Microexon ID Ps_NC_039368.1:74467548-74467555:-
Species Papaver somniferum
Coordinates NC_039368.1:74467548..74467555
Microexon Cluster ID MEP16
Size 8
Phase 1
Pfam Domain Motif SNF2_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAGACGAG
Microexon Amino Acid seq GDE
Microexon-tag DNA Seq ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGCTATTTGAAG
Microexon-tag Amino Acid Seq ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLSYLK
Microexon-tag spanning region74467229-74467692
Microexon-tag prediction score0.9451
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026572882.1x
Reference Transcript ID XM_026572882.1
Gene ID NA
Gene Name NA
Transcript ID XM_026572882.1
Protein ID XP_026428667.1
Gene ID LOC113324571
Gene Name NA
Pfam domain motif SNF2_N
Motif E-value 1.7e-26
Motif start 60
Motif end 182
Protein seq >XP_026428667.1
MLMNYKERLKAAADLVISSDHHQSDVLLLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLS
YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRRDLRRKAFEQASTDFPFDVLLTTYDIVLMDKEF
LSQIPWHYAVIDEAQRLKNPSSFTFAFNTLASA*
CDS seq >XM_026572882.1
ATGTTGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGCGATCATCATCAAAGTGACGTACT
CCTGTTAAACTACGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA
GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGC
TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA
AGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGCGACAAAGAAGTCAGACGCGATCTTCGCAGGAAAG
CTTTTGAGCAGGCTAGCACAGACTTTCCTTTTGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGAATTT
CTTTCTCAAATTCCATGGCACTATGCTGTAATTGATGAAGCACAGCGACTTAAAAATCCTTCCAGTTTCACCTTTGCGTT
CAACACACTTGCATCTGCCTAA
Ps_NC_039368.1:74467548-74467555:- does not have available information here.