
Microexon ID | Gm_9:7211644-7211651:- |
Species | Glycine max | Coordinates | 9:7211644..7211651 |
Microexon Cluster ID | MEP18 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | DEAD |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | CCTTAATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCATTGGCAAAAGCAGGCATTGTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATTTCTC |
Microexon-tag Amino Acid Seq | PALAKAGIVLVVCPLIALMENQVMALKEKGIAAEFL |
Microexon-tag spanning region | 7211486-7211820 |
Microexon-tag prediction score | 0.9639 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KRH37506x |
Reference Transcript ID | KRH37506 |
Gene ID | GLYMA_09G070600 |
Gene Name | NA |
Transcript ID | KRH37506 |
Protein ID | KRH37506 |
Gene ID | GLYMA_09G070600 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 4.4e-19 |
Motif start | 41 |
Motif end | 208 |
Protein seq | >KRH37506 MQKSALPLSDANANKKREELRRKETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGI VLVVCPLIALMENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLN LIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKD LLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGL WSSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKM SLIAFNLMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAIN GEQLSEFWNQDEEASGSEEDISDSDGNGNEVVNNLTRSKLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISD PMRGSSRQRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAINAS TSMNVLSEAENLLIPANQPLTPAEQPLTSPPALDPYARDTSNEHSGTARSETSACVLPMEGSFSTNLPQIPSFSEFVNSR KAKGDQLHDTKRHSSRVEKKMRIQ* |
CDS seq | >KRH37506 ATGCAGAAGTCGGCATTGCCACTGAGCGACGCGAATGCGAACAAGAAGAGGGAGGAATTGCGCCGCAAGGAAACGTTGGT GAAGCTTCTGAGATGGCATTTTGGGTACCCCGATTTCAGGGACATGCAATTGGACGCTATTCAAGCTGTGCTCTCAGGGA AAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGCATT GTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATT TCTCTCCTCAACGAAAACAACAGATGCAAAAGTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTACGAGGCTGC TATATGTGACTCCAGAGTTGATAACAACACCAGGGTTTATGACTAAGCTGACAAAGATTTATACCAGGGGGTTGCTAAAT CTGATTGCGATAGATGAGGCGCATTGCATCTCATCTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTATCCTCTTT GAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGTGCCTAAGGTTCAGAAGGATGTAGTTGAAT CCTTGCAGATGCAAAATCCATTAATGCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGAT CTGTTGGATGATGCTTATGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGA ACGTTCAATGTGTGATGACTTGTCAACTAATCTATCCCAAAATGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATA ATAAAATGCGAACTTCGGTGTTGGATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGCCTT TGGTCTTCTTTCAGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAGTCAATGGAAGC ATTCTATCAAGAGTCAGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGCTGTACTATGGGGTAGATGATCGCA AAAGAATGGAATTTATATTACGTAAATCAGTGAGCAAGAAGTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATG TCCCTGATTGCTTTCAATCTGATGGTTGAATATTGTGAAGGGTCTGGATGTCGCAGGAAAAGGGTTCTCGAGAGTTTTGG GGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGGCTGCAGACATCCAAACTTAGTTGCCCGATATTTGGAGG ATCTCACAACTGCTTGTGCTCTACGCCAGAAAAATGGTTCTTCTCGAGTTTTTATGACCAGTTCCACTGATGCAATTAAC GGAGAACAGTTATCTGAATTCTGGAATCAGGATGAGGAAGCTAGTGGATCAGAGGAAGATATATCTGATTCAGATGGTAA TGGTAATGAGGTTGTCAACAACCTAACCCGGTCAAAGCTTCAATCCAAATTGGGAGTGAGTGAAAAGCTTGCTATGTTAC AACGGGCAGAAGAAAACTTCTATCGAAATAATAATGCTTACAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGAT CCAATGCGAGGATCAAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGA AATGGAAACATCAGCATCTTTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGTAAATCATTCTATTATTCGC AAGTGGCAAGTACTGTAAGATGGCTGACAACTGCAAGTTCTAGCGAACTGATCAACCGACTTAGTGCAATTAATGCTTCT ACCTCAATGAATGTCTTGTCTGAAGCTGAAAACCTCCTCATCCCAGCTAATCAGCCCCTCACACCAGCTGAACAGCCCCT CACATCGCCACCTGCTTTAGATCCTTATGCAAGAGATACCAGCAATGAACACTCAGGCACTGCTAGATCAGAAACTTCTG CATGTGTCTTGCCAATGGAAGGTTCTTTTAGTACCAATTTGCCACAGATACCATCCTTCTCTGAATTCGTAAATAGTAGG AAAGCAAAAGGGGACCAATTACATGACACCAAAAGGCATTCATCAAGAGTTGAAAAGAAGATGAGGATACAGTAG |
Microexon DNA seq | CCTTAATG |
Microexon Amino Acid seq | ALM |
Microexon-tag DNA Seq | CCTGCATTGGCAAAAGCAGGCATTGTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATTTCTC |
Microexon-tag Amino Acid seq | PALAKAGIVLVVCPLIALMENQVMALKEKGIAAEFL |
Transcript ID | Gm.52479.1 |
Gene ID | Gm.52479 |
Gene Name | NA |
Pfam domain motif | DEAD |
Motif E-value | 4.4e-19 |
Motif start | 41 |
Motif end | 208 |
Protein seq | >Gm.52479.1 MQKSALPLSDANANKKREELRRKETLVKLLRWHFGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGI VLVVCPLIALMENQVMALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLN LIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYEVRYKD LLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGL WSSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKM SLIAFNLMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAIN GEQLSEFWNQDEEASGSEEDISDSDGNGNEVVNNLTRSKLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISD PMRGSSRQRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAINAS TSMNVLSEAENLLIPANQPLTPAEQPLTSPPALDPYARDTSNEHSGTARSETSACVLPMEGSFSTNLPQIPSFSEFVNSR KAKGDQLHDTKRHSSRVEKKMRIQ* |
CDS seq | >Gm.52479.1 ATGCAGAAGTCGGCATTGCCACTGAGCGACGCGAATGCGAACAAGAAGAGGGAGGAATTGCGCCGCAAGGAAACGTTGGT GAAGCTTCTGAGATGGCATTTTGGGTACCCCGATTTCAGGGACATGCAATTGGACGCTATTCAAGCTGTGCTCTCAGGGA AAGATTGTTTTTGTCTTATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGCAGGCATT GTGCTTGTCGTTTGCCCTTTAATAGCCTTAATGGAAAACCAAGTAATGGCACTAAAGGAGAAAGGCATAGCGGCAGAATT TCTCTCCTCAACGAAAACAACAGATGCAAAAGTAAAGATTCATGAGGACCTTGATTCTGGAAAACCTTCTACGAGGCTGC TATATGTGACTCCAGAGTTGATAACAACACCAGGGTTTATGACTAAGCTGACAAAGATTTATACCAGGGGGTTGCTAAAT CTGATTGCGATAGATGAGGCGCATTGCATCTCATCTTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTATCCTCTTT GAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGTGCCTAAGGTTCAGAAGGATGTAGTTGAAT CCTTGCAGATGCAAAATCCATTAATGCTCAAGTCTTCATTTAATCGTCCTAATATATATTATGAAGTTAGATACAAAGAT CTGTTGGATGATGCTTATGCTGATTTATCTAATACACTCAAATCTCTGGGAGATGTCTGTGCAATAGTGTACTGCCTTGA ACGTTCAATGTGTGATGACTTGTCAACTAATCTATCCCAAAATGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATA ATAAAATGCGAACTTCGGTGTTGGATGATTGGATATCTTCCAAGATAAAAGTTGTTGTTGCTACTGTTGCTTTTGGCCTT TGGTCTTCTTTCAGAATGGGCATTGATAGAAAGGATGTCAGAATTGTATGCCACTTCAACATTCCCAAGTCAATGGAAGC ATTCTATCAAGAGTCAGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGCTGTACTATGGGGTAGATGATCGCA AAAGAATGGAATTTATATTACGTAAATCAGTGAGCAAGAAGTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATG TCCCTGATTGCTTTCAATCTGATGGTTGAATATTGTGAAGGGTCTGGATGTCGCAGGAAAAGGGTTCTCGAGAGTTTTGG GGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGGCTGCAGACATCCAAACTTAGTTGCCCGATATTTGGAGG ATCTCACAACTGCTTGTGCTCTACGCCAGAAAAATGGTTCTTCTCGAGTTTTTATGACCAGTTCCACTGATGCAATTAAC GGAGAACAGTTATCTGAATTCTGGAATCAGGATGAGGAAGCTAGTGGATCAGAGGAAGATATATCTGATTCAGATGGTAA TGGTAATGAGGTTGTCAACAACCTAACCCGGTCAAAGCTTCAATCCAAATTGGGAGTGAGTGAAAAGCTTGCTATGTTAC AACGGGCAGAAGAAAACTTCTATCGAAATAATAATGCTTACAAACAGAGCAACAAAGTTGACAAAAATGCTATTTCTGAT CCAATGCGAGGATCAAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGA AATGGAAACATCAGCATCTTTCCTTGAAGAAGAATGCTACAAGAAATATGGCAAGGTTGGTAAATCATTCTATTATTCGC AAGTGGCAAGTACTGTAAGATGGCTGACAACTGCAAGTTCTAGCGAACTGATCAACCGACTTAGTGCAATTAATGCTTCT ACCTCAATGAATGTCTTGTCTGAAGCTGAAAACCTCCTCATCCCAGCTAATCAGCCCCTCACACCAGCTGAACAGCCCCT CACATCGCCACCTGCTTTAGATCCTTATGCAAGAGATACCAGCAATGAACACTCAGGCACTGCTAGATCAGAAACTTCTG CATGTGTCTTGCCAATGGAAGGTTCTTTTAGTACCAATTTGCCACAGATACCATCCTTCTCTGAATTCGTAAATAGTAGG AAAGCAAAAGGGGACCAATTACATGACACCAAAAGGCATTCATCAAGAGTTGAAAAGAAGATGAGGATACAGTAG |