Microexon ID Ta_4A:123075496-123075503:-
Species Triticum   Aestivum
Coordinates 4A:123075496..123075503
Microexon Cluster ID MEP17
Size 8
Phase 1
Pfam Domain Motif IP_trans
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TAATCAAG
Microexon Amino Acid seq VIK
Microexon-tag DNA Seq CTCGCAGTGCATGAGGACTCCTGGTCCGCTTATCCAAAGAGCAGAACAGTAATCAAGTGCCCTCTTTTTAGCAAGTGTTCCCTGACGATTGACACCGTGATAAGACCT
Microexon-tag Amino Acid Seq LAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRP
Microexon-tag spanning region123075331-123075703
Microexon-tag prediction score0.9362
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G107200.2x
Reference Transcript ID TraesCS4A02G107200.2
Gene ID TraesCS4A02G107200
Gene Name NA
Transcript ID TraesCS4A02G107200.2
Protein ID
Gene ID TraesCS4A02G107200
Gene Name
Pfam domain motif IP_trans
Motif E-value 1.70E-84
Motif start 3
Motif end 247
Protein seq >TraesCS4A02G107200.2
MVQIKEFRIIMPMLMEEYEIGLSYTIIKMEQQNTNGKEGVEVLQQVPFEDDELGEGQFTSKVYHLQSKIPSWMKGFASAS
SLAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAAREVEIVDIASVSRDYWSKVITAPKV
DLTTFKSQRTERGPLLNGWMDSCRPVMTIYKLVVMDAPIWGLGERLEDCLIAGERALFLACHRLCFAWIDEWYGMTMEQI
REMERHTDLLLKKTLKKAAKPGSKHEGKRKSLKDEIAVVGSCT*
CDS seq >TraesCS4A02G107200.2
ATGGTTCAGATCAAGGAATTCCGAATCATCATGCCTATGTTGATGGAGGAGTATGAGATAGGGCTCAGCTACACCATCAT
CAAGATGGAGCAGCAGAATACAAATGGAAAGGAGGGCGTGGAGGTGCTGCAGCAGGTCCCTTTTGAGGATGACGAGCTCG
GCGAGGGCCAATTCACCTCAAAAGTGTATCATCTGCAGAGCAAAATTCCATCTTGGATGAAGGGCTTTGCATCCGCAAGT
TCTCTCGCAGTGCATGAGGACTCCTGGTCCGCTTATCCAAAGAGCAGAACAGTAATCAAGTGCCCTCTTTTTAGCAAGTG
TTCCCTGACGATTGACACCGTGATAAGACCTGACAACGGCTGCTCTGAAAATGCGCACAATTTAAACAGCCAGCAGCTAG
CTGCAAGAGAGGTGGAGATCGTCGACATCGCGTCAGTATCGCGGGACTACTGGAGCAAGGTGATCACTGCTCCAAAAGTC
GACCTCACAACATTCAAGTCCCAACGGACGGAGCGAGGCCCTCTTCTGAATGGGTGGATGGATTCATGCCGTCCCGTGAT
GACCATATACAAGCTGGTGGTCATGGATGCTCCCATCTGGGGCTTGGGCGAACGGCTCGAAGACTGCCTCATCGCGGGGG
AGAGGGCGCTGTTTCTGGCGTGCCACCGGCTGTGCTTCGCGTGGATAGACGAGTGGTACGGCATGACCATGGAGCAGATC
CGGGAGATGGAGAGGCACACGGACCTACTCCTCAAAAAGACACTGAAAAAGGCTGCAAAACCTGGGAGCAAGCACGAGGG
CAAGAGGAAGTCGCTCAAAGACGAAATCGCCGTTGTGGGGAGCTGCACCTAG
Ta_4A:123075496-123075503:- does not have available information here.