
Microexon ID | Ta_4A:123075496-123075503:- |
Species | Triticum Aestivum | Coordinates | 4A:123075496..123075503 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TAATCAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCGCAGTGCATGAGGACTCCTGGTCCGCTTATCCAAAGAGCAGAACAGTAATCAAGTGCCCTCTTTTTAGCAAGTGTTCCCTGACGATTGACACCGTGATAAGACCT |
Microexon-tag Amino Acid Seq | LAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRP |
Microexon-tag spanning region | 123075331-123075703 |
Microexon-tag prediction score | 0.9362 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G107200.2x |
Reference Transcript ID | TraesCS4A02G107200.2 |
Gene ID | TraesCS4A02G107200 |
Gene Name | NA |
Transcript ID | TraesCS4A02G107200.2 |
Protein ID | |
Gene ID | TraesCS4A02G107200 |
Gene Name | |
Pfam domain motif | IP_trans |
Motif E-value | 1.70E-84 |
Motif start | 3 |
Motif end | 247 |
Protein seq | >TraesCS4A02G107200.2 MVQIKEFRIIMPMLMEEYEIGLSYTIIKMEQQNTNGKEGVEVLQQVPFEDDELGEGQFTSKVYHLQSKIPSWMKGFASAS SLAVHEDSWSAYPKSRTVIKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAAREVEIVDIASVSRDYWSKVITAPKV DLTTFKSQRTERGPLLNGWMDSCRPVMTIYKLVVMDAPIWGLGERLEDCLIAGERALFLACHRLCFAWIDEWYGMTMEQI REMERHTDLLLKKTLKKAAKPGSKHEGKRKSLKDEIAVVGSCT* |
CDS seq | >TraesCS4A02G107200.2 ATGGTTCAGATCAAGGAATTCCGAATCATCATGCCTATGTTGATGGAGGAGTATGAGATAGGGCTCAGCTACACCATCAT CAAGATGGAGCAGCAGAATACAAATGGAAAGGAGGGCGTGGAGGTGCTGCAGCAGGTCCCTTTTGAGGATGACGAGCTCG GCGAGGGCCAATTCACCTCAAAAGTGTATCATCTGCAGAGCAAAATTCCATCTTGGATGAAGGGCTTTGCATCCGCAAGT TCTCTCGCAGTGCATGAGGACTCCTGGTCCGCTTATCCAAAGAGCAGAACAGTAATCAAGTGCCCTCTTTTTAGCAAGTG TTCCCTGACGATTGACACCGTGATAAGACCTGACAACGGCTGCTCTGAAAATGCGCACAATTTAAACAGCCAGCAGCTAG CTGCAAGAGAGGTGGAGATCGTCGACATCGCGTCAGTATCGCGGGACTACTGGAGCAAGGTGATCACTGCTCCAAAAGTC GACCTCACAACATTCAAGTCCCAACGGACGGAGCGAGGCCCTCTTCTGAATGGGTGGATGGATTCATGCCGTCCCGTGAT GACCATATACAAGCTGGTGGTCATGGATGCTCCCATCTGGGGCTTGGGCGAACGGCTCGAAGACTGCCTCATCGCGGGGG AGAGGGCGCTGTTTCTGGCGTGCCACCGGCTGTGCTTCGCGTGGATAGACGAGTGGTACGGCATGACCATGGAGCAGATC CGGGAGATGGAGAGGCACACGGACCTACTCCTCAAAAAGACACTGAAAAAGGCTGCAAAACCTGGGAGCAAGCACGAGGG CAAGAGGAAGTCGCTCAAAGACGAAATCGCCGTTGTGGGGAGCTGCACCTAG |
Ta_4A:123075496-123075503:- does not have available information here.