
Microexon ID | Ps_NC_039366.1:28283026-28283033:+ |
Species | Papaver somniferum | Coordinates | NC_039366.1:28283026..28283033 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TGATTAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | CTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTCGAGAGATTCAACTTATCCATTGAAACTATTCATAAGGCT |
Microexon-tag Amino Acid Seq | LLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKA |
Microexon-tag spanning region | 28282856-28283214 |
Microexon-tag prediction score | 0.9363 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026557103.1x |
Reference Transcript ID | XM_026557103.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026557103.1 |
Protein ID | XP_026412888.1 |
Gene ID | LOC113308637 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 6.3e-103 |
Motif start | 3 |
Motif end | 247 |
Protein seq | >XP_026412888.1 MVQLREFRIVMPMSLDEYQVAQMYMVMKMQQQSTSNNEGVEVLENRPFKDDVFGKGQYTSKVYHLQSKIPTWLTTFAPAD ALLMQEEAWNAYPRCKTVIKCPYFERFNLSIETIHKADNGNSENVHGLSKEQLATREVVIIDIASTVTDYWSYAIGTSPV DLSKFKSSRTNRGPLLEGWQDLCEPVMTAYKLVTVDAPYWGFGYRLEQALLSAERALFLESHRNCFAWIDDWYGMTMEQI RELEKQSDSSLNEKLGKVASVDDTQGLDLNDSDKNMKQLS* |
CDS seq | >XM_026557103.1 ATGGTTCAACTCAGAGAATTTCGGATTGTCATGCCTATGTCGCTTGATGAGTATCAGGTAGCCCAGATGTATATGGTAAT GAAGATGCAACAGCAAAGTACGTCGAATAATGAAGGTGTGGAGGTGTTAGAAAACAGACCATTTAAAGATGATGTGTTTG GGAAGGGTCAGTACACATCTAAAGTGTATCACTTGCAGAGCAAAATTCCTACTTGGCTCACTACTTTTGCACCCGCAGAT GCTCTCCTCATGCAGGAAGAAGCTTGGAATGCTTATCCAAGATGTAAAACAGTGATTAAGTGCCCGTACTTCGAGAGATT CAACTTATCCATTGAAACTATTCATAAGGCTGACAATGGGAACTCAGAAAATGTGCATGGTTTAAGCAAAGAACAGCTAG CGACCAGGGAAGTAGTGATTATTGATATAGCTTCAACTGTGACGGATTATTGGAGCTATGCTATTGGTACCAGCCCTGTG GATTTGAGCAAATTCAAATCATCGAGGACAAACCGCGGTCCGCTATTGGAGGGATGGCAGGATCTGTGTGAACCAGTAAT GACAGCATATAAACTGGTGACGGTAGATGCTCCATACTGGGGTTTTGGGTATCGACTGGAACAAGCTTTACTTTCCGCTG AAAGGGCACTCTTTCTGGAAAGCCATAGGAACTGCTTTGCTTGGATTGATGATTGGTATGGGATGACAATGGAGCAAATA CGAGAACTTGAAAAACAAAGTGATTCGTCACTGAATGAGAAACTGGGGAAGGTAGCTTCAGTGGACGACACACAAGGTCT CGACTTAAATGACAGTGACAAGAATATGAAGCAACTAAGCTAG |
Microexon DNA seq | TGATTAAG |
Microexon Amino Acid seq | VIK |
Microexon-tag DNA Seq | ATGTGTTTGGGAAGGGTCAGTACACATCTAAAGTGTATCACTTGCAGAGTGATTAAGTGCCCGTACTTCGAGAGATTCAACTTATCCATTGAAACTATTCATAAGGCT |
Microexon-tag Amino Acid seq | MCLGRVSTHLKCITCRVIKCPYFERFNLSIETIHKA |
Transcript ID | Ps.54159.2 |
Gene ID | Ps.54159 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 2.2e-54 |
Motif start | 12 |
Motif end | 167 |
Protein seq | >Ps.54159.2 MMCLGRVSTHLKCITCRVIKCPYFERFNLSIETIHKADNGNSENVHGLSKEQLATREVVIIDIASTVTDYWSYAIGTSPV DLSKFKSSRTNRGPLLEGWQDLCEPVMTAYKLVTVDAPYWGFGYRLEQALLSAERALFLESHRNCFAWIDDWYGMTMEQI RELEKQSDSSLNEKLGKVASVDDTQGLDLNDSDKNMKQLS* |
CDS seq | >Ps.54159.2 ATGATGTGTTTGGGAAGGGTCAGTACACATCTAAAGTGTATCACTTGCAGAGTGATTAAGTGCCCGTACTTCGAGAGATT CAACTTATCCATTGAAACTATTCATAAGGCTGACAATGGGAACTCAGAAAATGTGCATGGTTTAAGCAAAGAACAGCTAG CGACCAGGGAAGTAGTGATTATTGATATAGCTTCAACTGTGACGGATTATTGGAGCTATGCTATTGGTACCAGCCCTGTG GATTTGAGCAAATTCAAATCATCGAGGACAAACCGCGGTCCGCTATTGGAGGGATGGCAGGATCTGTGTGAACCAGTAAT GACAGCATATAAACTGGTGACGGTAGATGCTCCATACTGGGGTTTTGGGTATCGACTGGAACAAGCTTTACTTTCCGCTG AAAGGGCACTCTTTCTGGAAAGCCATAGGAACTGCTTTGCTTGGATTGATGATTGGTATGGGATGACAATGGAGCAAATA CGAGAACTTGAAAAACAAAGTGATTCGTCACTGAATGAGAAACTGGGGAAGGTAGCTTCAGTGGACGACACACAAGGTCT CGACTTAAATGACAGTGACAAGAATATGAAGCAACTAAGCTAG |