
Microexon ID | Ps_NC_039368.1:139407411-139407418:+ |
Species | Papaver somniferum | Coordinates | NC_039368.1:139407411..139407418 |
Microexon Cluster ID | MEP16 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | SNF2_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATCTATTTGAAG |
Microexon-tag Amino Acid Seq | ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLIYLK |
Microexon-tag spanning region | 139407274-139407738 |
Microexon-tag prediction score | 0.9364 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026571437.1x |
Reference Transcript ID | XM_026571437.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026571437.1 |
Protein ID | XP_026427222.1 |
Gene ID | LOC113323168 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 1e-18 |
Motif start | 58 |
Motif end | 158 |
Protein seq | >XP_026427222.1 MSMNYKERLKAAADLVISRDHHQSDVLPLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLI YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRLDLRRKAFEQASTDFPFDVLLTTYDIVLMDKGL SFSNSMELCCN* |
CDS seq | >XM_026571437.1 ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGGGATCATCATCAAAGTGACGTACT CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATC TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGAGACAAAGAAGTCAGACTCGATCTTCGCAGGAAAG CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGGACTT TCTTTCTCAAATTCCATGGAACTATGCTGTAATTGA |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATCTATTTGAAG |
Microexon-tag Amino Acid seq | ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLIYLK |
Transcript ID | XM_026571437.1 |
Gene ID | Ps.68690 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 1e-18 |
Motif start | 58 |
Motif end | 158 |
Protein seq | >XM_026571437.1 MSMNYKERLKAAADLVISRDHHQSDVLPLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLI YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRLDLRRKAFEQASTDFPFDVLLTTYDIVLMDKGL SFSNSMELCCN* |
CDS seq | >XM_026571437.1 ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGGGATCATCATCAAAGTGACGTACT CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATC TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGAGACAAAGAAGTCAGACTCGATCTTCGCAGGAAAG CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGGACTT TCTTTCTCAAATTCCATGGAACTATGCTGTAATTGA |