Microexon ID Vv_6:4230938-4230945:+
Species Vistis vinifera
Coordinates 6:4230938..4230945
Microexon Cluster ID MEP17
Size 8
Phase 1
Pfam Domain Motif IP_trans
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TAATCAAG
Microexon Amino Acid seq VIK
Microexon-tag DNA Seq CTCACCATGCAAGAGGAAGCATGGAATGCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGCT
Microexon-tag Amino Acid Seq LTMQEEAWNAYPRCKTVIKCPYFNKFCLAIDTVHKA
Microexon-tag spanning region4230783-4231103
Microexon-tag prediction score0.9744
Overlapped with the annotated transcript (%) 100
New Transcript ID VIT_06s0004g03370.t01x
Reference Transcript ID VIT_06s0004g03370.t01
Gene ID VIT_06s0004g03370
Gene Name NA
Transcript ID VIT_06s0004g03370.t01
Protein ID VIT_06s0004g03370.t01
Gene ID VIT_06s0004g03370
Gene Name NA
Pfam domain motif IP_trans
Motif E-value 2e-95
Motif start 1
Motif end 237
Protein seq >VIT_06s0004g03370.t01
MPMSLEEYQIAQMYMVLKMQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEAWN
AYPRCKTVIKCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEVIDIASAARDYWSYVVGGNSVDFSKFRSAKT
GRGPLLEGWQSCDPVMTAYKLVTVDAPYWGFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSL
DVKTSTKDLDRRWACDKEEEEVYMKKPQLNSEQQGLVNDSTFTNAPTNQLLF*
CDS seq >VIT_06s0004g03370.t01
ATGCCTATGTCGTTAGAAGAGTATCAAATAGCTCAAATGTACATGGTTCTAAAAATGCAACAGCAGACTACCACAAGTGA
TGAAGGGGTAGAGGTCTTGGAGAACAGATCTTTTCAAGATGATGCATTGGGAAAGGGACAGTACACATCAAAAGTTTATC
GTCTTCAAAGCAAAGTTCCTGCTTGGCTTACTACTTTTGCACCTGCAGATGCTCTCACCATGCAAGAGGAAGCATGGAAT
GCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGC
TGACAATGGACAGTCAGAAAATGTGCATGGTCTAAACAAAAAACAACTAGCAGCAAGGCAGGTAGAAGTTATTGATATAG
CTTCAGCTGCAAGAGACTATTGGAGTTATGTAGTTGGAGGAAATAGTGTGGATTTCTCCAAATTCAGATCAGCAAAAACT
GGGCGTGGTCCACTTTTGGAAGGATGGCAGAGCTGTGATCCAGTTATGACAGCATACAAATTAGTAACAGTAGATGCACC
ATATTGGGGCTTCGGTAATCGACTAGAACAAGCTTTTCTAGCGGGTGAAAGGGCACTTTTCCTAGAGAGTCATCGGAATT
GTTTTGGTTGGATAGATGAGTGGTTTGGGATGACAGTGCAACAATTACGTGAACTTGAAGAACAAACCAATTCCTCATTA
GATGTGAAAACAAGTACAAAAGATTTGGACAGAAGATGGGCATGTGACAAAGAAGAAGAAGAAGTGTATATGAAGAAGCC
CCAGCTTAACTCTGAGCAGCAAGGGTTGGTGAATGATTCCACTTTTACCAATGCACCCACAAATCAGCTTCTTTTTTAA
Microexon DNA seq TAATCAAG
Microexon Amino Acid seq VIK
Microexon-tag DNA Seq CTCACCATGCAAGAGGAAGCATGGAATGCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGCT
Microexon-tag Amino Acid seq LTMQEEAWNAYPRCKTVIKCPYFNKFCLAIDTVHKA
Transcript ID Vv.26660.1
Gene ID Vv.26660
Gene Name NA
Pfam domain motif IP_trans
Motif E-value 2e-95
Motif start 1
Motif end 237
Protein seq >Vv.26660.1
MPMSLEEYQIAQMYMVLKMQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEAWN
AYPRCKTVIKCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEVIDIASAARDYWSYVVGGNSVDFSKFRSAKT
GRGPLLEGWQSCDPVMTAYKLVTVDAPYWGFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSL
DVKTSTKDLDRRWACDKEEEEVYMKKPQLNSEQQGLVNDSTFTNAPTNQLLF*
CDS seq >Vv.26660.1
ATGCCTATGTCGTTAGAAGAGTATCAAATAGCTCAAATGTACATGGTTCTAAAAATGCAACAGCAGACTACCACAAGTGA
TGAAGGGGTAGAGGTCTTGGAGAACAGATCTTTTCAAGATGATGCATTGGGAAAGGGACAGTACACATCAAAAGTTTATC
GTCTTCAAAGCAAAGTTCCTGCTTGGCTTACTACTTTTGCACCTGCAGATGCTCTCACCATGCAAGAGGAAGCATGGAAT
GCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGC
TGACAATGGACAGTCAGAAAATGTGCATGGTCTAAACAAAAAACAACTAGCAGCAAGGCAGGTAGAAGTTATTGATATAG
CTTCAGCTGCAAGAGACTATTGGAGTTATGTAGTTGGAGGAAATAGTGTGGATTTCTCCAAATTCAGATCAGCAAAAACT
GGGCGTGGTCCACTTTTGGAAGGATGGCAGAGCTGTGATCCAGTTATGACAGCATACAAATTAGTAACAGTAGATGCACC
ATATTGGGGCTTCGGTAATCGACTAGAACAAGCTTTTCTAGCGGGTGAAAGGGCACTTTTCCTAGAGAGTCATCGGAATT
GTTTTGGTTGGATAGATGAGTGGTTTGGGATGACAGTGCAACAATTACGTGAACTTGAAGAACAAACCAATTCCTCATTA
GATGTGAAAACAAGTACAAAAGATTTGGACAGAAGATGGGCATGTGACAAAGAAGAAGAAGAAGTGTATATGAAGAAGCC
CCAGCTTAACTCTGAGCAGCAAGGGTTGGTGAATGATTCCACTTTTACCAATGCACCCACAAATCAGCTTCTTTTTTAA