Microexon ID Zm_5:4374191-4374197:-
Species Zea mays
Coordinates 5:4374191..4374197
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTTTCATTTGCCGTTGAAATTGCTGAAGAGTTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG
Microexon-tag Amino Acid Seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Microexon-tag spanning region4374061-4374350
Microexon-tag prediction score0.9841
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d013075_T001x
Reference Transcript ID Zm00001d013075_T001
Gene ID Zm00001d013075
Gene Name NA
Transcript ID Zm00001d013075_T001
Protein ID Zm00001d013075_P001
Gene ID Zm00001d013075
Gene Name NA
Pfam domain motif GBP
Motif E-value 2.8e-39
Motif start 51
Motif end 297
Protein seq >Zm00001d013075_P001
MWRGRCAPGISVAALALLAVAAAAGAAAGDPDPDDLERAFPIVEPDHRHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS
GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSV
LIYNLPETVREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGDRYINEV
NQIRDSLAVMGNHSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVSFLQQILE
ALNKGEIPSTGSLVEIFNKAILDRCLKVYREKMDSLNLPVPVDELQKLHEMTNGEARILFDKQHFGKHHAAQSALKLEDE
IKEVYRNFLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFTHCNQSFVKDCVGPAKESYERRMSKMLAKSR
ALFIKEYNNKLFNWLATFSLVMVVIGRFVIKFFLLEIVAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWEMIVYSPI
LDLDRWAIPIVIMLSLGVLYWRCFGRRRKRVKGSLLPLYKNSYKNSSRPRSD*
CDS seq >Zm00001d013075_T001
ATGTGGCGGGGGCGGTGTGCCCCGGGGATCAGCGTGGCGGCGCTGGCCCTGCTCGCCGTCGCGGCTGCTGCAGGAGCCGC
CGCGGGGGATCCCGATCCCGACGACCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACAGACACACTAAACTTCGTC
TCTCAGAGCAAGGTCTAGAAGCAATTCGAAGGATCGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCCTATCGATCT
GGAAAATCATTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA
AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCCTTTATCTAGACA
CTGAAGGGTTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGGATATTTGCTTTGGCGACTGTCTTAAGCTCGGTC
CTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGCCGTTGAAATTGCTGAAGAGTT
CTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTCCAAG
GAAAATCTGTTCAACAAATGGTCAATGAAGCCCTCCAACGGGTGCCTAATGATAATGGTGACAGATATATTAATGAGGTC
AATCAAATACGAGATTCTTTGGCAGTTATGGGCAACCACAGCACTGCTTTTAGCTTGCCCCAGCCACATCTTCAAAGAAC
AAAATTATGTGATATGGAGGACAAAGAGCTTGAACCCTTATATGTAAAACGGCGGGAGCAACTAAAGCAGCTTGTTTCGT
CCATTGTAAAACCAAAAATCGTGCAGGGTAGAACTCTAAATGGGAAGGACTTTGTGTCTTTCTTGCAGCAGATTCTTGAG
GCTTTGAATAAAGGCGAAATTCCATCAACTGGATCTCTGGTTGAAATTTTTAACAAAGCCATTCTTGATCGCTGTCTGAA
GGTGTACAGGGAGAAAATGGATAGCTTAAACCTACCAGTGCCGGTAGACGAACTGCAGAAACTTCATGAGATGACAAATG
GTGAAGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCGGCCCTCAAGCTTGAAGATGAG
ATTAAAGAGGTGTACAGAAACTTCCTTCTAGCTAATGAATATCAATCGTCAAAGCTATGTGAAGCTCGCTTTTCTGAGTG
TGAAGATAAGATGGATCACCTTCAAGTCTTGAAACTTCCTTCAATGGCAAAATTCAATGCAGGCTTTACTCACTGCAACC
AAAGTTTCGTAAAGGACTGCGTGGGACCTGCAAAAGAAAGCTACGAACGTAGAATGTCAAAGATGCTTGCCAAGTCTCGT
GCTCTTTTCATCAAGGAGTACAATAACAAGCTTTTCAATTGGTTGGCGACATTCTCTTTGGTCATGGTGGTGATCGGGCG
CTTTGTCATCAAGTTCTTCCTACTTGAAATTGTTGCTTGGGTGATGTTTATCTTCCTAGAGACGTACACGAGAATGTTCT
GGTCAGCGGAATCACTGTATTATAATCCAGCTTGGCACATCATTGTTTCTTCCTGGGAGATGATCGTGTACAGCCCTATT
CTTGATCTGGACAGATGGGCCATCCCAATTGTCATAATGCTATCATTGGGGGTTCTTTACTGGAGGTGCTTCGGCCGCAG
AAGGAAGCGGGTAAAGGGTTCCCTCCTCCCATTGTACAAGAATTCTTACAAGAACTCGAGTCGCCCGAGATCAGATTAG
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTTTCATTTGCCGTTGAAATTGCTGAAGAGTTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG
Microexon-tag Amino Acid seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Transcript ID Zm.21758.2
Gene ID Zm.21758
Gene Name NA
Pfam domain motif GBP
Motif E-value 1.1e-39
Motif start 51
Motif end 297
Protein seq >Zm.21758.2
MWRGRCAPGISVAALALLAVAAAAGAAAGDPDPDDLERAFPIVEPDHRHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS
GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSV
LIYNLPETVREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGDRYINEV
NQIRDSLAVMGNHSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVSFLQQILE
ALNKGEIPSTGSLVEIFNKAILDRCLKVYREKMDSLNLPVPVDELQKLHEMTNGEARILFDKQHFGKHHAAQSALKLEDE
IKEDVLCRCTETSF*
CDS seq >Zm.21758.2
ATGTGGCGGGGGCGGTGTGCCCCGGGGATCAGCGTGGCGGCGCTGGCCCTGCTCGCCGTCGCGGCTGCTGCAGGAGCCGC
CGCGGGGGATCCCGATCCCGACGACCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACAGACACACTAAACTTCGTC
TCTCAGAGCAAGGTCTAGAAGCAATTCGAAGGATCGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCCTATCGATCT
GGAAAATCATTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA
AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCCTTTATCTAGACA
CTGAAGGGTTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGGATATTTGCTTTGGCGACTGTCTTAAGCTCGGTC
CTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGCCGTTGAAATTGCTGAAGAGTT
CTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTCCAAG
GAAAATCTGTTCAACAAATGGTCAATGAAGCCCTCCAACGGGTGCCTAATGATAATGGTGACAGATATATTAATGAGGTC
AATCAAATACGAGATTCTTTGGCAGTTATGGGCAACCACAGCACTGCTTTTAGCTTGCCCCAGCCACATCTTCAAAGAAC
AAAATTATGTGATATGGAGGACAAAGAGCTTGAACCCTTATATGTAAAACGGCGGGAGCAACTAAAGCAGCTTGTTTCGT
CCATTGTAAAACCAAAAATCGTGCAGGGTAGAACTCTAAATGGGAAGGACTTTGTGTCTTTCTTGCAGCAGATTCTTGAG
GCTTTGAATAAAGGCGAAATTCCATCAACTGGATCTCTGGTTGAAATTTTTAACAAAGCCATTCTTGATCGCTGTCTGAA
GGTGTACAGGGAGAAAATGGATAGCTTAAACCTACCAGTGCCGGTAGACGAACTGCAGAAACTTCATGAGATGACAAATG
GTGAAGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCGGCCCTCAAGCTTGAAGATGAG
ATTAAAGAGGATGTACTTTGTAGGTGTACAGAAACTTCCTTCTAG