
Microexon ID | Ps_NW_020618825.1:17018971-17018978:- |
Species | Papaver somniferum | Coordinates | NW_020618825.1:17018971..17018978 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CATTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCAGCGCTAGCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC |
Microexon-tag Amino Acid Seq | PALAKAGIVLVVCPLIALMENQVMALKEKGIRAEYL |
Microexon-tag spanning region | 17018826-17019152 |
Microexon-tag prediction score | 0.9678 |
Overlapped with the annotated transcript (%) | NA |
New Transcript ID | NA |
Reference Transcript ID | NA |
Gene ID | NA |
Gene Name | NA |
Ps_NW_020618825.1:17018971-17018978:- does not have available information here.
Microexon DNA seq | CATTGATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCAGCGCTAGCAAAAGCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCGTGCAGAATATCTC |
Microexon-tag Amino Acid seq | PALAKAGIVLVVCPLIALMENQVMALKEKGIRAEYL |
Transcript ID | Ps.69420.2 |
Gene ID | Ps.69420 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 2.3e-19 |
Motif start | 46 |
Motif end | 211 |
Protein seq | >Ps.69420.2 MRKFLLPMQNVEKMENSKEKNKSWDKESLVKILKQHFGYSEFRGKQLPAIEAILSGRDCFCLMPTGGGKSMCYQIPALAK AGIVLVVCPLIALMENQVMALKEKGIRAEYLSSTQTSKVREKIHEDLNSGRPSLRLLYVTPELIATQGFMSKLNKLHSRG LLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPGVPILALTATAVPKVQKDVMDSLCLQQPLVLRSSFNRPNIYYEVR YKDLLEDVYADLSNQFKSSGNVCGIIYCLERSACDDLSAHLVKKGLLCRLPCWIKR* |
CDS seq | >Ps.69420.2 ATGAGGAAATTTCTATTGCCGATGCAAAATGTAGAAAAAATGGAAAATAGTAAGGAGAAGAATAAGTCTTGGGATAAAGA AAGTTTAGTGAAGATTTTGAAACAACATTTTGGGTATTCTGAATTTAGAGGGAAACAATTACCTGCAATTGAAGCCATTT TATCAGGAAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGAAAGTCCATGTGTTACCAGATCCCAGCGCTAGCAAAA GCAGGAATTGTTCTTGTTGTGTGTCCCTTAATAGCATTGATGGAAAACCAAGTCATGGCACTAAAGGAGAAAGGGATTCG TGCAGAATATCTCTCCTCGACTCAAACCTCCAAAGTCAGAGAAAAGATTCATGAAGACCTCAACTCTGGAAGGCCGTCAT TAAGGCTACTTTATGTAACACCAGAACTGATTGCAACACAGGGGTTTATGTCAAAGCTGAACAAGCTCCACTCAAGAGGC TTATTGAATCTAATTGCCATAGATGAGGCACATTGCATTTCATCATGGGGACACGATTTCAGGCCCAGCTATCGCAAACT GTCCTCTCTACGGAATCACCTTCCAGGGGTACCAATATTAGCCTTGACAGCTACAGCTGTTCCTAAGGTCCAGAAAGATG TGATGGATTCTTTATGCTTGCAACAACCATTAGTCCTCAGATCATCATTTAATCGTCCTAATATATACTACGAAGTTCGG TATAAAGATCTCCTGGAAGATGTCTACGCTGATTTGTCTAATCAATTCAAGTCTAGTGGAAATGTATGTGGAATCATTTA CTGCCTTGAGCGTTCAGCTTGTGATGATTTATCGGCTCATTTGGTAAAAAAAGGTCTCTTGTGCCGCTTACCATGCTGGA TTAAACGATAA |