| Microexon ID | Bn_scaffoldC04:5011854-5011861:- |
| Species | Brassica Napus | Coordinates | scaffoldC04:5011854..5011861 |
| Microexon Cluster ID | MEP16 |
| Size | 8 |
| Phase | 1 |
| Pfam Domain Motif | SNF2_N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | GAGACGAG |
| Microexon Amino Acid seq | GDE |
| Microexon-tag DNA Seq | GTCTCTTGGCTTATACACAAATATCTCCTCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTGGGGAAGACTCTACAAGCGATTTCGTTCTTGAGTTATCTGAAG |
| Microexon-tag Amino Acid Seq | VSWLIHKYLLGVNVVLGDEMGLGKTLQAISFLSYLK |
| Microexon-tag spanning region | 5011722-5011998 |
| Microexon-tag prediction score | 0.9415 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC04T0055400ZSx |
| Reference Transcript ID | BnaC04T0055400ZS |
| Gene ID | BnaC04G0055400ZS |
| Gene Name | NA |
| Transcript ID | BnaC04T0055400ZS |
| Protein ID | |
| Gene ID | BnaC04G0055400ZS |
| Gene Name | |
| Pfam domain motif | SNF2-rel_dom |
| Motif E-value | 5.90E-68 |
| Motif start | 40 |
| Motif end | 342 |
| Protein seq | >BnaC04T0055400ZS MEYQRRLEAATNIILTANSKASHAPPDCREFGVTATLKPHQVEGVSWLIHKYLLGVNVVLGDEMGLGKTLQAISFLSYLK FHQGLRGPFLVLCPLSVTDGWVAEINRFTPKLEVIRYVGDKDCRRDLRKVMYDHVNKSSKGSLLPFDVLLTTYDIALVDQ DFLSQIPWQYAVIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKDTG ESLSGLDASNVKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYMSILRKELPGLLALSSGA STHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLAQASGKLLVLDQLLKRLHDIGHRVLLFSQMTSTLDILQDFMEL RKYSYERLDGSVRAEERFAAIKSFSAKTERGLDSEADASNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQ RAHRIGQISHVLSINLVSEHTVEEVILRRAERKLQLSHNVVGDTTEDKEEDRGDLRSLVFGLQRFDPEETHNEESDNLKM VEISSLAEKVVAIRQNVEPDKEARKFEINTSETLRGSSSSAASVYSELDEASYLSWVEKLKEAARSSKDENVMELGDRKN VSEERRERVEAARKKAEEKKLATWEEHGYESLSVEEPIFPEDVDSTSDAGSVQFVFGDCTNPSTVSQEPAIIFSCVDDSG TWGRGGMFNALSKLSSTVPDAYHRASEFKDLHLGDVHLIKIDDNDEQQNTEDSKRLWVALAVTQSYRPKRKVPRSSISIP DLERCLAKASFSASQRSASLHMPRIGYQDGSDRSQWYTVERLLRKYSSIFAVKIFVYYYRRSP* |
| CDS seq | >BnaC04T0055400ZS ATGGAGTACCAACGGCGACTCGAAGCGGCGACCAACATCATACTCACCGCGAATTCGAAAGCAAGCCACGCGCCTCCCGA TTGCAGAGAGTTCGGTGTCACAGCGACTCTAAAGCCTCACCAAGTCGAAGGAGTCTCTTGGCTTATACACAAATATCTCC TCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTGGGGAAGACTCTACAAGCGATTTCGTTCTTGAGTTATCTGAAG TTTCATCAAGGATTGCGAGGGCCATTTCTTGTGCTTTGTCCTTTGAGCGTGACGGATGGTTGGGTGGCAGAGATAAACAG GTTCACTCCAAAACTTGAAGTTATTAGGTATGTTGGTGATAAGGATTGCCGTAGGGATTTGCGTAAGGTGATGTATGATC ATGTCAACAAGAGCTCTAAGGGATCTTTGTTGCCGTTTGATGTGTTGTTGACAACGTATGATATAGCATTGGTGGATCAA GACTTTCTTTCTCAGATTCCGTGGCAGTATGCTGTAATTGATGAAGCTCAAAGACTCAAGAATCCCAACAGTGTTCTGTA CAATGTGTTACTTGAACAATTTCTCATACCACGGCGTCTCTTGATTACTGGCACGCCTATTCAGAACAATCTTACCGAAC TTTGGGCTCTCATGCATTTTTGCATGCCACTAGTTTTTGGGACTCTGGACCAGTTCCTTTCCGCATTCAAAGACACTGGC GAGTCTTTATCAGGTCTTGATGCGTCAAATGTCAAGGAAACATATAAGAGTTTGAAGTTTATCTTAGGTGCCTTTATGCT ACGGCGTACAAAATCTTTGCTAATTGAGTCTGGGAACCTGGTGCTGCCACCTCTCACGGAGCTAACTGTAATGGTTCCGC TCGTTAGTCTGCAAAAGAAGATATATATGTCAATATTGAGGAAAGAGCTTCCCGGGCTTCTCGCACTTTCTTCTGGAGCA TCCACTCATACGTCTTTGCAAAATATTGTGATACAGCTCAGAAAAGCATGTAGCCACCCTTACTTATTTCCAGGTATTGA ACCGGAACCTTTTGAAGAGGGTGAACACCTCGCTCAGGCGAGTGGTAAGCTTTTAGTTTTAGACCAACTGCTCAAGAGGC TCCATGATATTGGACATCGTGTCCTCCTGTTTTCCCAAATGACCTCTACACTTGACATTCTTCAGGATTTTATGGAGCTT CGTAAATATTCTTATGAGCGTCTTGATGGATCAGTACGGGCTGAAGAACGTTTTGCTGCGATCAAGAGTTTCAGCGCTAA AACAGAAAGAGGATTGGATTCTGAAGCTGATGCCAGCAATGCCTTTGTTTTCATGATCTCAACAAGAGCAGGGGGAGTCG GTTTGAATCTTGTTGCTGCTGACACTGTTATATTCTATGAACAAGATTGGAACCCGCAGGTGGATAAGCAAGCTTTGCAG CGAGCTCATCGGATCGGACAAATCAGTCACGTGCTGTCTATAAACCTCGTGTCTGAACACACTGTGGAAGAGGTTATTTT GAGGAGGGCAGAGAGAAAGCTGCAGCTTAGTCATAACGTTGTGGGAGATACTACGGAAGATAAAGAAGAAGATCGTGGTG ATTTGCGGTCCCTGGTGTTTGGTTTACAAAGGTTTGACCCTGAGGAGACTCACAACGAAGAATCTGATAACCTGAAAATG GTGGAAATCAGTTCTCTTGCTGAGAAAGTTGTTGCAATCCGTCAGAACGTTGAGCCGGATAAGGAAGCAAGAAAGTTTGA AATTAATACTAGTGAGACTCTGAGAGGAAGTTCATCATCTGCCGCTAGTGTGTATTCCGAGCTTGATGAAGCTTCGTACC TTTCATGGGTTGAGAAACTGAAGGAAGCAGCACGGTCAAGCAAGGATGAGAATGTTATGGAGTTGGGAGATAGAAAGAAC GTGTCTGAGGAAAGACGTGAGAGAGTTGAAGCTGCGAGGAAAAAGGCAGAGGAAAAGAAGTTAGCCACTTGGGAAGAACA TGGTTATGAGTCTTTGTCTGTGGAAGAGCCAATCTTCCCTGAGGACGTTGACTCTACTTCAGATGCAGGATCTGTTCAAT TTGTATTTGGAGACTGTACGAATCCATCAACTGTCTCTCAGGAGCCAGCAATCATATTCAGCTGTGTTGATGACTCTGGA ACCTGGGGGCGTGGAGGAATGTTTAATGCTCTGTCAAAACTGTCCAGTACTGTACCCGATGCGTATCACCGAGCATCTGA ATTTAAAGACCTTCATCTTGGAGATGTGCATCTCATAAAAATTGATGACAATGATGAGCAACAAAACACAGAAGATAGCA AACGTCTTTGGGTGGCACTTGCAGTCACACAATCTTATAGACCGAAGCGTAAAGTCCCACGTAGTAGCATTTCGATTCCA GACCTTGAACGTTGCTTGGCCAAAGCTTCATTCTCAGCATCTCAGAGATCAGCTTCACTACACATGCCACGTATTGGTTA CCAAGACGGATCAGATAGATCTCAATGGTACACTGTTGAACGTCTTCTGCGCAAGTACTCATCCATCTTTGCCGTCAAGA TATTCGTGTACTATTACCGTCGATCTCCCTGA |
Bn_scaffoldC04:5011854-5011861:- does not have available information here.