| Microexon ID | Hv_6H:528506272-528506279:- |
| Species | Hordeum Vulgare | Coordinates | 6H:528506272..528506279 |
| Microexon Cluster ID | MEP18 |
| Size | 8 |
| Phase | 1 |
| Pfam Domain Motif | DEAD |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | CGCTAATG |
| Microexon Amino Acid seq | ALM |
| Microexon-tag DNA Seq | CCTGCTCTAGTGAAGACAGGCGTTGTTCTTGTTATCTCACCCTTGATAGCGCTAATGGAGAATCAGGTTAGCAGCTTGAAAAGTAAAGGAATTCCAGCTGAATTTCTC |
| Microexon-tag Amino Acid Seq | PALVKTGVVLVISPLIALMENQVSSLKSKGIPAEFL |
| Microexon-tag spanning region | 528506127-528506453 |
| Microexon-tag prediction score | 0.9497 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | HORVU.MOREX.r3.6HG0620770.1x |
| Reference Transcript ID | HORVU.MOREX.r3.6HG0620770.1 |
| Gene ID | HORVU.MOREX.r3.6HG0620770 |
| Gene Name | NA |
| Transcript ID | HORVU.MOREX.r3.6HG0620770.1 |
| Protein ID | |
| Gene ID | HORVU.MOREX.r3.6HG0620770 |
| Gene Name | |
| Pfam domain motif | DEAD |
| Motif E-value | 1.10E-26 |
| Motif start | 41 |
| Motif end | 205 |
| Protein seq | >HORVU.MOREX.r3.6HG0620770.1 MKKALPLKGGSAGSRHGTKSPKELESVLKQYFGYSEFRGRQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALVKTGVVL VISPLIALMENQVSSLKSKGIPAEFLSSTQTTANKNKIHEDLDSGRPSLKLLYVTPELVATSGFKAKLTKLHNRGLLGLV AIDEAHCISTWGHDFRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVISSLSLQNPVILKASFNRPNIFYEVRYKDLL DDVYSDISNLLKSSGNVCSIIYCLERAACDDLTMHLSQQGISSAAYHAGLNSKVRTTVLDDWLSSRTQVVVATVAFGMGI DRQDVRIVCHFNLPKSMESFYQESGRAGRDQQPSRSVLYYGLEDRRRMEFILRNSSSRKQQPPSSSTELSEKTLADFSQI VDYCESSTCRRKKIIESFGEKVQPTLCQRTCDACKHPNQVASRLEDLRRVPNSRFNKISPVFKTSSVDPKHFDTEFWNRE DDVSRSDEDISDSDDEEEALSNVAISKLPSKGGFEARLEALERAENAYNQAKGQTKPQGGNLVDKKSISQALRDASRKRL SGALGQAKLRLEDLRFAEEASAAHLETECFKKYQKVGKTFYNSQIAATVRWLSSSSSEQIHDRLEALTNQSTDHGAAAGS SPCIIPDALGEAEKPAVATVSHKFAETEPSDEFAKTVVSTEHMEPSKMSPPEKSIGEEGRRDRTIGTMDLPKIPSFREFM SQKGRDRATSSSRAESQPRGVPRKAGPVISKEGGTGTSKKMKL* |
| CDS seq | >HORVU.MOREX.r3.6HG0620770.1 ATGAAGAAGGCGCTTCCCCTGAAAGGCGGGTCGGCAGGCTCTAGGCATGGAACGAAATCTCCCAAGGAGCTGGAGAGCGT CTTGAAGCAGTATTTTGGGTACTCGGAGTTCCGAGGAAGGCAGCTGGAGGCCATAGAGGCTGTTCTTTCAGGAAGGGATT GCTTCTGTTTGATGCCAACTGGAGGTGGCAAGTCAATGTGCTACCAAATCCCTGCTCTAGTGAAGACAGGCGTTGTTCTT GTTATCTCACCCTTGATAGCGCTAATGGAGAATCAGGTTAGCAGCTTGAAAAGTAAAGGAATTCCAGCTGAATTTCTCTC TTCGACACAGACAACAGCTAACAAAAACAAGATACATGAAGATCTCGATTCTGGCCGTCCTTCTTTGAAATTGTTGTATG TCACTCCTGAGTTAGTTGCAACATCTGGCTTCAAGGCAAAGTTAACAAAGCTCCACAACAGGGGTCTTCTTGGTCTTGTT GCTATTGATGAGGCTCATTGTATATCAACTTGGGGCCATGATTTCAGACCTAGCTACCGCAAGATTTCATCATTGAGGAA GCAGTTCCCCGATATCCCAATATTGGCTTTGACTGCAACTGCTGTCCCAAAAGTCCAGAAAGATGTGATATCATCATTGT CCTTGCAAAACCCAGTCATTCTTAAAGCTTCCTTTAATCGACCTAATATCTTCTATGAAGTTCGTTACAAGGATCTTCTT GATGACGTTTATTCTGATATATCGAATTTACTGAAGTCCAGCGGGAATGTTTGCTCAATCATATATTGCCTTGAACGTGC TGCCTGTGATGATCTGACTATGCATTTGTCGCAGCAGGGCATCTCTTCTGCTGCTTATCATGCTGGCCTGAATAGTAAAG TACGAACTACCGTTCTTGATGACTGGCTTTCATCAAGGACTCAAGTTGTTGTTGCAACTGTAGCATTTGGAATGGGTATT GATAGACAAGATGTCCGCATTGTGTGCCATTTCAACTTGCCTAAGTCAATGGAATCTTTCTACCAGGAGTCCGGACGCGC TGGTCGTGACCAACAGCCTTCCAGGAGTGTTTTGTATTATGGGTTGGAGGACCGAAGGAGAATGGAATTTATTTTGAGAA ACAGCAGCAGTAGAAAACAACAGCCACCTTCTTCTTCAACTGAGCTTTCAGAGAAGACCCTAGCCGACTTTAGTCAGATA GTTGATTATTGTGAGAGTTCTACCTGCCGACGAAAAAAGATTATTGAGAGTTTTGGAGAAAAGGTACAACCAACTTTATG CCAACGCACATGCGATGCTTGCAAGCACCCAAATCAAGTGGCCTCACGTTTGGAGGACCTTCGGCGTGTGCCCAACTCTC GCTTTAACAAGATATCTCCAGTCTTCAAAACCTCATCAGTTGACCCAAAACACTTTGACACGGAATTTTGGAACCGTGAA GATGACGTAAGCAGATCAGACGAAGATATATCAGATTCTGATGATGAGGAAGAGGCCCTGAGCAATGTCGCCATTTCAAA GCTTCCATCAAAAGGAGGGTTCGAAGCAAGACTTGAGGCCTTGGAACGTGCTGAAAATGCTTACAATCAAGCCAAAGGTC AAACTAAACCGCAGGGTGGCAACCTTGTTGACAAGAAGAGCATATCTCAGGCTCTAAGAGATGCAAGCAGGAAAAGATTG TCGGGTGCGCTTGGACAAGCAAAGCTCCGTCTTGAGGATCTGCGGTTTGCCGAAGAGGCTTCTGCCGCGCACCTTGAAAC AGAGTGCTTCAAGAAGTATCAGAAAGTGGGGAAGACGTTCTATAACTCTCAGATAGCAGCCACGGTTCGGTGGCTGTCGT CTTCAAGTTCTGAACAAATCCATGACCGCCTTGAAGCCCTTACCAATCAGAGTACAGACCATGGTGCAGCAGCCGGCAGC TCCCCTTGCATCATTCCTGATGCCCTGGGTGAAGCAGAAAAGCCAGCAGTTGCCACTGTAAGCCACAAGTTCGCAGAAAC AGAGCCTTCTGATGAGTTCGCGAAGACCGTGGTTTCAACTGAACACATGGAGCCTTCCAAGATGTCACCACCCGAGAAAT CCATAGGCGAAGAAGGGAGAAGAGATCGCACGATCGGTACCATGGACCTTCCCAAGATACCATCGTTCAGAGAATTCATG AGCCAGAAGGGAAGGGATCGCGCAACCAGCTCTTCCAGGGCAGAGAGCCAGCCTCGCGGCGTTCCTAGAAAGGCTGGTCC TGTGATCAGCAAAGAAGGAGGGACAGGAACATCAAAGAAAATGAAACTATGA |
Hv_6H:528506272-528506279:- does not have available information here.