Microexon ID Zm_1:293285224-293285230:+
Species Zea mays
Coordinates 1:293285224..293285230
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG
Microexon-tag Amino Acid Seq ISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Microexon-tag spanning region293285073-293285360
Microexon-tag prediction score0.9796
Overlapped with the annotated transcript (%) 100
New Transcript ID Zm00001d034446_T002x
Reference Transcript ID Zm00001d034446_T002
Gene ID Zm00001d034446
Gene Name NA
Transcript ID Zm00001d034446_T002
Protein ID Zm00001d034446_P002
Gene ID Zm00001d034446
Gene Name NA
Pfam domain motif GBP
Motif E-value 3e-38
Motif start 51
Motif end 304
Protein seq >Zm00001d034446_P002
MGRGRWASGIRAAALVLLAVAAAAGAAAGDPDPDELERAFPIVEPDHGHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS
GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVIYLDTEGFESVGKSNVYDDRMFSFFGRIFAL
ATVLSSVLIYNLPETVREADISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNG
DKYIDEVNQIRDSLAVMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVS
FLQQILEALNKGEIPSTGSLVEIFNKAILDRCLKAYREKMDGLGLPVPVDKLQKLHEMANGDARILFDKQHFGKHHAAQS
ALKLEDDIKKVYRNLLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFTHCNQSFVKECVGPAKESYERRMS
KVCLLILNTVVMSVTKVWKEGTRAVVILCIDIFYGIAISTQMLAKSRALFIKEYNNKLFNWLVTFSLVMVVIGRFVIKFF
LLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPILDLDRWAVPIVIMLLFGVLYWRCFGGRRKRGRG
SLLPLYKNSYNSSRRSRSD*
CDS seq >Zm00001d034446_T002
ATGGGGCGCGGGCGGTGGGCCTCGGGGATCCGCGCGGCGGCGCTGGTCCTGCTCGCGGTCGCGGCTGCCGCCGGAGCCGC
CGCGGGGGATCCTGATCCCGACGAGCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACGGGCACACAAAACTTCGTC
TCTCAGAACAAGGTCTAGAAGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCATATCGATCT
GGAAAATCTTTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA
AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCATTTATCTAGACA
CTGAAGGATTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGAATGTTCTCTTTCTTTGGTAGGATATTTGCTTTG
GCAACTGTCCTAAGTTCGGTGCTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGC
CATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTA
TCCAGAGGGATTTCCTCCAAGGAAAATCTGTTCAACAAATGGTCAATGAAGCCCTTCAACGGGTGCCTAATGATAATGGT
GACAAATATATTGATGAGGTCAATCAAATACGAGATTCGTTGGCAGTTATGGGGAACAACAGCACTGCTTTTAGCTTGCC
TCAGCCGCATCTTCAAAGAACAAAATTATGTGATATGGAGGACAAAGAACTTGAACCCTTATATGTAAAACGGCGGGAGC
AATTAAAGCAGCTTGTTTCGTCTATTGTAAAACCAAAAATTGTGCAGGGCAGAACTCTAAATGGGAAGGACTTTGTGTCT
TTCTTGCAGCAGATTCTTGAGGCTTTGAATAAAGGCGAAATTCCATCAACAGGGTCTCTAGTTGAAATTTTTAACAAAGC
CATTCTTGATCGCTGTCTGAAGGCGTACAGGGAGAAAATGGATGGCTTAGGCTTACCAGTACCGGTAGACAAACTGCAGA
AACTTCATGAGATGGCAAATGGTGATGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCA
GCTCTCAAGCTTGAAGATGATATTAAAAAGGTGTACAGAAACTTACTTCTAGCTAATGAATATCAATCGTCAAAGCTGTG
TGAAGCTCGCTTTTCTGAGTGTGAAGATAAGATGGATCACCTTCAAGTCTTGAAACTTCCTTCGATGGCAAAATTCAATG
CAGGCTTTACTCACTGCAACCAAAGTTTCGTAAAGGAATGCGTTGGACCTGCAAAAGAAAGCTATGAACGTAGAATGTCA
AAGGTTTGCCTGTTAATTCTGAATACAGTTGTCATGTCAGTTACCAAAGTGTGGAAGGAGGGAACCCGTGCTGTAGTTAT
CCTGTGCATTGATATCTTCTATGGTATTGCGATTTCTACTCAAATGCTTGCCAAGTCTCGTGCTCTTTTCATCAAGGAGT
ACAATAACAAGCTTTTCAATTGGTTGGTGACCTTCTCTTTGGTCATGGTGGTCATCGGGCGCTTTGTCATCAAGTTCTTC
CTACTTGAAATCGCCGCTTGGGTGATGTTCATCTTCCTAGAGACGTACACGAGAATGTTCTGGTCAGCGGAATCGCTGTA
CTATAATCCAGCTTGGCACATCATTGTTTCTTCCTGGGAAACCATCGTGTACAGCCCAATTCTTGATCTGGACAGATGGG
CCGTCCCAATTGTCATAATGCTATTATTTGGGGTTCTTTACTGGAGATGCTTCGGTGGTAGAAGGAAGCGGGGAAGGGGT
TCGCTCCTCCCATTGTACAAGAATTCTTATAACTCGAGTCGTCGCTCGAGATCAGACTAG
Microexon DNA seq AGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG
Microexon-tag Amino Acid seq ISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Transcript ID Zm.5438.1
Gene ID Zm.5438
Gene Name NA
Pfam domain motif GBP
Motif E-value 1e-39
Motif start 51
Motif end 297
Protein seq >Zm.5438.1
MGRGRWASGIRAAALVLLAVAAAAGAAAGDPDPDELERAFPIVEPDHGHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS
GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVIYLDTEGFESVGKSNVYDDRIFALATVLSSV
LIYNLPETVREADISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGDKYIDEV
NQIRDSLAVMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVSFLQQILE
ALNKGEIPSTGSLVEIFNKAILDRCLKAYREKMDGLGLPVPVDKLQKLHEMANGDARILFDKQHFGKHHAAQSALKLEDD
IKKVYRNLLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFTHCNQSFVKECVGPAKESYERRMSKMLAKSR
ALFIKEYNNKLFNWLVTFSLVMVVIGRFVIKFFLLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPI
LDLDRWAVPIVIMLLFGVLYWRCFGGRRKRGRGSLLPLYKNSYNSSRRSRSD*
CDS seq >Zm.5438.1
ATGGGGCGCGGGCGGTGGGCCTCGGGGATCCGCGCGGCGGCGCTGGTCCTGCTCGCGGTCGCGGCTGCCGCCGGAGCCGC
CGCGGGGGATCCTGATCCCGACGAGCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACGGGCACACAAAACTTCGTC
TCTCAGAACAAGGTCTAGAAGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCATATCGATCT
GGAAAATCTTTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA
AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCATTTATCTAGACA
CTGAAGGATTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGGATATTTGCTTTGGCAACTGTCCTAAGTTCGGTG
CTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATT
CTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTCCAAG
GAAAATCTGTTCAACAAATGGTCAATGAAGCCCTTCAACGGGTGCCTAATGATAATGGTGACAAATATATTGATGAGGTC
AATCAAATACGAGATTCGTTGGCAGTTATGGGGAACAACAGCACTGCTTTTAGCTTGCCTCAGCCGCATCTTCAAAGAAC
AAAATTATGTGATATGGAGGACAAAGAACTTGAACCCTTATATGTAAAACGGCGGGAGCAATTAAAGCAGCTTGTTTCGT
CTATTGTAAAACCAAAAATTGTGCAGGGCAGAACTCTAAATGGGAAGGACTTTGTGTCTTTCTTGCAGCAGATTCTTGAG
GCTTTGAATAAAGGCGAAATTCCATCAACAGGGTCTCTAGTTGAAATTTTTAACAAAGCCATTCTTGATCGCTGTCTGAA
GGCGTACAGGGAGAAAATGGATGGCTTAGGCTTACCAGTACCGGTAGACAAACTGCAGAAACTTCATGAGATGGCAAATG
GTGATGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCAGCTCTCAAGCTTGAAGATGAT
ATTAAAAAGGTGTACAGAAACTTACTTCTAGCTAATGAATATCAATCGTCAAAGCTGTGTGAAGCTCGCTTTTCTGAGTG
TGAAGATAAGATGGATCACCTTCAAGTCTTGAAACTTCCTTCGATGGCAAAATTCAATGCAGGCTTTACTCACTGCAACC
AAAGTTTCGTAAAGGAATGCGTTGGACCTGCAAAAGAAAGCTATGAACGTAGAATGTCAAAGATGCTTGCCAAGTCTCGT
GCTCTTTTCATCAAGGAGTACAATAACAAGCTTTTCAATTGGTTGGTGACCTTCTCTTTGGTCATGGTGGTCATCGGGCG
CTTTGTCATCAAGTTCTTCCTACTTGAAATCGCCGCTTGGGTGATGTTCATCTTCCTAGAGACGTACACGAGAATGTTCT
GGTCAGCGGAATCGCTGTACTATAATCCAGCTTGGCACATCATTGTTTCTTCCTGGGAAACCATCGTGTACAGCCCAATT
CTTGATCTGGACAGATGGGCCGTCCCAATTGTCATAATGCTATTATTTGGGGTTCTTTACTGGAGATGCTTCGGTGGTAG
AAGGAAGCGGGGAAGGGGTTCGCTCCTCCCATTGTACAAGAATTCTTATAACTCGAGTCGTCGCTCGAGATCAGACTAG