
Microexon ID | Ta_4B:424749553-424749560:+ |
Species | Triticum Aestivum | Coordinates | 4B:424749553..424749560 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGATCAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTGGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTGTTCACTGACGATTGACACTGTGATAAGACCT |
Microexon-tag Amino Acid Seq | MAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRP |
Microexon-tag spanning region | 424749353-424749720 |
Microexon-tag prediction score | 0.9379 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4B02G197200.1x |
Reference Transcript ID | TraesCS4B02G197200.1 |
Gene ID | TraesCS4B02G197200 |
Gene Name | NA |
Transcript ID | TraesCS4B02G197200.1 |
Protein ID | |
Gene ID | TraesCS4B02G197200 |
Gene Name | |
Pfam domain motif | IP_trans |
Motif E-value | 3.60E-85 |
Motif start | 3 |
Motif end | 247 |
Protein seq | >TraesCS4B02G197200.1 MVQIKEFRIIMPMSMEEYEIGLSYTIIKMEQHNTNGKEGVEVLQQVPFEDEKLGEGQFTSKVYHLQSKIPSWMKGFASAS SLAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAAREVEIVDIASVSRDYWSKVITAPKV DLTTFKSQRTDRGPLLNGWMDSCRPVMTIYKLVVMDAPIWGLGERLEDCLIAGERALFLACHRLCFAWIDEWYGMTMEQI REMERHTDLLLKKTLKKAAKPGSKHEGKRKSLKDEIAVVGSCT* |
CDS seq | >TraesCS4B02G197200.1 ATGGTTCAGATCAAGGAATTCCGAATCATCATGCCTATGTCGATGGAGGAGTATGAGATAGGGCTCAGCTACACCATCAT CAAGATGGAGCAGCACAACACAAATGGCAAGGAGGGCGTGGAAGTGCTGCAGCAGGTCCCTTTTGAGGATGAGAAACTGG GCGAGGGCCAATTCACCTCGAAAGTTTATCATTTGCAGAGCAAAATTCCATCTTGGATGAAGGGCTTTGCATCCGCGAGT TCTCTGGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTG TTCACTGACGATTGACACTGTGATAAGACCTGACAACGGCTGCTCTGAAAATGCGCACAATCTAAACAGCCAGCAGCTAG CTGCAAGAGAGGTGGAGATCGTCGACATCGCGTCAGTATCGCGGGACTACTGGAGCAAGGTGATCACTGCTCCAAAAGTC GACCTCACAACTTTCAAGTCCCAACGGACGGACCGAGGCCCTCTTTTGAATGGGTGGATGGATTCATGCCGTCCCGTGAT GACCATATACAAGCTGGTGGTCATGGATGCTCCCATCTGGGGCCTGGGCGAACGGCTCGAAGACTGCCTCATCGCGGGGG AGAGGGCGCTGTTTCTGGCGTGCCACCGGCTGTGCTTCGCGTGGATAGACGAGTGGTACGGCATGACCATGGAGCAGATC CGGGAGATGGAGAGGCACACGGACCTACTCCTCAAGAAGACACTGAAAAAGGCTGCAAAACCTGGGAGCAAGCACGAGGG CAAGAGGAAGTCCCTCAAAGACGAAATCGCCGTCGTGGGGAGCTGCACATAG |
Ta_4B:424749553-424749560:+ does not have available information here.