
Microexon ID | Ps_NC_039360.1:15669537-15669544:- |
Species | Papaver somniferum | Coordinates | NC_039360.1:15669537..15669544 |
Microexon Cluster ID | MEP16 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | SNF2_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | GTTTCATGGCTTATTCAAAGATATCTTACCGGTGTCAACGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGTTATTTGAAG |
Microexon-tag Amino Acid Seq | VSWLIQRYLTGVNVILGDEMGLGKTLQAITFLSYLK |
Microexon-tag spanning region | 15669188-15669682 |
Microexon-tag prediction score | 0.9454 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026598243.1x |
Reference Transcript ID | XM_026598243.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026598243.1 |
Protein ID | XP_026454028.1 |
Gene ID | LOC113355391 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 6.1e-50 |
Motif start | 58 |
Motif end | 339 |
Protein seq | >XP_026454028.1 MSMNYKERLKAAADFVISNDHHQNEVLPLNYDEIGIKATLKPHQIEGVSWLIQRYLTGVNVILGDEMGLGKTLQAITFLS YLKFHMKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRRDLRRKAFEQASTDFPFDVLLTTYDIVLMDKDF LSQIPWHYAVIDEAQRLKNPSSVLYSVLEQLFVIPRRLLITGTPIQNNLSELWSLMHFCLPMVFGTLEQFLSTFKEAGDL STGLDAAMVKEGFKTLKYILRAFMLRRTKAMLVECGTLVLPRLTEMTVMAPLVTLQKKVYMSILRKELPKLIAFSSGASS PSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDHLLQKLHNDGHRVLLFSQMTHTLDILQDYLELRKY TYERLDGSVRAEERFGAIRRFSEQPVKGISNSQNDHNGAFVFLISTRAGGVGLNLVGADTVIFYEQDWNPQVDKQALQRV HRIGQINPVLSINLVTARTVEEVIMRRAERKLQLSHNVVGEDDMSYDQDEMGADVGDLRSVIFGLHMFDPTNIDNENPNE VNTRELISMAEKVTKMRHESSDNQDRKFELNSMDVLGGDDFSMKRTPAYDSFDPGLDEASYLSWVEKFKEASQSTDNSNL VLGKRNLPDERIEKLEAAKRKAEEKKLLKWETLGYQSLAITDVPVCNADEDLMLTGSGSVQFVYGDCTDPSKVSPSEPAI IFSGVDNSGNWGRGGMFDALAKLSASIPEAYHRASEFGDLHMGDLHLIKIKIDEDQEKQTPDANDPMWVALAVVQSYNAR RKVPRSDISIPDLETSLSKASYAASQHSASIHLPRIGYQSGNGRSEWYTVERLLRKYASMYGIKIFVYYFRRSG* |
CDS seq | >XM_026598243.1 ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTTGTTATTTCTAACGATCATCATCAAAATGAAGTACT CCCGTTAAACTATGATGAGATTGGCATAAAAGCTACACTGAAACCTCATCAAATCGAAGGAGTTTCATGGCTTATTCAAA GATATCTTACCGGTGTCAACGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGT TATTTGAAGTTCCATATGAAATCACCTGGGCCATTCCTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGCGACAAAGAAGTCAGACGCGATCTTCGCAGAAAAG CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGATTTT CTTTCTCAAATTCCATGGCACTATGCTGTAATTGATGAAGCGCAGCGACTTAAAAATCCTTCCAGTGTTTTATACAGTGT ATTGGAACAACTTTTTGTCATTCCACGAAGGTTATTGATTACGGGAACCCCCATTCAGAATAATCTTTCTGAACTGTGGT CTCTTATGCATTTTTGTCTGCCTATGGTCTTTGGTACACTGGAGCAATTTCTATCCACATTTAAGGAGGCTGGAGATCTC TCAACAGGTCTTGACGCAGCTATGGTTAAGGAGGGATTCAAAACTTTGAAATATATACTAAGAGCGTTTATGCTTCGGAG AACAAAAGCTATGCTTGTTGAGTGTGGAACTCTTGTCTTGCCACGCCTCACTGAAATGACAGTGATGGCACCGCTGGTAA CCCTGCAAAAAAAGGTGTACATGTCAATATTGAGGAAGGAGCTTCCGAAGCTCATTGCATTCTCTTCAGGAGCTTCTAGC CCGTCCTTGCAAAATATTGTAATACAGCTGCGGAAAGCATGTAGTCATCCGTACCTCTTCCCTGGTATAGAGCCTGAACC ATATGAAGAGGGTGAACACCTGGTCCAGGCCAGTGGCAAACTTCTTATCTTGGACCACCTTCTTCAAAAGCTACATAATG ATGGACATAGGGTTTTACTGTTTTCCCAGATGACTCATACACTTGATATTCTCCAGGATTATCTAGAGTTACGGAAATAT ACATATGAACGTCTTGATGGTTCTGTTCGTGCTGAGGAACGCTTTGGGGCAATAAGACGGTTCAGTGAGCAACCCGTAAA GGGCATTTCGAACTCCCAAAATGATCATAATGGTGCATTTGTCTTTTTGATCTCAACTAGAGCAGGTGGAGTTGGCCTAA ATCTTGTTGGTGCTGATACTGTTATATTCTACGAACAAGATTGGAATCCTCAGGTGGATAAACAGGCTTTGCAGCGTGTG CACAGAATTGGACAGATAAATCCAGTTTTATCTATAAATTTAGTAACAGCTCGAACGGTGGAGGAGGTCATTATGCGGAG AGCAGAGAGGAAGTTGCAGCTTAGCCATAACGTGGTAGGCGAGGATGATATGAGTTATGACCAAGATGAAATGGGAGCTG ATGTCGGTGACCTGCGCTCTGTCATATTTGGGTTACACATGTTTGATCCCACAAACATTGATAACGAGAATCCGAATGAA GTTAACACAAGGGAATTGATTTCGATGGCTGAGAAGGTAACAAAAATGCGCCATGAATCATCTGACAACCAGGATAGAAA ATTTGAGCTTAATTCGATGGATGTGTTGGGGGGAGATGATTTTTCCATGAAACGTACTCCCGCTTATGATAGTTTTGATC CTGGCCTCGATGAGGCATCCTATCTCTCGTGGGTTGAAAAGTTCAAAGAGGCATCGCAGTCTACTGATAACTCCAATCTG GTGTTGGGCAAAAGAAACTTACCCGACGAGAGGATAGAAAAACTTGAAGCTGCAAAGAGAAAAGCTGAGGAGAAAAAGTT GTTGAAGTGGGAAACTCTTGGTTACCAGTCGCTAGCTATTACTGATGTTCCTGTTTGCAATGCGGATGAAGATCTGATGT TGACTGGCTCGGGCTCGGTTCAGTTTGTGTATGGGGATTGTACTGATCCATCTAAAGTTAGCCCATCTGAGCCTGCTATC ATATTTAGTGGTGTTGATAATTCTGGAAATTGGGGGCGTGGAGGAATGTTTGATGCACTTGCTAAGCTTTCAGCAAGTAT CCCAGAGGCTTATCACCGGGCTTCTGAATTTGGAGACCTTCATATGGGTGATCTCCATTTAATAAAAATAAAAATAGACG AGGACCAAGAAAAGCAAACTCCTGATGCAAATGATCCTATGTGGGTGGCGTTGGCTGTTGTACAATCCTATAATGCTAGG CGTAAGGTCCCACGTAGCGATATCTCTATCCCTGACTTGGAGACTAGCTTGTCAAAGGCATCATATGCTGCCTCTCAGCA TTCAGCGTCAATCCACTTACCACGCATTGGATATCAAAGTGGAAATGGACGGTCAGAGTGGTACACAGTGGAACGGCTTT TGCGGAAATATGCATCTATGTATGGCATCAAGATTTTCGTGTATTACTTTCGGCGCTCGGGTTGA |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | GTTTCATGGCTTATTCAAAGATATCTTACCGGTGTCAACGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGTTATTTGAAG |
Microexon-tag Amino Acid seq | VSWLIQRYLTGVNVILGDEMGLGKTLQAITFLSYLK |
Transcript ID | XM_026598243.1 |
Gene ID | Ps.15785 |
Gene Name | NA |
Pfam domain motif | SNF2_N |
Motif E-value | 6.1e-50 |
Motif start | 58 |
Motif end | 339 |
Protein seq | >XM_026598243.1 MSMNYKERLKAAADFVISNDHHQNEVLPLNYDEIGIKATLKPHQIEGVSWLIQRYLTGVNVILGDEMGLGKTLQAITFLS YLKFHMKSPGPFLVICPLSVTDGWVSEVAKFCPKLRVLRYVGDKEVRRDLRRKAFEQASTDFPFDVLLTTYDIVLMDKDF LSQIPWHYAVIDEAQRLKNPSSVLYSVLEQLFVIPRRLLITGTPIQNNLSELWSLMHFCLPMVFGTLEQFLSTFKEAGDL STGLDAAMVKEGFKTLKYILRAFMLRRTKAMLVECGTLVLPRLTEMTVMAPLVTLQKKVYMSILRKELPKLIAFSSGASS PSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDHLLQKLHNDGHRVLLFSQMTHTLDILQDYLELRKY TYERLDGSVRAEERFGAIRRFSEQPVKGISNSQNDHNGAFVFLISTRAGGVGLNLVGADTVIFYEQDWNPQVDKQALQRV HRIGQINPVLSINLVTARTVEEVIMRRAERKLQLSHNVVGEDDMSYDQDEMGADVGDLRSVIFGLHMFDPTNIDNENPNE VNTRELISMAEKVTKMRHESSDNQDRKFELNSMDVLGGDDFSMKRTPAYDSFDPGLDEASYLSWVEKFKEASQSTDNSNL VLGKRNLPDERIEKLEAAKRKAEEKKLLKWETLGYQSLAITDVPVCNADEDLMLTGSGSVQFVYGDCTDPSKVSPSEPAI IFSGVDNSGNWGRGGMFDALAKLSASIPEAYHRASEFGDLHMGDLHLIKIKIDEDQEKQTPDANDPMWVALAVVQSYNAR RKVPRSDISIPDLETSLSKASYAASQHSASIHLPRIGYQSGNGRSEWYTVERLLRKYASMYGIKIFVYYFRRSG* |
CDS seq | >XM_026598243.1 ATGTCGATGAATTACAAGGAGAGACTAAAAGCAGCAGCAGATTTTGTTATTTCTAACGATCATCATCAAAATGAAGTACT CCCGTTAAACTATGATGAGATTGGCATAAAAGCTACACTGAAACCTCATCAAATCGAAGGAGTTTCATGGCTTATTCAAA GATATCTTACCGGTGTCAACGTTATTCTTGGAGACGAGATGGGTCTTGGGAAGACTTTGCAAGCCATTACTTTCTTAAGT TATTTGAAGTTCCATATGAAATCACCTGGGCCATTCCTGGTAATATGCCCTCTCAGTGTGACAGATGGTTGGGTATCAGA GGTAGCAAAGTTTTGTCCTAAATTGAGGGTTCTACGATATGTTGGCGACAAAGAAGTCAGACGCGATCTTCGCAGAAAAG CTTTTGAGCAGGCTAGCACAGACTTTCCTTTCGATGTCCTTTTGACTACGTATGACATTGTGTTGATGGATAAGGATTTT CTTTCTCAAATTCCATGGCACTATGCTGTAATTGATGAAGCGCAGCGACTTAAAAATCCTTCCAGTGTTTTATACAGTGT ATTGGAACAACTTTTTGTCATTCCACGAAGGTTATTGATTACGGGAACCCCCATTCAGAATAATCTTTCTGAACTGTGGT CTCTTATGCATTTTTGTCTGCCTATGGTCTTTGGTACACTGGAGCAATTTCTATCCACATTTAAGGAGGCTGGAGATCTC TCAACAGGTCTTGACGCAGCTATGGTTAAGGAGGGATTCAAAACTTTGAAATATATACTAAGAGCGTTTATGCTTCGGAG AACAAAAGCTATGCTTGTTGAGTGTGGAACTCTTGTCTTGCCACGCCTCACTGAAATGACAGTGATGGCACCGCTGGTAA CCCTGCAAAAAAAGGTGTACATGTCAATATTGAGGAAGGAGCTTCCGAAGCTCATTGCATTCTCTTCAGGAGCTTCTAGC CCGTCCTTGCAAAATATTGTAATACAGCTGCGGAAAGCATGTAGTCATCCGTACCTCTTCCCTGGTATAGAGCCTGAACC ATATGAAGAGGGTGAACACCTGGTCCAGGCCAGTGGCAAACTTCTTATCTTGGACCACCTTCTTCAAAAGCTACATAATG ATGGACATAGGGTTTTACTGTTTTCCCAGATGACTCATACACTTGATATTCTCCAGGATTATCTAGAGTTACGGAAATAT ACATATGAACGTCTTGATGGTTCTGTTCGTGCTGAGGAACGCTTTGGGGCAATAAGACGGTTCAGTGAGCAACCCGTAAA GGGCATTTCGAACTCCCAAAATGATCATAATGGTGCATTTGTCTTTTTGATCTCAACTAGAGCAGGTGGAGTTGGCCTAA ATCTTGTTGGTGCTGATACTGTTATATTCTACGAACAAGATTGGAATCCTCAGGTGGATAAACAGGCTTTGCAGCGTGTG CACAGAATTGGACAGATAAATCCAGTTTTATCTATAAATTTAGTAACAGCTCGAACGGTGGAGGAGGTCATTATGCGGAG AGCAGAGAGGAAGTTGCAGCTTAGCCATAACGTGGTAGGCGAGGATGATATGAGTTATGACCAAGATGAAATGGGAGCTG ATGTCGGTGACCTGCGCTCTGTCATATTTGGGTTACACATGTTTGATCCCACAAACATTGATAACGAGAATCCGAATGAA GTTAACACAAGGGAATTGATTTCGATGGCTGAGAAGGTAACAAAAATGCGCCATGAATCATCTGACAACCAGGATAGAAA ATTTGAGCTTAATTCGATGGATGTGTTGGGGGGAGATGATTTTTCCATGAAACGTACTCCCGCTTATGATAGTTTTGATC CTGGCCTCGATGAGGCATCCTATCTCTCGTGGGTTGAAAAGTTCAAAGAGGCATCGCAGTCTACTGATAACTCCAATCTG GTGTTGGGCAAAAGAAACTTACCCGACGAGAGGATAGAAAAACTTGAAGCTGCAAAGAGAAAAGCTGAGGAGAAAAAGTT GTTGAAGTGGGAAACTCTTGGTTACCAGTCGCTAGCTATTACTGATGTTCCTGTTTGCAATGCGGATGAAGATCTGATGT TGACTGGCTCGGGCTCGGTTCAGTTTGTGTATGGGGATTGTACTGATCCATCTAAAGTTAGCCCATCTGAGCCTGCTATC ATATTTAGTGGTGTTGATAATTCTGGAAATTGGGGGCGTGGAGGAATGTTTGATGCACTTGCTAAGCTTTCAGCAAGTAT CCCAGAGGCTTATCACCGGGCTTCTGAATTTGGAGACCTTCATATGGGTGATCTCCATTTAATAAAAATAAAAATAGACG AGGACCAAGAAAAGCAAACTCCTGATGCAAATGATCCTATGTGGGTGGCGTTGGCTGTTGTACAATCCTATAATGCTAGG CGTAAGGTCCCACGTAGCGATATCTCTATCCCTGACTTGGAGACTAGCTTGTCAAAGGCATCATATGCTGCCTCTCAGCA TTCAGCGTCAATCCACTTACCACGCATTGGATATCAAAGTGGAAATGGACGGTCAGAGTGGTACACAGTGGAACGGCTTT TGCGGAAATATGCATCTATGTATGGCATCAAGATTTTCGTGTATTACTTTCGGCGCTCGGGTTGA |