
Microexon ID | Ps_NC_039368.1:80588987-80588994:+ |
Species | Papaver somniferum | Coordinates | NC_039368.1:80588987..80588994 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGATTAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTTGAGAGATTCAACTTATCCATTGAAACTATTCATAAGGCT |
Microexon-tag Amino Acid Seq | LLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKA |
Microexon-tag spanning region | 80588815-80589175 |
Microexon-tag prediction score | 0.9362 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026571819.1x |
Reference Transcript ID | XM_026571819.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026571819.1 |
Protein ID | XP_026427604.1 |
Gene ID | LOC113323501 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 4.2e-103 |
Motif start | 3 |
Motif end | 247 |
Protein seq | >XP_026427604.1 MVQLREFRIVMPMSLDEYQVAQMYMVMKMQHQSTSNSEGVEVLENRPFKDDVFGKGQYTSKVYHLQSKIPTWLTTFAPAD ALLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKADNGNSENVHGLSKEQLATREVVIIDIASTVTDYWSYAIGTSHV DLSKFKSLRTNRGPLLEGWQDLCEPVMTAYKLVTIDAPYWGFGYRLEQALLSAERALFLESHRNCFAWIDEWYGMTMEQI RELEKQSDSSLNEKLGKIASVDGTHGLDLNDSDKNMKQLN* |
CDS seq | >XM_026571819.1 ATGGTTCAACTCAGAGAATTTCGGATTGTCATGCCTATGTCGCTTGATGAGTATCAGGTAGCCCAGATGTATATGGTAAT GAAGATGCAACATCAAAGTACGTCGAATAGTGAAGGTGTGGAGGTGTTAGAAAACAGACCGTTTAAAGATGATGTTTTTG GTAAGGGTCAGTACACATCTAAAGTGTATCACTTGCAGAGCAAAATTCCTACTTGGCTCACTACTTTTGCACCCGCAGAT GCTCTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTTGAGAGATT CAACTTATCCATTGAAACTATTCATAAGGCTGACAATGGGAACTCAGAAAATGTGCATGGTTTAAGCAAAGAACAGCTAG CGACCAGGGAAGTAGTGATTATTGATATAGCTTCAACTGTGACGGATTATTGGAGCTATGCTATTGGTACCAGCCATGTG GATTTGAGCAAATTCAAATCATTGAGGACAAACCGGGGTCCGCTTTTGGAGGGATGGCAGGATCTGTGTGAACCAGTAAT GACAGCATATAAACTGGTGACGATAGATGCTCCATACTGGGGTTTTGGGTATCGACTGGAACAAGCTTTGCTTTCTGCTG AAAGGGCACTCTTTCTGGAAAGCCATAGGAACTGCTTCGCTTGGATTGATGAATGGTATGGGATGACAATGGAGCAAATA CGAGAACTTGAAAAACAAAGTGATTCGTCACTGAATGAGAAACTGGGGAAGATAGCTTCAGTGGACGGTACACATGGTCT CGACCTAAATGACAGTGACAAGAATATGAAGCAACTAAACTAG |
Microexon DNA seq | TGATTAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTTGAGAGATTCAACTTATCCATTGAAACTATTCATAAGGCT |
Microexon-tag Amino Acid seq | LLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKA |
Transcript ID | XM_026571819.1 |
Gene ID | Ps.66635 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 4.3e-103 |
Motif start | 3 |
Motif end | 247 |
Protein seq | >XM_026571819.1 MVQLREFRIVMPMSLDEYQVAQMYMVMKMQHQSTSNSEGVEVLENRPFKDDVFGKGQYTSKVYHLQSKIPTWLTTFAPAD ALLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKADNGNSENVHGLSKEQLATREVVIIDIASTVTDYWSYAIGTSHV DLSKFKSLRTNRGPLLEGWQDLCEPVMTAYKLVTIDAPYWGFGYRLEQALLSAERALFLESHRNCFAWIDEWYGMTMEQI RELEKQSDSSLNEKLGKIASVDGTHGLDLNDSDKNMKQLN* |
CDS seq | >XM_026571819.1 ATGGTTCAACTCAGAGAATTTCGGATTGTCATGCCTATGTCGCTTGATGAGTATCAGGTAGCCCAGATGTATATGGTAAT GAAGATGCAACATCAAAGTACGTCGAATAGTGAAGGTGTGGAGGTGTTAGAAAACAGACCGTTTAAAGATGATGTTTTTG GTAAGGGTCAGTACACATCTAAAGTGTATCACTTGCAGAGCAAAATTCCTACTTGGCTCACTACTTTTGCACCCGCAGAT GCTCTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTTGAGAGATT CAACTTATCCATTGAAACTATTCATAAGGCTGACAATGGGAACTCAGAAAATGTGCATGGTTTAAGCAAAGAACAGCTAG CGACCAGGGAAGTAGTGATTATTGATATAGCTTCAACTGTGACGGATTATTGGAGCTATGCTATTGGTACCAGCCATGTG GATTTGAGCAAATTCAAATCATTGAGGACAAACCGGGGTCCGCTTTTGGAGGGATGGCAGGATCTGTGTGAACCAGTAAT GACAGCATATAAACTGGTGACGATAGATGCTCCATACTGGGGTTTTGGGTATCGACTGGAACAAGCTTTGCTTTCTGCTG AAAGGGCACTCTTTCTGGAAAGCCATAGGAACTGCTTCGCTTGGATTGATGAATGGTATGGGATGACAATGGAGCAAATA CGAGAACTTGAAAAACAAAGTGATTCGTCACTGAATGAGAAACTGGGGAAGATAGCTTCAGTGGACGGTACACATGGTCT CGACCTAAATGACAGTGACAAGAATATGAAGCAACTAAACTAG |