKEKGIRAEYLSSTQTSKVREKIHEDLNSGRPSLRLLYVTPELIATQGFMSKLNKLHSRG
LLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPGVPILALTATAVPKVQKDVMDSLCLQQPLVLRSSFNRPNIYYEVR
YKDLLEDVYADLSNQFKSSGNVCGIIYCLERSACDDLSAHLVKKGLLCRLPCWIKR*
CDS seq >Ps.69420.2
ATGAGGAAATTTCTATTGCCGATGCAAAATGTAGAAAAAATGGAAAATAGTAAGGAGAAGAATAAGTCTTGGGATAAAGA
AAGTTTAGTGAAGATTTTGAAACAACATTTTGGGTATTCTGAATTTAGAGGGAAACAATTACCTGCAATTGAAGCCATTT
TATCAGGAAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGAAAGTCCATGTGTTACCAGATCCCAGCGCTAGCAAAA
GCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCG
TGCAGAATATCTCTCCTCGACTCAAACCTCCAAAGTCAGAGAAAAGATTCATGAAGACCTCAACTCTGGAAGGCCGTCAT
TAAGGCTACTTTATGTAACACCAGAACTGATTGCAACACAGGGGTTTATGTCAAAGCTGAACAAGCTCCACTCAAGAGGC
TTATTGAATCTAATTGCCATAGATGAGGCACATTGCATTTCATCATGGGGACACGATTTCAGGCCCAGCTATCGCAAACT
GTCCTCTCTACGGAATCACCTTCCAGGGGTACCAATATTAGCCTTGACAGCTACAGCTGTTCCTAAGGTCCAGAAAGATG
TGATGGATTCTTTATGCTTGCAACAACCATTAGTCCTCAGATCATCATTTAATCGTCCTAATATATACTACGAAGTTCGG
TATAAAGATCTCCTGGAAGATGTCTACGCTGATTTGTCTAATCAATTCAAGTCTAGTGGAAATGTATGTGGAATCATTTA
CTGCCTTGAGCGTTCAGCTTGTGATGATTTATCGGCTCATTTGGTAAAAAAAGGTCTCTTGTGCCGCTTACCATGCTGGA
TTAAACGATAA