Microexon ID Zm_7:10853791-10853797:+
Species Zea mays
Coordinates 7:10853791..10853797
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTCAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCGAGACTTTCATTTGCCGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGATGTTGCTTTTGAGCCAGCCAAACTTCTGTGGTTGATCCAGAGG
Microexon-tag Amino Acid Seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Microexon-tag spanning region10853643-10853924
Microexon-tag prediction score0.9563
Overlapped with the annotated transcript (%) 93.52
New Transcript ID Zm00001d018964_T002x
Reference Transcript ID Zm00001d018964_T002
Gene ID Zm00001d018964
Gene Name NA
Zm_7:10853791-10853797:+ does not have available information here.
Microexon DNA seq AGTCAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCGAGACTTTCATTTGCCGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGATGTTGCTTTTGAGCCAGCCAAACTTCTGTGGTTGATCCAGAGG
Microexon-tag Amino Acid seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Transcript ID Zm.29659.1
Gene ID Zm.29659
Gene Name NA
Pfam domain motif GBP
Motif E-value 1.5e-38
Motif start 42
Motif end 282
Protein seq >Zm.29659.1
MGCAPVVWAAVWLLAAAVAGFADPGGLERAFPIVKPDYGHTKLQLAKEGLEAIQRIRTPIAAVSVIGPYRSGKSFLLNQL
LSLSCDNGFGVGHMRDTKTKGIWVWGSPVEVDIGGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETI
READISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALQRVPNNNGDTNIDELNQIRDSLAV
MGDNSTAFSLPQPHLQRTKLCDMEDQELDPLYVKKRDQLKEVVASMIKPKIVQGRTLNGTEFVSFLGQIVDALNKGEIPS
AGSLVEIFNKAILERCLKVYSEIMGRAGLPVSVDELREFHDLAKDEARRLFNKQHFGKHHAARSILKLDEEIKKVYRNLG
QANEYQSSKLCEARFSECEDKMERLQVLKLPSMAKFDAGFLLCNRSFETDCVGPAKESYRHRMSKMLARSRALFIKEYNN
KLFNWLAIFSLAMVVVGRFLVKFFLLEVAAWVMFAFLETYTRLFWSSESLYYNPAWHAIVSSWETVVYSPVLDLDRWAFP
ICAVLLFLAFYWRCLGGRRGIARSLLPLYNGAYYRSSSRTRTD*
CDS seq >Zm.29659.1
ATGGGCTGTGCCCCGGTGGTGTGGGCCGCGGTGTGGTTGCTTGCTGCCGCGGTGGCAGGGTTCGCCGATCCCGGCGGCCT
CGAGCGCGCGTTTCCAATAGTGAAGCCAGACTACGGGCACACGAAACTCCAACTCGCAAAAGAAGGTCTGGAAGCAATTC
AGAGGATCAGAACTCCAATAGCTGCTGTTTCTGTTATTGGCCCCTATCGGTCGGGCAAATCTTTTCTTCTCAACCAACTT
CTCTCCCTATCATGTGACAATGGTTTTGGAGTTGGACACATGCGGGATACAAAAACAAAAGGTATATGGGTATGGGGTTC
CCCCGTTGAGGTGGATATCGGTGGCTCCAAGGTGTCTGTTCTATACCTGGACACCGAAGGATTTGAGAGTGTTGGAAAAT
CAAATGTATATGATGATAGGATATTTGCTCTGGCAACTGTTTTAAGTTCTGTTCTGATCTACAATCTTCCTGAAACAATT
CGTGAAGCCGATATATCGAGACTTTCATTTGCCGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGATGT
TGCTTTTGAGCCAGCCAAACTTCTGTGGTTGATCCAGAGGGATTTTCTCCAAGGAAAATCGGTTCAGCAGATGGTTGATG
AAGCTCTCCAACGGGTACCTAACAACAATGGAGACACAAATATTGACGAGCTCAACCAAATCAGAGACTCTTTGGCGGTT
ATGGGAGATAACAGTACAGCTTTTAGCTTACCACAGCCTCATCTGCAAAGGACAAAGTTATGTGATATGGAGGACCAGGA
ACTTGATCCGTTGTATGTAAAGAAGAGGGATCAGTTGAAAGAAGTCGTTGCATCCATGATAAAACCAAAAATTGTGCAGG
GTAGAACTCTGAATGGAACAGAGTTTGTATCCTTCCTAGGGCAGATAGTTGATGCTTTGAATAAAGGTGAAATTCCATCA
GCCGGGTCGCTGGTTGAAATTTTCAATAAGGCCATTCTTGAACGTTGCTTGAAGGTGTACAGTGAAATAATGGGCAGAGC
AGGTCTACCAGTGTCAGTGGATGAACTTCGGGAGTTCCACGACCTGGCAAAAGATGAAGCTAGAAGGCTTTTCAACAAGC
AGCATTTCGGTAAACATCATGCTGCTCGGTCCATCCTCAAGCTTGATGAAGAGATTAAAAAGGTGTACAGAAACTTGGGC
CAAGCTAACGAGTATCAGTCATCAAAGCTGTGCGAAGCACGGTTCTCAGAGTGCGAAGATAAAATGGAACGACTCCAAGT
CTTGAAGCTTCCGTCCATGGCGAAATTTGATGCCGGATTCCTTCTCTGCAATCGAAGTTTTGAAACGGACTGTGTGGGGC
CAGCCAAGGAAAGCTATCGACACCGGATGTCAAAGATGCTGGCAAGGTCCCGTGCTCTTTTCATCAAGGAGTACAACAAC
AAGCTCTTCAACTGGCTCGCCATATTCTCCCTGGCCATGGTTGTCGTTGGGCGCTTCTTGGTCAAGTTCTTCCTGCTCGA
AGTTGCTGCGTGGGTGATGTTTGCCTTCCTAGAGACATACACGAGGCTGTTCTGGTCGTCGGAGTCCCTGTACTACAACC
CCGCCTGGCACGCGATCGTCTCTTCTTGGGAAACCGTCGTCTACAGCCCCGTTCTTGATCTTGACAGATGGGCGTTCCCG
ATCTGCGCTGTCCTGTTGTTTTTGGCGTTTTATTGGCGTTGCCTCGGTGGAAGGAGGGGAATTGCCCGGTCACTGCTACC
TCTGTACAACGGGGCTTATTACAGAAGCTCCAGTCGCACAAGAACAGACTGA