Microexon ID At_4:16936676-16936683:+
Species Arabidopsis thaliana
Coordinates 4:16936676..16936683
Microexon Cluster ID MEP18
Size 8
Phase 1
Pfam Domain Motif DEAD
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CCTGCWCTRGCAAARMCAGGMATTGTKCTTGTTGTTTSTCCYTTRATAGCHYTRATGGARAAYCARGTTAYGRSMTTGAARGARAAAGGRRTTSCWGCTGAATWTCTC
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq CTTTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCTGCATTAGCTAAACCTGGAATCGTCCTTGTTGTGTCTCCTTTGATTGCTTTGATGGAAAATCAAGTAATGGCGCTGAAGGAGAAAGGTATTGCTGCTGAGTATCTC
Microexon-tag Amino Acid Seq PALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYL
Microexon-tag spanning region16936527-16936826
Microexon-tag prediction score0.9584
Overlapped with the annotated transcript (%) 100
New Transcript ID AT4G35740.1x
Reference Transcript ID AT4G35740.1
Gene ID AT4G35740
Gene Name RECQL3
Transcript ID AT4G35740.1
Protein ID AT4G35740.1
Gene ID AT4G35740
Gene Name RECQL3
Pfam domain motif DEAD
Motif E-value 2e-19
Motif start 41
Motif end 207
Protein seq >AT4G35740.1
MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVL
VVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLI
AIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLL
DNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGI
DKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVTYCEGS
GCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNS
NEEISDSDDATEAANSVTGPKLSKKLGLDEKLVLLEQAEEKYYERNKQVKKSEKNAISEALRDSSKQRLLDALTRVLQLL
ACVEEIDSQKGSEFLENECYRKYSKAGKSFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATEPVENI
EEEDDGKTNTVESRVDEPTQELVVSPILSPIRLPQVPSFSEFVNRRKIKQNTLIDKSSEGFDDKKPAKIMKLQ*
CDS seq >AT4G35740.1
ATGAAGAAATCGCCGTTGCCGGTGCAGAATGTGCAGAGCTCCGATAAGAACGTTGCCGGAAAAGAAGCATTGGTGAAGCT
TTTGAGATGGCATTTCGGTCATGCAGATTTCAGAGGGAAGCAATTGGAGGCTATTCAAGCTGTTGTATCTGGAAGGGATT
GCTTTTGCTTGATGCCAACGGGAGGAGGAAAATCGATTTGTTATCAGATACCTGCATTAGCTAAACCTGGAATCGTCCTT
GTTGTGTCTCCTTTGATTGCTTTGATGGAAAATCAAGTAATGGCGCTGAAGGAGAAAGGTATTGCTGCTGAGTATCTCTC
ATCTACCCAAGCTACACATGTTAAGAACAAGATCCATGAAGACCTTGATTCTGGAAAACCCTCAGTAAGATTGCTGTATG
TTACTCCAGAATTGATTGCGACGAAAGGGTTTATGTTGAAGCTGAGAAAACTCCATTCCAGGGGTTTGCTAAATCTTATA
GCTATAGACGAGGCGCATTGCATCTCATCATGGGGCCACGACTTCAGACCTAGTTATCGTCAACTTTCAACCTTGAGAGA
TTCTTTGGCAGATGTTCCGGTGTTGGCTCTAACTGCTACTGCTGCTCCCAAAGTACAAAAGGATGTTATCGACTCCTTGA
ATTTGCGGAATCCTTTGGTCCTCAAGTCTTCTTTCAATCGCCCAAATATCTTCTATGAAGTTCGTTACAAAGATCTTTTG
GATAATGCTTATACTGATTTGGGCAACTTGCTCAAGTCATGTGGAAATATTTGTGCAATTATCTATTGCCTTGAGCGTAC
AACCTGTGATGACTTGTCTGTTCATCTTTCCAGTATTGGGATTTCTTCTGCGGCCTATCATGCAGGACTCAATAGTAAAA
TGAGGAGTACTGTTTTAGATGATTGGCTGTCCTCCAAGAAGCAAATTATTGTTGCCACAGTGGCTTTCGGAATGGGCATA
GATAAGAAGGATGTCAGAATGGTTTGCCATTTTAACATTCCAAAATCAATGGAATCTTTCTATCAAGAGTCTGGTAGAGC
AGGTCGGGATCAATTACCTTCAAGAAGTGTATTATACTATGGTGTAGATGACAGAAAGAAAATGGAATATCTTCTGCGGA
ATTCGGAGAATAAGAAATCCTCATCCTCTAAGAAGCCTACATCTGACTTTGAACAGATTGTGACGTACTGCGAAGGTTCT
GGATGCCGAAGAAAAAAGATTCTTGAGAGCTTTGGTGAAGAGTTTCCTGTGCAGCAATGCAAAAAAACGTGTGATGCATG
TAAGCATCCTAATCAAGTTGCTCATTGCTTGGAGGAGCTTATGACCACTGCCTCCCGAAGACACAATTCTTCTCGAATTT
TCATCACCAGCTCGAACAATAAGACCAATGAGGGACAGTACTCTGAGTTCTGGAATCGTAATGAAGATGGAAGCAATTCC
AATGAGGAAATATCAGATTCAGATGATGCCACTGAGGCTGCCAATAGCGTAACAGGACCTAAACTATCGAAAAAGTTGGG
ACTAGACGAGAAATTGGTTTTACTGGAGCAAGCTGAGGAAAAGTACTACGAAAGGAATAAACAGGTCAAAAAGTCAGAGA
AGAATGCAATATCTGAAGCCCTAAGGGATTCGAGCAAGCAGAGACTCTTGGATGCGTTGACACGAGTACTTCAGCTGCTT
GCCTGTGTGGAGGAGATTGATTCCCAGAAAGGATCCGAGTTTCTTGAAAATGAGTGCTATCGAAAATATAGCAAAGCAGG
GAAATCGTTTTACTACTCGCAGATAGCGAGTACTGTGAGATGGCTAGGAACCGCAAGCAGAGATGAGCTAATGACCCGAC
TTAGCTCAGTGGTCAGTTTGGCTAGAGAGCAAGAGCCATTAGAAGAGCCGTTGCTGGCTACTGAACCGGTGGAGAACATA
GAGGAAGAAGATGATGGTAAGACTAACACGGTCGAGTCAAGGGTTGATGAACCGACACAAGAGCTAGTGGTGAGTCCGAT
CCTTTCGCCTATAAGGCTTCCACAAGTTCCATCATTCTCAGAGTTTGTTAACCGGAGAAAAATAAAACAAAACACATTGA
TAGATAAATCTTCTGAAGGTTTTGATGACAAGAAACCGGCAAAGATAATGAAGCTTCAATAA
Microexon DNA seq CTTTGATG
Microexon Amino Acid seq ALM
Microexon-tag DNA Seq CCTGCATTAGCTAAACCTGGAATCGTCCTTGTTGTGTCTCCTTTGATTGCTTTGATGGAAAATCAAGTAATGGCGCTGAAGGAGAAAGGTATTGCTGCTGAGTATCTC
Microexon-tag Amino Acid seq PALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYL
Transcript ID AT4G35740.1
Gene ID At.21155
Gene Name RECQL3
Pfam domain motif DEAD
Motif E-value 2e-19
Motif start 41
Motif end 207
Protein seq >AT4G35740.1
MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVL
VVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLI
AIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLL
DNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGI
DKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVTYCEGS
GCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNS
NEEISDSDDATEAANSVTGPKLSKKLGLDEKLVLLEQAEEKYYERNKQVKKSEKNAISEALRDSSKQRLLDALTRVLQLL
ACVEEIDSQKGSEFLENECYRKYSKAGKSFYYSQIASTVRWLGTASRDELMTRLSSVVSLAREQEPLEEPLLATEPVENI
EEEDDGKTNTVESRVDEPTQELVVSPILSPIRLPQVPSFSEFVNRRKIKQNTLIDKSSEGFDDKKPAKIMKLQ*
CDS seq >AT4G35740.1
ATGAAGAAATCGCCGTTGCCGGTGCAGAATGTGCAGAGCTCCGATAAGAACGTTGCCGGAAAAGAAGCATTGGTGAAGCT
TTTGAGATGGCATTTCGGTCATGCAGATTTCAGAGGGAAGCAATTGGAGGCTATTCAAGCTGTTGTATCTGGAAGGGATT
GCTTTTGCTTGATGCCAACGGGAGGAGGAAAATCGATTTGTTATCAGATACCTGCATTAGCTAAACCTGGAATCGTCCTT
GTTGTGTCTCCTTTGATTGCTTTGATGGAAAATCAAGTAATGGCGCTGAAGGAGAAAGGTATTGCTGCTGAGTATCTCTC
ATCTACCCAAGCTACACATGTTAAGAACAAGATCCATGAAGACCTTGATTCTGGAAAACCCTCAGTAAGATTGCTGTATG
TTACTCCAGAATTGATTGCGACGAAAGGGTTTATGTTGAAGCTGAGAAAACTCCATTCCAGGGGTTTGCTAAATCTTATA
GCTATAGACGAGGCGCATTGCATCTCATCATGGGGCCACGACTTCAGACCTAGTTATCGTCAACTTTCAACCTTGAGAGA
TTCTTTGGCAGATGTTCCGGTGTTGGCTCTAACTGCTACTGCTGCTCCCAAAGTACAAAAGGATGTTATCGACTCCTTGA
ATTTGCGGAATCCTTTGGTCCTCAAGTCTTCTTTCAATCGCCCAAATATCTTCTATGAAGTTCGTTACAAAGATCTTTTG
GATAATGCTTATACTGATTTGGGCAACTTGCTCAAGTCATGTGGAAATATTTGTGCAATTATCTATTGCCTTGAGCGTAC
AACCTGTGATGACTTGTCTGTTCATCTTTCCAGTATTGGGATTTCTTCTGCGGCCTATCATGCAGGACTCAATAGTAAAA
TGAGGAGTACTGTTTTAGATGATTGGCTGTCCTCCAAGAAGCAAATTATTGTTGCCACAGTGGCTTTCGGAATGGGCATA
GATAAGAAGGATGTCAGAATGGTTTGCCATTTTAACATTCCAAAATCAATGGAATCTTTCTATCAAGAGTCTGGTAGAGC
AGGTCGGGATCAATTACCTTCAAGAAGTGTATTATACTATGGTGTAGATGACAGAAAGAAAATGGAATATCTTCTGCGGA
ATTCGGAGAATAAGAAATCCTCATCCTCTAAGAAGCCTACATCTGACTTTGAACAGATTGTGACGTACTGCGAAGGTTCT
GGATGCCGAAGAAAAAAGATTCTTGAGAGCTTTGGTGAAGAGTTTCCTGTGCAGCAATGCAAAAAAACGTGTGATGCATG
TAAGCATCCTAATCAAGTTGCTCATTGCTTGGAGGAGCTTATGACCACTGCCTCCCGAAGACACAATTCTTCTCGAATTT
TCATCACCAGCTCGAACAATAAGACCAATGAGGGACAGTACTCTGAGTTCTGGAATCGTAATGAAGATGGAAGCAATTCC
AATGAGGAAATATCAGATTCAGATGATGCCACTGAGGCTGCCAATAGCGTAACAGGACCTAAACTATCGAAAAAGTTGGG
ACTAGACGAGAAATTGGTTTTACTGGAGCAAGCTGAGGAAAAGTACTACGAAAGGAATAAACAGGTCAAAAAGTCAGAGA
AGAATGCAATATCTGAAGCCCTAAGGGATTCGAGCAAGCAGAGACTCTTGGATGCGTTGACACGAGTACTTCAGCTGCTT
GCCTGTGTGGAGGAGATTGATTCCCAGAAAGGATCCGAGTTTCTTGAAAATGAGTGCTATCGAAAATATAGCAAAGCAGG
GAAATCGTTTTACTACTCGCAGATAGCGAGTACTGTGAGATGGCTAGGAACCGCAAGCAGAGATGAGCTAATGACCCGAC
TTAGCTCAGTGGTCAGTTTGGCTAGAGAGCAAGAGCCATTAGAAGAGCCGTTGCTGGCTACTGAACCGGTGGAGAACATA
GAGGAAGAAGATGATGGTAAGACTAACACGGTCGAGTCAAGGGTTGATGAACCGACACAAGAGCTAGTGGTGAGTCCGAT
CCTTTCGCCTATAAGGCTTCCACAAGTTCCATCATTCTCAGAGTTTGTTAACCGGAGAAAAATAAAACAAAACACATTGA
TAGATAAATCTTCTGAAGGTTTTGATGACAAGAAACCGGCAAAGATAATGAAGCTTCAATAA