
Microexon ID | At_2:18556312-18556319:- |
Species | Arabidopsis thaliana | Coordinates | 2:18556312..18556319 |
Microexon Cluster ID | MEP16 |
Size | 8 |
Phase | 1 |
Pfam Domain Motif | SNF2_N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,8,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | BTWWMHTGGCTYATACGAHKRTATSAGMWYGGYRTMAAYGKMATTCTYGSWGATGARATGGGWCTKGGRAARACWYTKCAARCYATHTCHTTSYTGRGYTAYYTRMAT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | GTCTCTTGGCTTATACAGAAATATCTACTCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTGGGAAAGACTCTCCAAGCAATCTCTTTCCTGAGTTATTTGAAG |
Microexon-tag Amino Acid Seq | VSWLIQKYLLGVNVVLGDEMGLGKTLQAISFLSYLK |
Microexon-tag spanning region | 18556182-18556495 |
Microexon-tag prediction score | 0.9406 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | AT2G44980.3x |
Reference Transcript ID | AT2G44980.3 |
Gene ID | AT2G44980 |
Gene Name | CHR10 |
Transcript ID | AT2G44980.3 |
Protein ID | AT2G44980.3 |
Gene ID | AT2G44980 |
Gene Name | CHR10 |
Pfam domain motif | SNF2_N |
Motif E-value | 3.5e-49 |
Motif start | 71 |
Motif end | 356 |
Protein seq | >AT2G44980.3 MSKESSPPKVPSTTMEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLGDEMGL GKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPF DVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVF GTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSIL RKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQ MTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFY EQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSLVFGLQRFD PEEIHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLGNTSSASLDSELDEASYLSWVEKLKEAARSS KDEKIIELGNRKNLSEERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPSTVSH EPAIIFSCVDDSGNWGRGGMFDALSKLSNTVPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAVTQSYN SRRKVPRSSISIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERLLRKYSSIFTVKIFVYYYRRSP* |
CDS seq | >AT2G44980.3 ATGTCAAAAGAGAGTTCACCGCCAAAAGTCCCTTCCACGACGATGGAGTATGAACGGCGACTTGAAGCGGCGGCGGAAAT TATACTCGAGAAGGAGGCGAAATTTAGCAACACACCTCCGGATTGTAGTGAATTTGGGGTCACGGCGACTCTAAAGCCTC ACCAAGTCGAAGGTGTCTCTTGGCTTATACAGAAATATCTACTCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTG GGAAAGACTCTCCAAGCAATCTCTTTCCTGAGTTATTTGAAGTTTCGTCAAGGCTTGCCTGGGCCATTTCTGGTGCTATG TCCCTTAAGTGTAACGGATGGTTGGGTATCAGAGATAAATAGGTTCACTCCAAATCTTGAAGTTCTTAGATATGTTGGCG ATAAGTATTGCCGTCTGGATATGCGTAAGTCAATGTATGATCATGTCAAGAAGAGTTCTAAGGGACATTTCTTACCATTT GATGTATTGCTGACAACATATGACATAGCATTGGTGGATCAAGACTTTCTTTCTCAAATTCCTTGGCAATATGCTATAAT TGATGAAGCTCAAAGACTCAAGAATCCTAACAGTGTTCTGTATAATGTCTTACTTGAGCAATTCCTCATTCCACGACGTC TCTTGATTACTGGCACACCTATCCAGAACAATCTTACCGAACTTTGGGCTCTGATGCATTTTTGCATGCCACTAGTTTTT GGGACACTGGACCAGTTCCTTTCCGCATTCAAAGAGACTGGGGACGGTCTATCAGGTCTTGATGTATCTAATGACAAGGA AACATATAAGAGTCTGAAGTTCATCTTAGGTGCCTTTATGCTGAGGCGTACAAAATCTTTGCTCATTGAGTCTGGAAATC TGGTGCTGCCACCTCTCACGGAGCTAACTGTAATGGTTCCGCTCGTCAGTCTTCAAAAGAAGATATATACTTCCATTTTG AGGAAAGAGCTTCCAGGGCTTCTTGAACTGTCTTCTGGAGGATCAAATCATACGTCTTTACAAAATATTGTGATACAGCT AAGAAAAGCATGTAGCCACCCTTACTTATTTCCAGGTATCGAACCAGAGCCTTTTGAAGAGGGTGAACACCTTGTTCAGG CAAGTGGTAAGCTTTTGGTTTTGGATCAATTGCTCAAAAGGCTCCATGATAGTGGCCATCGTGTCCTCCTCTTTTCCCAA ATGACCTCAACACTTGACATTTTGCAGGATTTTATGGAGCTTCGTAGGTATTCGTATGAGCGCCTTGATGGATCAGTACG GGCTGAAGAACGTTTTGCTGCGATAAAGAATTTCAGCGCGAAAACAGAAAGAGGATTGGATTCTGAAGTTGATGGAAGCA ATGCCTTTGTTTTCATGATCTCTACAAGAGCAGGGGGAGTCGGTTTGAATCTTGTTGCTGCTGATACTGTTATATTTTAT GAACAAGACTGGAACCCACAGGTGGATAAACAAGCTTTGCAACGAGCTCATCGAATTGGACAAATCAGTCATGTGCTGTC TATAAACCTCGTTACTGAACATTCTGTGGAAGAGGTTATTTTGAGGAGGGCAGAGAGAAAGTTGCAGCTTAGTCATAATG TTGTGGGAGATAACATGGAAGAGAAAGAAGAAGATGGTGGTGATTTGCGGTCTCTAGTGTTTGGTTTACAAAGGTTTGAT CCCGAGGAGATTCACAATGAAGAGTCTGATAACCTGAAAATGGTAGAAATAAGTTCTCTTGCTGAGAAAGTTGTTGCAAT ACGTCAAAACGTTGAACCAGACAAGGAAGAAAGAAGGTTTGAAATTAATTCGAGCGACACTTTGCTAGGAAATACATCAT CTGCAAGTCTGGATTCCGAGCTTGATGAAGCTTCTTACCTTTCATGGGTTGAGAAATTGAAGGAAGCTGCACGATCAAGC AAGGATGAAAAAATTATTGAGTTGGGAAATAGAAAGAACTTATCTGAGGAAAGAAATCTGAGAATTGAGGCTGCCAGGAA AAAGGCAGAAGAGAAGAAGTTAGCCACGTGGGGAGCACACGGTTATCAGTCTTTGTCCGTGGAAGAACCGATTTTGCCTG ATGATGTTGATTCCAGCTCAGATGCAGGATCTGTTAACTTTGTCTTTGGAGACTGTACAAATCCATCAACTGTCTCTCAT GAGCCAGCAATCATATTCAGCTGTGTTGATGACTCTGGAAACTGGGGACGTGGTGGAATGTTTGATGCTCTGTCAAAACT GTCTAATACTGTACCCACTGCTTATCACCGAGCATCCGAGTTTAAAGACCTTCATCTTGGAGACCTGCATCTCATAAAAA TTGATGACAATGATGACCAACAAAACACACAAGCAAGCAAGCCTCTTTGGGTGGCAGTTGCAGTTACACAATCTTACAAT TCGAGGCGTAAAGTCCCACGTAGTAGCATTTCAATTCCAGACCTTGAAAGTTGCTTAGCCAAAGCTTCATTCTCTGCTTC TCAGAAATCAGCCTCACTCCACATGCCACGTATTGGTTACCAAGACGGATCAGACCGATCTCAATGGTACACTGTTGAGC GTCTTCTTCGAAAATACTCCTCCATCTTCACCGTCAAAATATTCGTGTACTATTATCGTCGATCTCCCTGA |
Microexon DNA seq | GAGACGAG |
Microexon Amino Acid seq | GDE |
Microexon-tag DNA Seq | GTCTCTTGGCTTATACAGAAATATCTACTCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTGGGAAAGACTCTCCAAGCAATCTCTTTCCTGAGTTATTTGAAG |
Microexon-tag Amino Acid seq | VSWLIQKYLLGVNVVLGDEMGLGKTLQAISFLSYLK |
Transcript ID | AT2G44980.3 |
Gene ID | At.11525 |
Gene Name | CHR10 |
Pfam domain motif | SNF2_N |
Motif E-value | 3.5e-49 |
Motif start | 71 |
Motif end | 356 |
Protein seq | >AT2G44980.3 MSKESSPPKVPSTTMEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLGDEMGL GKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPF DVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVF GTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSIL RKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQ MTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFY EQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSLVFGLQRFD PEEIHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEINSSDTLLGNTSSASLDSELDEASYLSWVEKLKEAARSS KDEKIIELGNRKNLSEERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFVFGDCTNPSTVSH EPAIIFSCVDDSGNWGRGGMFDALSKLSNTVPTAYHRASEFKDLHLGDLHLIKIDDNDDQQNTQASKPLWVAVAVTQSYN SRRKVPRSSISIPDLESCLAKASFSASQKSASLHMPRIGYQDGSDRSQWYTVERLLRKYSSIFTVKIFVYYYRRSP* |
CDS seq | >AT2G44980.3 ATGTCAAAAGAGAGTTCACCGCCAAAAGTCCCTTCCACGACGATGGAGTATGAACGGCGACTTGAAGCGGCGGCGGAAAT TATACTCGAGAAGGAGGCGAAATTTAGCAACACACCTCCGGATTGTAGTGAATTTGGGGTCACGGCGACTCTAAAGCCTC ACCAAGTCGAAGGTGTCTCTTGGCTTATACAGAAATATCTACTCGGCGTCAATGTCGTTCTCGGAGACGAGATGGGATTG GGAAAGACTCTCCAAGCAATCTCTTTCCTGAGTTATTTGAAGTTTCGTCAAGGCTTGCCTGGGCCATTTCTGGTGCTATG TCCCTTAAGTGTAACGGATGGTTGGGTATCAGAGATAAATAGGTTCACTCCAAATCTTGAAGTTCTTAGATATGTTGGCG ATAAGTATTGCCGTCTGGATATGCGTAAGTCAATGTATGATCATGTCAAGAAGAGTTCTAAGGGACATTTCTTACCATTT GATGTATTGCTGACAACATATGACATAGCATTGGTGGATCAAGACTTTCTTTCTCAAATTCCTTGGCAATATGCTATAAT TGATGAAGCTCAAAGACTCAAGAATCCTAACAGTGTTCTGTATAATGTCTTACTTGAGCAATTCCTCATTCCACGACGTC TCTTGATTACTGGCACACCTATCCAGAACAATCTTACCGAACTTTGGGCTCTGATGCATTTTTGCATGCCACTAGTTTTT GGGACACTGGACCAGTTCCTTTCCGCATTCAAAGAGACTGGGGACGGTCTATCAGGTCTTGATGTATCTAATGACAAGGA AACATATAAGAGTCTGAAGTTCATCTTAGGTGCCTTTATGCTGAGGCGTACAAAATCTTTGCTCATTGAGTCTGGAAATC TGGTGCTGCCACCTCTCACGGAGCTAACTGTAATGGTTCCGCTCGTCAGTCTTCAAAAGAAGATATATACTTCCATTTTG AGGAAAGAGCTTCCAGGGCTTCTTGAACTGTCTTCTGGAGGATCAAATCATACGTCTTTACAAAATATTGTGATACAGCT AAGAAAAGCATGTAGCCACCCTTACTTATTTCCAGGTATCGAACCAGAGCCTTTTGAAGAGGGTGAACACCTTGTTCAGG CAAGTGGTAAGCTTTTGGTTTTGGATCAATTGCTCAAAAGGCTCCATGATAGTGGCCATCGTGTCCTCCTCTTTTCCCAA ATGACCTCAACACTTGACATTTTGCAGGATTTTATGGAGCTTCGTAGGTATTCGTATGAGCGCCTTGATGGATCAGTACG GGCTGAAGAACGTTTTGCTGCGATAAAGAATTTCAGCGCGAAAACAGAAAGAGGATTGGATTCTGAAGTTGATGGAAGCA ATGCCTTTGTTTTCATGATCTCTACAAGAGCAGGGGGAGTCGGTTTGAATCTTGTTGCTGCTGATACTGTTATATTTTAT GAACAAGACTGGAACCCACAGGTGGATAAACAAGCTTTGCAACGAGCTCATCGAATTGGACAAATCAGTCATGTGCTGTC TATAAACCTCGTTACTGAACATTCTGTGGAAGAGGTTATTTTGAGGAGGGCAGAGAGAAAGTTGCAGCTTAGTCATAATG TTGTGGGAGATAACATGGAAGAGAAAGAAGAAGATGGTGGTGATTTGCGGTCTCTAGTGTTTGGTTTACAAAGGTTTGAT CCCGAGGAGATTCACAATGAAGAGTCTGATAACCTGAAAATGGTAGAAATAAGTTCTCTTGCTGAGAAAGTTGTTGCAAT ACGTCAAAACGTTGAACCAGACAAGGAAGAAAGAAGGTTTGAAATTAATTCGAGCGACACTTTGCTAGGAAATACATCAT CTGCAAGTCTGGATTCCGAGCTTGATGAAGCTTCTTACCTTTCATGGGTTGAGAAATTGAAGGAAGCTGCACGATCAAGC AAGGATGAAAAAATTATTGAGTTGGGAAATAGAAAGAACTTATCTGAGGAAAGAAATCTGAGAATTGAGGCTGCCAGGAA AAAGGCAGAAGAGAAGAAGTTAGCCACGTGGGGAGCACACGGTTATCAGTCTTTGTCCGTGGAAGAACCGATTTTGCCTG ATGATGTTGATTCCAGCTCAGATGCAGGATCTGTTAACTTTGTCTTTGGAGACTGTACAAATCCATCAACTGTCTCTCAT GAGCCAGCAATCATATTCAGCTGTGTTGATGACTCTGGAAACTGGGGACGTGGTGGAATGTTTGATGCTCTGTCAAAACT GTCTAATACTGTACCCACTGCTTATCACCGAGCATCCGAGTTTAAAGACCTTCATCTTGGAGACCTGCATCTCATAAAAA TTGATGACAATGATGACCAACAAAACACACAAGCAAGCAAGCCTCTTTGGGTGGCAGTTGCAGTTACACAATCTTACAAT TCGAGGCGTAAAGTCCCACGTAGTAGCATTTCAATTCCAGACCTTGAAAGTTGCTTAGCCAAAGCTTCATTCTCTGCTTC TCAGAAATCAGCCTCACTCCACATGCCACGTATTGGTTACCAAGACGGATCAGACCGATCTCAATGGTACACTGTTGAGC GTCTTCTTCGAAAATACTCCTCCATCTTCACCGTCAAAATATTCGTGTACTATTATCGTCGATCTCCCTGA |