| Microexon ID | Bn_scaffoldA08:21335094-21335101:- |
| Species | Brassica Napus | Coordinates | scaffoldA08:21335094..21335101 |
| Microexon Cluster ID | MEP18 |
| Size | 8 |
| Phase | 1 |
| Pfam Domain Motif | DEAD |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | CTTTGATG |
| Microexon Amino Acid seq | ALM |
| Microexon-tag DNA Seq | CCTGCGTTGGCTAAACCTGGAATCGTGCTTGTTGTTTCTCCTTTGATTGCTTTGATGGAGAACCAAGTGATGGCGTTGAAGGAGAAAGGTATTGCTGCTGAGTATCTC |
| Microexon-tag Amino Acid Seq | PALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYL |
| Microexon-tag spanning region | 21334970-21335252 |
| Microexon-tag prediction score | 0.9682 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaA08T0178400ZSx |
| Reference Transcript ID | BnaA08T0178400ZS |
| Gene ID | BnaA08G0178400ZS |
| Gene Name | NA |
| Transcript ID | BnaA08T0178400ZS |
| Protein ID | |
| Gene ID | BnaA08G0178400ZS |
| Gene Name | |
| Pfam domain motif | DEAD |
| Motif E-value | 1.50E-25 |
| Motif start | 41 |
| Motif end | 206 |
| Protein seq | >BnaA08T0178400ZS MKKSPLPVQNVNRSDKNVAGKEALVKLLRWHFGHGDFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVL VVSPLIALMENQVMALKEKGIAAEYLSSTQATHVRNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHDRGLLNLI AIDEAHCISSWGHDFRPSYRQLSTLRDSLTDVPVLALTATAAPKVQKDVIDSLSLRNPLVLKSSFNRPNIFYEVRYKDLI DNAYTDLCNMLKSCGKICAIIYCLERTTCDDLSLHLTSTGISSAAYHAGLNSHLRSTVLDDWLSSKKQVIVATVAFGMGI DKKDVRMVCHFNVPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEFLLRNSENKKSPSSSSKKPTSDFEQIVRYCE GSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVARSLEELTTTASRRHNSSRVFITSSSDNKTNEGQYSEFWNRNEDG SNSDEEISDSDDGADVVKSLAGPKLSRKLGVDEKLVLLERAEEKYNESNKQVKKSEKNAISETLRESSKQRLLNELTKVL QLLGVKEIDSQNASEFLESECYRKYSKAGKSFYYSQIASTVRWLGTASRDELMTRLSSMAREEEPSGEPILVTEPSQNIE QEDGTTYTAEPHVDETTQQLVISPSCSPIRLPEIPSFSEFVNRRKMKHSTEGSDGKKPSKIMKLK* |
| CDS seq | >BnaA08T0178400ZS ATGAAGAAATCGCCGTTGCCGGTGCAGAACGTTAACCGCTCCGATAAGAACGTCGCCGGAAAAGAAGCACTGGTGAAGCT ATTGCGATGGCACTTCGGCCATGGAGATTTCAGAGGGAAGCAGCTAGAGGCGATTCAAGCGGTTGTATCAGGAAGGGATT GCTTTTGCTTGATGCCGACGGGAGGAGGGAAATCGATTTGTTATCAGATACCTGCGTTGGCTAAACCTGGAATCGTGCTT GTTGTTTCTCCTTTGATTGCTTTGATGGAGAACCAAGTGATGGCGTTGAAGGAGAAAGGTATTGCTGCTGAGTATCTCTC GTCCACTCAAGCTACACATGTTAGGAACAAGATCCACGAGGACCTTGATTCTGGAAAACCTTCTGTAAGATTGCTGTATG TAACTCCAGAACTGATCGCGACAAAAGGATTTATGCTGAAGCTGAGAAAGCTCCATGACAGGGGTTTACTGAATCTTATA GCCATAGACGAGGCACATTGCATCTCATCATGGGGCCATGACTTCAGACCTAGCTATCGTCAACTTTCAACCTTAAGAGA TTCTTTGACTGATGTTCCAGTGTTGGCTCTAACCGCTACTGCTGCTCCTAAGGTACAAAAGGATGTCATTGACTCCTTGA GTTTGCGGAATCCTTTGGTCCTCAAGTCCTCTTTCAATCGCCCAAATATCTTCTATGAAGTTAGGTACAAAGACCTTATA GACAATGCTTATACTGATTTGTGCAACATGCTCAAGTCATGTGGAAAAATATGTGCAATTATCTATTGCCTTGAGCGTAC AACCTGTGATGACTTGTCTCTTCATCTCACCAGTACTGGGATCTCTTCTGCTGCTTATCATGCAGGACTCAATAGTCATC TGAGAAGTACTGTTTTAGATGACTGGCTGTCCTCGAAGAAGCAAGTTATTGTTGCCACAGTGGCTTTCGGAATGGGTATA GATAAGAAGGATGTGAGAATGGTTTGCCACTTTAACGTCCCAAAATCGATGGAATCTTTCTACCAAGAGTCCGGTAGAGC AGGTCGGGATCAGCTACCTTCAAGAAGTGTATTATACTATGGCGTAGACGATAGAAAGAAAATGGAGTTTCTACTACGGA ACTCGGAGAATAAGAAATCCCCATCCTCATCCTCAAAGAAGCCTACATCTGACTTCGAGCAGATTGTGAGATACTGCGAA GGTTCTGGATGCCGAAGGAAAAAGATTCTTGAGAGCTTTGGTGAAGAGTTTCCTGTACAGCAATGCAAGAAAACGTGTGA TGCATGTAAGCATCCAAATCAAGTTGCTCGTAGCTTGGAGGAGCTCACGACTACCGCCTCCCGAAGACACAACTCTTCTC GAGTTTTCATCACCAGCTCGAGTGATAATAAGACCAATGAAGGGCAGTACTCTGAGTTCTGGAATCGTAATGAAGATGGA AGCAATTCCGACGAGGAAATATCAGATTCAGATGATGGAGCTGATGTTGTCAAAAGCCTAGCAGGACCTAAACTATCGAG GAAGCTGGGAGTAGATGAGAAACTGGTTTTACTGGAGCGGGCTGAGGAAAAGTACAACGAAAGCAATAAACAGGTCAAAA AGTCAGAGAAGAATGCGATATCTGAAACACTAAGGGAATCAAGCAAGCAGAGACTCTTGAATGAGCTTACAAAAGTACTT CAACTGCTTGGTGTAAAAGAGATTGATTCCCAAAACGCATCTGAGTTTCTTGAAAGCGAGTGCTATAGAAAATACAGCAA AGCAGGGAAATCGTTTTACTACTCACAGATAGCGAGTACTGTGAGATGGTTAGGAACCGCAAGCAGAGACGAGCTAATGA CCCGACTTAGCTCAATGGCCAGAGAAGAAGAGCCATCAGGAGAACCAATCCTGGTGACTGAACCATCACAGAACATAGAG CAAGAAGATGGAACCACATACACAGCCGAGCCACATGTCGACGAAACAACACAGCAGCTAGTGATTAGCCCGAGCTGTTC GCCTATAAGGCTCCCAGAGATTCCGTCATTCTCAGAGTTTGTGAACCGTAGAAAGATGAAGCACTCTACCGAAGGTTCTG ATGGCAAGAAACCGTCAAAGATAATGAAGCTAAAGTAA |
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