Microexon ID Ta_4D:342790975-342790982:+
Species Triticum   Aestivum
Coordinates 4D:342790975..342790982
Microexon Cluster ID MEP17
Size 8
Phase 1
Pfam Domain Motif IP_trans
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGATCAAG
Microexon Amino Acid seq VIK
Microexon-tag DNA Seq CTCGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTGTTCACTGACGATTGACACTGTGATAAGACCT
Microexon-tag Amino Acid Seq LAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRP
Microexon-tag spanning region342790773-342791138
Microexon-tag prediction score0.941
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4D02G197500.1x
Reference Transcript ID TraesCS4D02G197500.1
Gene ID TraesCS4D02G197500
Gene Name NA
Transcript ID TraesCS4D02G197500.1
Protein ID
Gene ID TraesCS4D02G197500
Gene Name
Pfam domain motif IP_trans
Motif E-value 4.20E-86
Motif start 3
Motif end 247
Protein seq >TraesCS4D02G197500.1
MVQIKEFRIIMPMSMEEYEIGLSYTIMKMEQQNTNGKEGVEVLQQVPFEDEKLGEGQFTSKVYHLQSKIPSWMKGFASAS
SLAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAEREVEIVDIASVSRDYWSKVITAPKV
DLTTFKSQRTDRGPLLNGWMDSCRPVMTIYKLVIMDAPIWGLGERLEDCLIAGERALFLACHRMCFAWIDEWYGMTMEQI
REMERHTDLLLKKTLKKAAKPGSKHEGKRKSLKDEIAVVGSCT*
CDS seq >TraesCS4D02G197500.1
ATGGTTCAGATCAAGGAATTCCGAATCATCATGCCTATGTCGATGGAGGAGTATGAGATAGGGCTCAGCTACACCATCAT
GAAGATGGAGCAGCAGAATACAAATGGCAAGGAGGGCGTGGAGGTGCTGCAGCAGGTCCCTTTTGAGGATGAGAAACTGG
GCGAAGGCCAATTCACCTCGAAAGTTTATCATTTGCAGAGCAAAATTCCATCTTGGATGAAGGGCTTTGCATCCGCGAGT
TCTCTCGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTG
TTCACTGACGATTGACACTGTGATAAGACCTGACAACGGCTGCTCTGAAAATGCGCACAATCTAAACAGCCAGCAGCTAG
CTGAAAGAGAGGTGGAGATCGTCGACATCGCGTCAGTATCGCGGGACTACTGGAGCAAGGTGATCACTGCTCCAAAAGTC
GACCTCACAACTTTCAAGTCCCAACGGACGGACCGAGGCCCTCTTCTGAATGGGTGGATGGATTCTTGCCGTCCCGTGAT
GACCATATACAAGCTTGTGATCATGGATGCTCCCATCTGGGGCCTGGGCGAACGGCTCGAAGATTGCCTCATCGCGGGGG
AGAGGGCGCTGTTTCTGGCGTGCCACCGGATGTGCTTCGCGTGGATAGACGAGTGGTACGGCATGACCATGGAGCAGATC
CGGGAGATGGAGAGGCACACGGACCTACTCCTCAAGAAGACACTGAAAAAGGCTGCAAAACCTGGGAGCAAGCACGAGGG
CAAGAGGAAGTCCCTCAAAGACGAAATCGCCGTCGTGGGGAGCTGCACATAG
Ta_4D:342790975-342790982:+ does not have available information here.