Microexon ID Ta_4B:424749553-424749560:+
Species Triticum   Aestivum
Coordinates 4B:424749553..424749560
Microexon Cluster ID MEP17
Size 8
Phase 1
Pfam Domain Motif IP_trans
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGATCAAG
Microexon Amino Acid seq VIK
Microexon-tag DNA Seq CTGGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTGTTCACTGACGATTGACACTGTGATAAGACCT
Microexon-tag Amino Acid Seq MAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRP
Microexon-tag spanning region424749353-424749720
Microexon-tag prediction score0.9379
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4B02G197200.1x
Reference Transcript ID TraesCS4B02G197200.1
Gene ID TraesCS4B02G197200
Gene Name NA
Transcript ID TraesCS4B02G197200.1
Protein ID
Gene ID TraesCS4B02G197200
Gene Name
Pfam domain motif IP_trans
Motif E-value 3.60E-85
Motif start 3
Motif end 247
Protein seq >TraesCS4B02G197200.1
MVQIKEFRIIMPMSMEEYEIGLSYTIIKMEQHNTNGKEGVEVLQQVPFEDEKLGEGQFTSKVYHLQSKIPSWMKGFASAS
SLAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAAREVEIVDIASVSRDYWSKVITAPKV
DLTTFKSQRTDRGPLLNGWMDSCRPVMTIYKLVVMDAPIWGLGERLEDCLIAGERALFLACHRLCFAWIDEWYGMTMEQI
REMERHTDLLLKKTLKKAAKPGSKHEGKRKSLKDEIAVVGSCT*
CDS seq >TraesCS4B02G197200.1
ATGGTTCAGATCAAGGAATTCCGAATCATCATGCCTATGTCGATGGAGGAGTATGAGATAGGGCTCAGCTACACCATCAT
CAAGATGGAGCAGCACAACACAAATGGCAAGGAGGGCGTGGAAGTGCTGCAGCAGGTCCCTTTTGAGGATGAGAAACTGG
GCGAGGGCCAATTCACCTCGAAAGTTTATCATTTGCAGAGCAAAATTCCATCTTGGATGAAGGGCTTTGCATCCGCGAGT
TCTCTGGCTGTGCATGAGGACTCGTGGTCCGCGTATCCAAAGAGCAGAACAGTGATCAAGTGCCCGCTTTTTAGCAAGTG
TTCACTGACGATTGACACTGTGATAAGACCTGACAACGGCTGCTCTGAAAATGCGCACAATCTAAACAGCCAGCAGCTAG
CTGCAAGAGAGGTGGAGATCGTCGACATCGCGTCAGTATCGCGGGACTACTGGAGCAAGGTGATCACTGCTCCAAAAGTC
GACCTCACAACTTTCAAGTCCCAACGGACGGACCGAGGCCCTCTTTTGAATGGGTGGATGGATTCATGCCGTCCCGTGAT
GACCATATACAAGCTGGTGGTCATGGATGCTCCCATCTGGGGCCTGGGCGAACGGCTCGAAGACTGCCTCATCGCGGGGG
AGAGGGCGCTGTTTCTGGCGTGCCACCGGCTGTGCTTCGCGTGGATAGACGAGTGGTACGGCATGACCATGGAGCAGATC
CGGGAGATGGAGAGGCACACGGACCTACTCCTCAAGAAGACACTGAAAAAGGCTGCAAAACCTGGGAGCAAGCACGAGGG
CAAGAGGAAGTCCCTCAAAGACGAAATCGCCGTCGTGGGGAGCTGCACATAG
Ta_4B:424749553-424749560:+ does not have available information here.