Microexon ID Ps_NC_039365.1:173240791-173240798:+
Species Papaver somniferum
Coordinates NC_039365.1:173240791..173240798
Microexon Cluster ID MEP16
Size 8
Phase 1
Pfam Domain Motif SNF2_N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,8,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq GAGACGAG
Microexon Amino Acid seq GDE
Microexon-tag DNA Seq ATTTTATGGCTTATACAAAGATATCTTACTGGTGTCAATTTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGCTATTTGAAG
Microexon-tag Amino Acid Seq ILWLIQRYLTGVNFILGDEMGLGKTLQAITFLSYLK
Microexon-tag spanning region173240654-173241118
Microexon-tag prediction score0.9229
Overlapped with the annotated transcript (%) 100
New Transcript ID XM_026552916.1x
Reference Transcript ID XM_026552916.1
Gene ID NA
Gene Name NA
Transcript ID XM_026552916.1
Protein ID XP_026408701.1
Gene ID LOC113303829
Gene Name NA
Pfam domain motif SNF2_N
Motif E-value 1.5e-09
Motif start 61
Motif end 105
Protein seq >XP_026408701.1
MSMNYKERLKEAADLVISSDHHQSDVLPLNYDEIGIKATLKPHQIQGILWLIQRYLTGVNFILGDEMGLGKTLQAITFLS
YLKFHLKSPGPFLVICPLSVTDGWVS*
CDS seq >XM_026552916.1
ATGTCGATGAATTACAAGGAGAGACTAAAAGAAGCAGCAGATTTAGTTATTTCTAGCGATCATCATCAAAGTGACGTACT
CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTCAAGGAATTTTATGGCTTATACAAA
GATATCTTACTGGTGTCAATTTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGC
TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCATA
G
Ps_NC_039365.1:173240791-173240798:+ does not have available information here.