
Microexon ID | Ps_NC_039368.1:74467548-74467555:- |
Species | Papaver somniferum | Coordinates | NC_039368.1:74467548..74467555 |
Microexon Cluster ID | MEP16 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | SNF2_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGCTATTTGAAG |
Microexon-tag Amino Acid Seq | ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLSYLK |
Microexon-tag spanning region | 74467229-74467692 |
Microexon-tag prediction score | 0.9451 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026572882.1x |
Reference Transcript ID | XM_026572882.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026572882.1 |
Protein ID | XP_026428667.1 |
Gene ID | LOC113324571 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 1.7e-26 |
Motif start | 60 |
Motif end | 182 |
Protein seq | >XP_026428667.1 MLMNYKERLKAAADLVISSDHHQSDVLLLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLS YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRRDLRRKAFEQASTDFPFDVLLTTYDIVLMDKEF LSQIPWHYAVIDEAQRLKNPSSFTFAFNTLASA* |
CDS seq | >XM_026572882.1 ATGTTGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGCGATCATCATCAAAGTGACGTACT CCTGTTAAACTACGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGC TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA AGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGCGACAAAGAAGTCAGACGCGATCTTCGCAGGAAAG CTTTTGAGCAGGCTAGCACAGACTTTCCTTTTGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGAATTT CTTTCTCAAATTCCATGGCACTATGCTGTAATTGATGAAGCACAGCGACTTAAAAATCCTTCCAGTTTCACCTTTGCGTT CAACACACTTGCATCTGCCTAA |
Ps_NC_039368.1:74467548-74467555:- does not have available information here.