
Microexon ID | Pp_15:14706063-14706070:+ |
Species | Physcomitrium patens | Coordinates | 15:14706063..14706070 |
Microexon Cluster ID | MEP17 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | IP_trans |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | CTYRYSRTGCAAGAGGAAKCYTGGWATGCRTAYCCAARRWGCARAACAGTRATCAAGTGCCCRYAYTTYASCAAGTKYWCWYTRACCATTGAMACYRTYMAYARRSCY |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | TCTTGAAG |
Microexon Amino Acid seq | VLK |
Microexon-tag DNA Seq | TTGATGCTTGAGGAAGAGGCTTGGAATGCTTATCCGAAATGCACTACTGTCTTGAAGTGCCCTTATTTTAATAAGCTCCGACTGATATTGGAAACCACTCACCTACCC |
Microexon-tag Amino Acid Seq | MMLEEEAWNAYPKCTTVLKCPYFNKLRLILETTHLP |
Microexon-tag spanning region | 14705780-14706356 |
Microexon-tag prediction score | 0.8631 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c15_22830V3.1x |
Reference Transcript ID | Pp3c15_22830V3.1 |
Gene ID | Pp3c15_22830 |
Gene Name | NA |
Transcript ID | Pp3c15_22830V3.1 |
Protein ID | Pp3c15_22830V3.1 |
Gene ID | Pp3c15_22830 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 9.7e-106 |
Motif start | 4 |
Motif end | 245 |
Protein seq | >Pp3c15_22830V3.1 MVAVQEYRIVLPFTVEEYKIAQLYMVAKFSASESSGGDGDGVEVLKNEPYEENDTRGQYTHKIYHLANKLPSWLVSLVPK KALMLEEEAWNAYPKCTTVLKCPYFNKLRLILETTHLPDRGTTENALNLDAKTVKKRQVEFIDIAMDPVENYVESEDPLK FKSQKTGRGPLQEGWQKTCEPVMCAYKCVTVDVPYWGFGSRLEKFISKNAQRKILLEGHRKCFCWLDEWHGLTMEDVRRM EDETAEALAKARALVLKNNGAQENGGTESEVPAEAEAETTPKMDDHDKVLGSRVSSISRTKDGTGSPRLMRRPSLVGPSV AMGITTMSASDVGEEDGFHLASTAPPLPSPKWKSSSIRNSIPASSEKVTLDNGGGSSESFSSLKDESNWESANGHDDNEV AACVAVLDRAIAWAKARSAKLATQPSRPAKGVVAPIGSPIAGGPEDQGNLIKFENLTGAVTVIDKTMSAVKRRPTTQPKL SHSLTAS* |
CDS seq | >Pp3c15_22830V3.1 ATGGTGGCTGTACAAGAATACCGTATTGTGCTTCCGTTTACGGTGGAAGAGTACAAGATTGCTCAGCTGTATATGGTTGC TAAATTCAGTGCCAGTGAATCATCCGGAGGTGATGGGGACGGTGTTGAGGTGTTGAAAAACGAGCCTTATGAAGAGAATG ATACTCGTGGCCAGTATACGCATAAAATATATCACCTAGCTAACAAGTTGCCAAGTTGGCTCGTGAGCCTGGTGCCAAAG AAAGCTTTGATGCTTGAGGAAGAGGCTTGGAATGCTTATCCGAAATGCACTACTGTCTTGAAGTGCCCTTATTTTAATAA GCTCCGACTGATATTGGAAACCACTCACCTACCCGATCGGGGGACAACTGAAAATGCTCTGAATCTGGACGCCAAAACCG TCAAGAAGCGGCAAGTCGAGTTCATTGACATTGCCATGGATCCTGTGGAGAATTATGTCGAGAGTGAAGATCCACTGAAG TTCAAGTCACAAAAAACCGGCAGGGGTCCTCTGCAAGAAGGCTGGCAGAAAACATGTGAACCAGTCATGTGTGCATACAA GTGTGTGACAGTTGACGTGCCCTACTGGGGGTTTGGTTCGCGGCTTGAGAAGTTCATTTCCAAGAATGCACAAAGAAAAA TCCTGCTGGAAGGTCACCGGAAATGTTTCTGCTGGCTTGATGAGTGGCATGGATTAACCATGGAAGATGTTCGTCGCATG GAAGATGAGACCGCGGAAGCTCTGGCAAAAGCTCGAGCTCTGGTGTTAAAGAACAATGGGGCCCAGGAAAACGGGGGCAC AGAATCTGAAGTACCTGCGGAAGCTGAGGCTGAAACTACACCGAAGATGGATGATCATGACAAGGTATTGGGGTCTCGGG TTTCATCGATCTCTAGAACCAAAGACGGTACTGGGAGCCCTCGTCTTATGAGACGGCCAAGTCTGGTTGGTCCTTCAGTT GCAATGGGCATCACAACCATGTCTGCTTCTGATGTTGGAGAGGAAGATGGCTTTCATTTAGCCAGCACAGCGCCACCACT GCCGTCTCCAAAATGGAAATCGAGCTCTATCCGGAACTCTATTCCTGCTAGTTCTGAGAAGGTTACGCTCGACAACGGTG GTGGATCATCCGAGTCTTTCTCCTCGTTGAAAGATGAGTCGAATTGGGAGTCAGCTAATGGACATGATGACAATGAGGTA GCAGCTTGTGTTGCAGTGCTCGACCGGGCCATAGCATGGGCCAAGGCCAGATCCGCAAAGCTAGCCACTCAGCCATCACG TCCAGCCAAGGGTGTGGTTGCTCCGATTGGCTCTCCTATTGCTGGTGGTCCTGAAGACCAAGGGAATCTGATAAAGTTCG AGAACTTAACAGGTGCTGTGACAGTCATTGACAAAACTATGTCTGCAGTCAAGCGGCGTCCAACAACTCAGCCGAAGCTG AGCCACAGTCTCACTGCATCATAG |
Microexon DNA seq | TCTTGAAG |
Microexon Amino Acid seq | VLK |
Microexon-tag DNA Seq | TTGATGCTTGAGGAAGAGGCTTGGAATGCTTATCCGAAATGCACTACTGTCTTGAAGTGCCCTTATTTTAATAAGCTCCGACTGATATTGGAAACCACTCACCTACCC |
Microexon-tag Amino Acid seq | MMLEEEAWNAYPKCTTVLKCPYFNKLRLILETTHLP |
Transcript ID | Pp.7210.1 |
Gene ID | Pp.7210 |
Gene Name | NA |
Pfam domain motif | IP_trans |
Motif E-value | 9.7e-106 |
Motif start | 4 |
Motif end | 245 |
Protein seq | >Pp.7210.1 MVAVQEYRIVLPFTVEEYKIAQLYMVAKFSASESSGGDGDGVEVLKNEPYEENDTRGQYTHKIYHLANKLPSWLVSLVPK KALMLEEEAWNAYPKCTTVLKCPYFNKLRLILETTHLPDRGTTENALNLDAKTVKKRQVEFIDIAMDPVENYVESEDPLK FKSQKTGRGPLQEGWQKTCEPVMCAYKCVTVDVPYWGFGSRLEKFISKNAQRKILLEGHRKCFCWLDEWHGLTMEDVRRM EDETAEALAKARALVLKNNGAQENGGTESEVPAEAEAETTPMDDHDKVLGSRVSSISRTKDGTGSPRLMRRPSLVGPSVA MGITTMSASDVGEEDGFHLASTAPPLPSPKWKSSSIRNSIPASSEKVTLDNGGGSSESFSSLKDESNWESANGHDDNEVA ACVAVLDRAIAWAKARSAKLATQPSRPAKGVVAPIGSPIAGGPEDQGNLIKFENLTGAVTVIDKTMSAVKRRPTTQPKLS HSLTAS* |
CDS seq | >Pp.7210.1 ATGGTGGCTGTACAAGAATACCGTATTGTGCTTCCGTTTACGGTGGAAGAGTACAAGATTGCTCAGCTGTATATGGTTGC TAAATTCAGTGCCAGTGAATCATCCGGAGGTGATGGGGACGGTGTTGAGGTGTTGAAAAACGAGCCTTATGAAGAGAATG ATACTCGTGGCCAGTATACGCATAAAATATATCACCTAGCTAACAAGTTGCCAAGTTGGCTCGTGAGCCTGGTGCCAAAG AAAGCTTTGATGCTTGAGGAAGAGGCTTGGAATGCTTATCCGAAATGCACTACTGTCTTGAAGTGCCCTTATTTTAATAA GCTCCGACTGATATTGGAAACCACTCACCTACCCGATCGGGGGACAACTGAAAATGCTCTGAATCTGGACGCCAAAACCG TCAAGAAGCGGCAAGTCGAGTTCATTGACATTGCCATGGATCCTGTGGAGAATTATGTCGAGAGTGAAGATCCACTGAAG TTCAAGTCACAAAAAACCGGCAGGGGTCCTCTGCAAGAAGGCTGGCAGAAAACATGTGAACCAGTCATGTGTGCATACAA GTGTGTGACAGTTGACGTGCCCTACTGGGGGTTTGGTTCGCGGCTTGAGAAGTTCATTTCCAAGAATGCACAAAGAAAAA TCCTGCTGGAAGGTCACCGGAAATGTTTCTGCTGGCTTGATGAGTGGCATGGATTAACCATGGAAGATGTTCGTCGCATG GAAGATGAGACCGCGGAAGCTCTGGCAAAAGCTCGAGCTCTGGTGTTAAAGAACAATGGGGCCCAGGAAAACGGGGGCAC AGAATCTGAAGTACCTGCGGAAGCTGAGGCTGAAACTACACCGATGGATGATCATGACAAGGTATTGGGGTCTCGGGTTT CATCGATCTCTAGAACCAAAGACGGTACTGGGAGCCCTCGTCTTATGAGACGGCCAAGTCTGGTTGGTCCTTCAGTTGCA ATGGGCATCACAACCATGTCTGCTTCTGATGTTGGAGAGGAAGATGGCTTTCATTTAGCCAGCACAGCGCCACCACTGCC GTCTCCAAAATGGAAATCGAGCTCTATCCGGAACTCTATTCCTGCTAGTTCTGAGAAGGTTACGCTCGACAACGGTGGTG GATCATCCGAGTCTTTCTCCTCGTTGAAAGATGAGTCGAATTGGGAGTCAGCTAATGGACATGATGACAATGAGGTAGCA GCTTGTGTTGCAGTGCTCGACCGGGCCATAGCATGGGCCAAGGCCAGATCCGCAAAGCTAGCCACTCAGCCATCACGTCC AGCCAAGGGTGTGGTTGCTCCGATTGGCTCTCCTATTGCTGGTGGTCCTGAAGACCAAGGGAATCTGATAAAGTTCGAGA ACTTAACAGGTGCTGTGACAGTCATTGACAAAACTATGTCTGCAGTCAAGCGGCGTCCAACAACTCAGCCGAAGCTGAGC CACAGTCTCACTGCATCATAG |