
Microexon ID | Os_2:33092715-33092722:- |
Species | Oryza sativa | Coordinates | 2:33092715..33092722 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CACTAATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCTCTAGTGAAGTCAGGCATTGTTCTTGTTATCTCACCCTTGATAGCACTAATGGAGAATCAGGTTGCCAGCTTGAAAAGCAAAGGTATTCCAGCTGAGTTTCTC |
Microexon-tag Amino Acid Seq | PALVKSGIVLVISPLIALMENQVASLKSKGIPAEFL |
Microexon-tag spanning region | 33092585-33092876 |
Microexon-tag prediction score | 0.9472 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os02t0780800-01x |
Reference Transcript ID | Os02t0780800-01 |
Gene ID | Os02g0780800 |
Gene Name | NA |
Transcript ID | Os02t0780800-01 |
Protein ID | Os02t0780800-01 |
Gene ID | Os02g0780800 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 1.8e-20 |
Motif start | 43 |
Motif end | 208 |
Protein seq | >Os02t0780800-01 MKRQLPIKGASGASGSGHGKKAPQELENVLKQHFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALVKSGI VLVISPLIALMENQVASLKSKGIPAEFLSSTQTSHNKQKIHEDLDSGNPSLKLLYVTPELVATSGFKAKLTKLYNRGLLG LVAIDEAHCISTWGHDFRPSYRKLSSLRNQFPDIPILALTATAVPKVQKDVISSLCLRNPLILRASFNRPNIFYEVRYKD LLDDVYSDISNLLKSSGNVCSIVYCLERAVCDDLTMHLSQQGISSAAYHAGLNSKVRSSVLDDWLSSRTQVVVATVAFGY RY* |
CDS seq | >Os02t0780800-01 ATGAAGAGACAACTTCCCATAAAAGGTGCATCGGGGGCCTCGGGATCTGGGCATGGAAAGAAAGCTCCTCAGGAGCTGGA GAACGTCTTGAAGCAACATTTCGGATATTCAGGCTTTCGAGGAAAGCAACTAGAGGCTATAGAAGCTGTTCTTTCAGGAA GGGATTGCTTTTGTTTGATGCCAACTGGAGGTGGAAAATCAATGTGCTATCAGATTCCTGCTCTAGTGAAGTCAGGCATT GTTCTTGTTATCTCACCCTTGATAGCACTAATGGAGAATCAGGTTGCCAGCTTGAAAAGCAAAGGTATTCCAGCTGAGTT TCTCTCGTCAACACAAACATCGCACAATAAACAAAAGATACATGAAGACCTTGATTCTGGTAATCCTTCTCTAAAATTGC TATATGTTACTCCTGAGTTGGTTGCAACATCTGGGTTCAAGGCAAAGCTAACAAAGCTCTACAATAGAGGTCTCCTTGGT CTTGTTGCTATTGATGAGGCTCATTGCATTTCAACTTGGGGCCATGATTTCAGACCTAGTTACCGCAAGCTTTCATCACT GAGGAACCAGTTCCCAGACATACCTATATTAGCTTTAACTGCAACCGCAGTTCCAAAAGTCCAGAAAGATGTGATATCGT CACTGTGCTTGAGAAATCCATTAATTCTTAGGGCATCATTTAATCGGCCTAATATATTCTATGAAGTTCGCTACAAGGAT CTCCTTGATGACGTTTATTCTGACATATCAAATTTACTGAAGTCCAGTGGAAATGTTTGCTCAATTGTGTACTGTCTTGA ACGTGCGGTTTGTGATGATCTAACTATGCATTTGTCACAGCAGGGTATCTCCTCTGCTGCTTATCATGCTGGCCTAAATA GCAAGGTGCGGAGTTCTGTTCTTGATGATTGGCTTTCCTCGAGAACTCAAGTTGTTGTTGCCACTGTTGCATTTGGGTAT AGGTATTGA |
Microexon DNA seq | CACTAATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCTCTAGTGAAGTCAGGCATTGTTCTTGTTATCTCACCCTTGATAGCACTAATGGAGAATCAGGTTGCCAGCTTGAAAAGCAAAGGTATTCCAGCTGAGTTTCTC |
Microexon-tag Amino Acid seq | PALVKSGIVLVISPLIALMENQVASLKSKGIPAEFL |
Transcript ID | Os.16166.1 |
Gene ID | Os.16166 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 1.1e-19 |
Motif start | 43 |
Motif end | 208 |
Protein seq | >Os.16166.1 MKRQLPIKGASGASGSGHGKKAPQELENVLKQHFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALVKSGI VLVISPLIALMENQVASLKSKGIPAEFLSSTQTSHNKQKIHEDLDSGNPSLKLLYVTPELVATSGFKAKLTKLYNRGLLG LVAIDEAHCISTWGHDFRPSYRKLSSLRNQFPDIPILALTATAVPKVQKDVISSLCLRNPLILRASFNRPNIFYEVRYKD LLDDVYSDISNLLKSSGNVCSIVYCLERAVCDDLTMHLSQQGISSAAYHAGLNSKVRSSVLDDWLSSRTQVVVATVAFGM GIDRQDVRIVCHYNLPKSMEAFYQESGRAGRDQQPSKSVLYYGLDDRKKMEFILRNTKNKKSELSSSSTELSEKALADFS QIIDYCENSTCRRKMIIESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPTCRYNKISPVFKSSLANPKHMETEFWN REDDASISVEDISDSDDGKEVVSNTAISKLPSKAGLDAKFEALERAENAYYQAKGQTKQQGGKLVDKKSISQTLRDASQK RLLNGLGQAKLRLGNLPFDEEPSAAHLEVECFKKYEKVGKTFYNSQIAATVRWLSSSSLDQIQDRLHALADQITDHGAAA SSPSIVPESPPASPDVICKIPGEATSNEAKDIPLKNNTEEFVTTEHSDEIAKVAVLSENMELPKIPSFREFMSQKGRDRA TSSSKVESLPSGVRRKVGIEKQGTTGPSKKMKS* |
CDS seq | >Os.16166.1 ATGAAGAGACAACTTCCCATAAAAGGTGCATCGGGGGCCTCGGGATCTGGGCATGGAAAGAAAGCTCCTCAGGAGCTGGA GAACGTCTTGAAGCAACATTTCGGATATTCAGGCTTTCGAGGAAAGCAACTAGAGGCTATAGAAGCTGTTCTTTCAGGAA GGGATTGCTTTTGTTTGATGCCAACTGGAGGTGGAAAATCAATGTGCTATCAGATTCCTGCTCTAGTGAAGTCAGGCATT GTTCTTGTTATCTCACCCTTGATAGCACTAATGGAGAATCAGGTTGCCAGCTTGAAAAGCAAAGGTATTCCAGCTGAGTT TCTCTCGTCAACACAAACATCGCACAATAAACAAAAGATACATGAAGACCTTGATTCTGGTAATCCTTCTCTAAAATTGC TATATGTTACTCCTGAGTTGGTTGCAACATCTGGGTTCAAGGCAAAGCTAACAAAGCTCTACAATAGAGGTCTCCTTGGT CTTGTTGCTATTGATGAGGCTCATTGCATTTCAACTTGGGGCCATGATTTCAGACCTAGTTACCGCAAGCTTTCATCACT GAGGAACCAGTTCCCAGACATACCTATATTAGCTTTAACTGCAACCGCAGTTCCAAAAGTCCAGAAAGATGTGATATCGT CACTGTGCTTGAGAAATCCATTAATTCTTAGGGCATCATTTAATCGGCCTAATATATTCTATGAAGTTCGCTACAAGGAT CTCCTTGATGACGTTTATTCTGACATATCAAATTTACTGAAGTCCAGTGGAAATGTTTGCTCAATTGTGTACTGTCTTGA ACGTGCGGTTTGTGATGATCTAACTATGCATTTGTCACAGCAGGGTATCTCCTCTGCTGCTTATCATGCTGGCCTAAATA GCAAGGTGCGGAGTTCTGTTCTTGATGATTGGCTTTCCTCGAGAACTCAAGTTGTTGTTGCCACTGTTGCATTTGGAATG GGTATTGATAGACAAGATGTCCGTATTGTGTGTCACTATAACTTGCCTAAGTCCATGGAAGCCTTCTACCAGGAGTCAGG ACGAGCTGGCCGTGACCAACAGCCTTCCAAAAGTGTTCTATATTATGGATTAGATGACCGAAAGAAAATGGAATTTATTT TGAGAAACACCAAGAACAAAAAGTCAGAGTTATCGTCCTCTTCAACTGAACTTTCAGAGAAGGCCTTAGCCGACTTTAGT CAGATAATTGATTACTGCGAAAATTCTACCTGCCGACGAAAAATGATCATTGAGAGCTTTGGGGAGAAGGTACAACCAAC TTTATGCCAACGCTCATGTGATGCTTGCAAACACCCAAATCTAGTGTCCTCACGTTTGGAGGAACTTCGTCGTGTGCCCA CCTGTCGCTATAACAAGATATCCCCAGTCTTCAAAAGCTCGTTGGCTAATCCAAAACACATGGAGACAGAATTTTGGAAT CGTGAAGATGATGCAAGCATATCAGTTGAAGATATATCTGATTCCGATGATGGGAAGGAGGTGGTGAGCAATACTGCCAT TTCAAAGCTCCCATCAAAAGCAGGGCTAGATGCAAAATTTGAAGCATTGGAGCGTGCTGAAAATGCTTATTATCAAGCTA AAGGTCAGACCAAGCAGCAGGGTGGGAAGCTTGTTGACAAGAAGAGCATATCTCAGACACTAAGAGATGCAAGCCAAAAG CGATTGTTGAATGGCCTTGGACAAGCAAAGTTGCGACTTGGGAATCTACCGTTTGATGAAGAGCCTTCTGCAGCACACCT TGAGGTAGAGTGCTTCAAGAAGTACGAGAAAGTGGGCAAGACGTTCTACAACTCGCAGATAGCCGCCACAGTTCGGTGGC TTTCGTCTTCGAGCCTCGACCAGATACAGGACCGCCTCCACGCCCTTGCTGACCAAATCACAGATCATGGTGCTGCGGCA AGCTCCCCTTCCATCGTCCCAGAGTCTCCTCCAGCATCTCCTGATGTAATCTGTAAAATCCCTGGAGAAGCTACTAGCAA CGAAGCTAAGGACATACCTCTGAAGAACAACACGGAGGAGTTTGTAACGACGGAGCATTCTGACGAGATTGCAAAGGTGG CGGTTTTATCTGAAAATATGGAGCTCCCCAAGATACCATCATTCAGAGAATTCATGAGCCAAAAAGGAAGGGATCGTGCA ACGAGTTCTTCCAAAGTAGAGAGCCTGCCTTCCGGTGTTCGTAGAAAGGTTGGCATTGAGAAGCAAGGGACGACGGGACC ATCCAAGAAGATGAAATCATGA |