
Microexon ID | Ps_NC_039365.1:173240791-173240798:+ |
Species | Papaver somniferum | Coordinates | NC_039365.1:173240791..173240798 |
Microexon Cluster ID | MEP16 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | SNF2_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | ATTTTATGGCTTATACAAAGATATCTTACTGGTGTCAATTTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGCTATTTGAAG |
Microexon-tag Amino Acid Seq | ILWLIQRYLTGVNFILGDEMGLGKTLQAITFLSYLK |
Microexon-tag spanning region | 173240654-173241118 |
Microexon-tag prediction score | 0.9229 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026552916.1x |
Reference Transcript ID | XM_026552916.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026552916.1 |
Protein ID | XP_026408701.1 |
Gene ID | LOC113303829 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 1.5e-09 |
Motif start | 61 |
Motif end | 105 |
Protein seq | >XP_026408701.1 MSMNYKERLKEAADLVISSDHHQSDVLPLNYDEIGIKATLKPHQIQGILWLIQRYLTGVNFILGDEMGLGKTLQAITFLS YLKFHLKSPGPFLVICPLSVTDGWVS* |
CDS seq | >XM_026552916.1 ATGTCGATGAATTACAAGGAGAGACTAAAAGAAGCAGCAGATTTAGTTATTTCTAGCGATCATCATCAAAGTGACGTACT CCCGTTAAACTATGATGAGATTGGCATAAAGGCTACACTGAAGCCTCATCAAATTCAAGGAATTTTATGGCTTATACAAA GATATCTTACTGGTGTCAATTTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGC TATTTGAAGTTCCATTTGAAATCACCTGGGCCATTCTTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCATA G |
Ps_NC_039365.1:173240791-173240798:+ does not have available information here.