
Microexon ID | Vv_6:4230938-4230945:+ |
Species | Vistis vinifera | Coordinates | 6:4230938..4230945 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TAATCAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCACCATGCAAGAGGAAGCATGGAATGCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGCT |
Microexon-tag Amino Acid Seq | LTMQEEAWNAYPRCKTVIKCPYFNKFCLAIDTVHKA |
Microexon-tag spanning region | 4230783-4231103 |
Microexon-tag prediction score | 0.9744 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_06s0004g03370.t01x |
Reference Transcript ID | VIT_06s0004g03370.t01 |
Gene ID | VIT_06s0004g03370 |
Gene Name | NA |
Transcript ID | VIT_06s0004g03370.t01 |
Protein ID | VIT_06s0004g03370.t01 |
Gene ID | VIT_06s0004g03370 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 2e-95 |
Motif start | 1 |
Motif end | 237 |
Protein seq | >VIT_06s0004g03370.t01 MPMSLEEYQIAQMYMVLKMQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEAWN AYPRCKTVIKCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEVIDIASAARDYWSYVVGGNSVDFSKFRSAKT GRGPLLEGWQSCDPVMTAYKLVTVDAPYWGFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSL DVKTSTKDLDRRWACDKEEEEVYMKKPQLNSEQQGLVNDSTFTNAPTNQLLF* |
CDS seq | >VIT_06s0004g03370.t01 ATGCCTATGTCGTTAGAAGAGTATCAAATAGCTCAAATGTACATGGTTCTAAAAATGCAACAGCAGACTACCACAAGTGA TGAAGGGGTAGAGGTCTTGGAGAACAGATCTTTTCAAGATGATGCATTGGGAAAGGGACAGTACACATCAAAAGTTTATC GTCTTCAAAGCAAAGTTCCTGCTTGGCTTACTACTTTTGCACCTGCAGATGCTCTCACCATGCAAGAGGAAGCATGGAAT GCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGC TGACAATGGACAGTCAGAAAATGTGCATGGTCTAAACAAAAAACAACTAGCAGCAAGGCAGGTAGAAGTTATTGATATAG CTTCAGCTGCAAGAGACTATTGGAGTTATGTAGTTGGAGGAAATAGTGTGGATTTCTCCAAATTCAGATCAGCAAAAACT GGGCGTGGTCCACTTTTGGAAGGATGGCAGAGCTGTGATCCAGTTATGACAGCATACAAATTAGTAACAGTAGATGCACC ATATTGGGGCTTCGGTAATCGACTAGAACAAGCTTTTCTAGCGGGTGAAAGGGCACTTTTCCTAGAGAGTCATCGGAATT GTTTTGGTTGGATAGATGAGTGGTTTGGGATGACAGTGCAACAATTACGTGAACTTGAAGAACAAACCAATTCCTCATTA GATGTGAAAACAAGTACAAAAGATTTGGACAGAAGATGGGCATGTGACAAAGAAGAAGAAGAAGTGTATATGAAGAAGCC CCAGCTTAACTCTGAGCAGCAAGGGTTGGTGAATGATTCCACTTTTACCAATGCACCCACAAATCAGCTTCTTTTTTAA |
Microexon DNA seq | TAATCAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCACCATGCAAGAGGAAGCATGGAATGCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGCT |
Microexon-tag Amino Acid seq | LTMQEEAWNAYPRCKTVIKCPYFNKFCLAIDTVHKA |
Transcript ID | Vv.26660.1 |
Gene ID | Vv.26660 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 2e-95 |
Motif start | 1 |
Motif end | 237 |
Protein seq | >Vv.26660.1 MPMSLEEYQIAQMYMVLKMQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEAWN AYPRCKTVIKCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEVIDIASAARDYWSYVVGGNSVDFSKFRSAKT GRGPLLEGWQSCDPVMTAYKLVTVDAPYWGFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSL DVKTSTKDLDRRWACDKEEEEVYMKKPQLNSEQQGLVNDSTFTNAPTNQLLF* |
CDS seq | >Vv.26660.1 ATGCCTATGTCGTTAGAAGAGTATCAAATAGCTCAAATGTACATGGTTCTAAAAATGCAACAGCAGACTACCACAAGTGA TGAAGGGGTAGAGGTCTTGGAGAACAGATCTTTTCAAGATGATGCATTGGGAAAGGGACAGTACACATCAAAAGTTTATC GTCTTCAAAGCAAAGTTCCTGCTTGGCTTACTACTTTTGCACCTGCAGATGCTCTCACCATGCAAGAGGAAGCATGGAAT GCATACCCAAGGTGCAAAACAGTAATCAAGTGCCCATACTTTAACAAGTTCTGTTTAGCCATTGACACTGTTCATAAAGC TGACAATGGACAGTCAGAAAATGTGCATGGTCTAAACAAAAAACAACTAGCAGCAAGGCAGGTAGAAGTTATTGATATAG CTTCAGCTGCAAGAGACTATTGGAGTTATGTAGTTGGAGGAAATAGTGTGGATTTCTCCAAATTCAGATCAGCAAAAACT GGGCGTGGTCCACTTTTGGAAGGATGGCAGAGCTGTGATCCAGTTATGACAGCATACAAATTAGTAACAGTAGATGCACC ATATTGGGGCTTCGGTAATCGACTAGAACAAGCTTTTCTAGCGGGTGAAAGGGCACTTTTCCTAGAGAGTCATCGGAATT GTTTTGGTTGGATAGATGAGTGGTTTGGGATGACAGTGCAACAATTACGTGAACTTGAAGAACAAACCAATTCCTCATTA GATGTGAAAACAAGTACAAAAGATTTGGACAGAAGATGGGCATGTGACAAAGAAGAAGAAGAAGTGTATATGAAGAAGCC CCAGCTTAACTCTGAGCAGCAAGGGTTGGTGAATGATTCCACTTTTACCAATGCACCCACAAATCAGCTTCTTTTTTAA |