Microexon ID Ps_NC_039368.1:139407411-139407418:+
Species Papaver somniferum
Coordinates NC_039368.1:139407411..139407418
Microexon Cluster ID MEP16
Size 8
Phase 1
Pfam Domain Motif SNF2_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAGACGAG
Microexon Amino Acid seq GDE
Microexon-tag DNA Seq ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATCTATTTGAAG
Microexon-tag Amino Acid Seq ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLIYLK
Microexon-tag spanning region139407274-139407738
Microexon-tag prediction score0.9364
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026571437.1x
Reference Transcript ID XM_026571437.1
Gene ID NA
Gene Name NA
Transcript ID XM_026571437.1
Protein ID XP_026427222.1
Gene ID LOC113323168
Gene Name NA
Pfam domain motif SNF2_N
Motif E-value 1e-18
Motif start 58
Motif end 158
Protein seq >XP_026427222.1
MSMNYKERLKAAADLVISRDHHQSDVLPLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLI
YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRLDLRRKAFEQASTDFPFDVLLTTYDIVLMDKGL
SFSNSMELCCN*
CDS seq >XM_026571437.1
ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGGGATCATCATCAAAGTGACGTACT
CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA
GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATC
TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA
GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGAGACAAAGAAGTCAGACTCGATCTTCGCAGGAAAG
CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGGACTT
TCTTTCTCAAATTCCATGGAACTATGCTGTAATTGA
Microexon DNA seq GAGACGAG
Microexon Amino Acid seq GDE
Microexon-tag DNA Seq ATTTCATGGCTTATACAAAGATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATCTATTTGAAG
Microexon-tag Amino Acid seq ISWLIQRYLTGVNVILGDEMGLGKTLQAITFLIYLK
Transcript ID XM_026571437.1
Gene ID Ps.68690
Gene Name NA
Pfam domain motif SNF2_N
Motif E-value 1e-18
Motif start 58
Motif end 158
Protein seq >XM_026571437.1
MSMNYKERLKAAADLVISRDHHQSDVLPLNYDEIGIKATLKPHQIEGISWLIQRYLTGVNVILGDEMGLGKTLQAITFLI
YLKFHLKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRLDLRRKAFEQASTDFPFDVLLTTYDIVLMDKGL
SFSNSMELCCN*
CDS seq >XM_026571437.1
ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTAGTTATTTCTAGGGATCATCATCAAAGTGACGTACT
CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTGAAGGAATTTCATGGCTTATACAAA
GATATCTTACTGGTGTCAATGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAATC
TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA
GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGAGACAAAGAAGTCAGACTCGATCTTCGCAGGAAAG
CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGGACTT
TCTTTCTCAAATTCCATGGAACTATGCTGTAATTGA