
Microexon ID | Zm_1:293285224-293285230:+ |
Species | Zea mays | Coordinates | 1:293285224..293285230 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 293285073-293285360 |
Microexon-tag prediction score | 0.9796 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Zm00001d034446_T002x |
Reference Transcript ID | Zm00001d034446_T002 |
Gene ID | Zm00001d034446 |
Gene Name | NA |
Transcript ID | Zm00001d034446_T002 |
Protein ID | Zm00001d034446_P002 |
Gene ID | Zm00001d034446 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 3e-38 |
Motif start | 51 |
Motif end | 304 |
Protein seq | >Zm00001d034446_P002 MGRGRWASGIRAAALVLLAVAAAAGAAAGDPDPDELERAFPIVEPDHGHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVIYLDTEGFESVGKSNVYDDRMFSFFGRIFAL ATVLSSVLIYNLPETVREADISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNG DKYIDEVNQIRDSLAVMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVS FLQQILEALNKGEIPSTGSLVEIFNKAILDRCLKAYREKMDGLGLPVPVDKLQKLHEMANGDARILFDKQHFGKHHAAQS ALKLEDDIKKVYRNLLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFTHCNQSFVKECVGPAKESYERRMS KVCLLILNTVVMSVTKVWKEGTRAVVILCIDIFYGIAISTQMLAKSRALFIKEYNNKLFNWLVTFSLVMVVIGRFVIKFF LLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPILDLDRWAVPIVIMLLFGVLYWRCFGGRRKRGRG SLLPLYKNSYNSSRRSRSD* |
CDS seq | >Zm00001d034446_T002 ATGGGGCGCGGGCGGTGGGCCTCGGGGATCCGCGCGGCGGCGCTGGTCCTGCTCGCGGTCGCGGCTGCCGCCGGAGCCGC CGCGGGGGATCCTGATCCCGACGAGCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACGGGCACACAAAACTTCGTC TCTCAGAACAAGGTCTAGAAGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCATATCGATCT GGAAAATCTTTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCATTTATCTAGACA CTGAAGGATTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGAATGTTCTCTTTCTTTGGTAGGATATTTGCTTTG GCAACTGTCCTAAGTTCGGTGCTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGC CATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTA TCCAGAGGGATTTCCTCCAAGGAAAATCTGTTCAACAAATGGTCAATGAAGCCCTTCAACGGGTGCCTAATGATAATGGT GACAAATATATTGATGAGGTCAATCAAATACGAGATTCGTTGGCAGTTATGGGGAACAACAGCACTGCTTTTAGCTTGCC TCAGCCGCATCTTCAAAGAACAAAATTATGTGATATGGAGGACAAAGAACTTGAACCCTTATATGTAAAACGGCGGGAGC AATTAAAGCAGCTTGTTTCGTCTATTGTAAAACCAAAAATTGTGCAGGGCAGAACTCTAAATGGGAAGGACTTTGTGTCT TTCTTGCAGCAGATTCTTGAGGCTTTGAATAAAGGCGAAATTCCATCAACAGGGTCTCTAGTTGAAATTTTTAACAAAGC CATTCTTGATCGCTGTCTGAAGGCGTACAGGGAGAAAATGGATGGCTTAGGCTTACCAGTACCGGTAGACAAACTGCAGA AACTTCATGAGATGGCAAATGGTGATGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCA GCTCTCAAGCTTGAAGATGATATTAAAAAGGTGTACAGAAACTTACTTCTAGCTAATGAATATCAATCGTCAAAGCTGTG TGAAGCTCGCTTTTCTGAGTGTGAAGATAAGATGGATCACCTTCAAGTCTTGAAACTTCCTTCGATGGCAAAATTCAATG CAGGCTTTACTCACTGCAACCAAAGTTTCGTAAAGGAATGCGTTGGACCTGCAAAAGAAAGCTATGAACGTAGAATGTCA AAGGTTTGCCTGTTAATTCTGAATACAGTTGTCATGTCAGTTACCAAAGTGTGGAAGGAGGGAACCCGTGCTGTAGTTAT CCTGTGCATTGATATCTTCTATGGTATTGCGATTTCTACTCAAATGCTTGCCAAGTCTCGTGCTCTTTTCATCAAGGAGT ACAATAACAAGCTTTTCAATTGGTTGGTGACCTTCTCTTTGGTCATGGTGGTCATCGGGCGCTTTGTCATCAAGTTCTTC CTACTTGAAATCGCCGCTTGGGTGATGTTCATCTTCCTAGAGACGTACACGAGAATGTTCTGGTCAGCGGAATCGCTGTA CTATAATCCAGCTTGGCACATCATTGTTTCTTCCTGGGAAACCATCGTGTACAGCCCAATTCTTGATCTGGACAGATGGG CCGTCCCAATTGTCATAATGCTATTATTTGGGGTTCTTTACTGGAGATGCTTCGGTGGTAGAAGGAAGCGGGGAAGGGGT TCGCTCCTCCCATTGTACAAGAATTCTTATAACTCGAGTCGTCGCTCGAGATCAGACTAG |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATTCTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG |
Microexon-tag Amino Acid seq | ISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQR |
Transcript ID | Zm.5438.1 |
Gene ID | Zm.5438 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 1e-39 |
Motif start | 51 |
Motif end | 297 |
Protein seq | >Zm.5438.1 MGRGRWASGIRAAALVLLAVAAAAGAAAGDPDPDELERAFPIVEPDHGHTKLRLSEQGLEAIRRIETPIAVVGVIGPYRS GKSFLLNQLLSLSCDKGFGVGHMRDTKTKGIWIWGTPVEMDVDGSKVSVIYLDTEGFESVGKSNVYDDRIFALATVLSSV LIYNLPETVREADISRLSFAIEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGDKYIDEV NQIRDSLAVMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVKRREQLKQLVSSIVKPKIVQGRTLNGKDFVSFLQQILE ALNKGEIPSTGSLVEIFNKAILDRCLKAYREKMDGLGLPVPVDKLQKLHEMANGDARILFDKQHFGKHHAAQSALKLEDD IKKVYRNLLLANEYQSSKLCEARFSECEDKMDHLQVLKLPSMAKFNAGFTHCNQSFVKECVGPAKESYERRMSKMLAKSR ALFIKEYNNKLFNWLVTFSLVMVVIGRFVIKFFLLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPI LDLDRWAVPIVIMLLFGVLYWRCFGGRRKRGRGSLLPLYKNSYNSSRRSRSD* |
CDS seq | >Zm.5438.1 ATGGGGCGCGGGCGGTGGGCCTCGGGGATCCGCGCGGCGGCGCTGGTCCTGCTCGCGGTCGCGGCTGCCGCCGGAGCCGC CGCGGGGGATCCTGATCCCGACGAGCTCGAGCGCGCGTTTCCAATAGTGGAGCCAGACCACGGGCACACAAAACTTCGTC TCTCAGAACAAGGTCTAGAAGCAATTCGAAGGATTGAAACTCCTATTGCTGTTGTTGGTGTCATTGGTCCATATCGATCT GGAAAATCTTTTCTCCTCAACCAGCTTCTCTCCTTATCTTGTGATAAAGGTTTTGGAGTTGGTCATATGCGAGATACTAA AACTAAAGGTATTTGGATTTGGGGTACTCCTGTTGAGATGGATGTTGATGGTTCCAAAGTTTCTGTCATTTATCTAGACA CTGAAGGATTTGAAAGTGTTGGGAAATCAAATGTGTATGATGATAGGATATTTGCTTTGGCAACTGTCCTAAGTTCGGTG CTTATCTACAACCTTCCTGAGACGGTACGTGAAGCTGATATATCTAGGCTTTCATTTGCCATTGAAATTGCTGAAGAATT CTATGGAAGAGTGAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTCCAAG GAAAATCTGTTCAACAAATGGTCAATGAAGCCCTTCAACGGGTGCCTAATGATAATGGTGACAAATATATTGATGAGGTC AATCAAATACGAGATTCGTTGGCAGTTATGGGGAACAACAGCACTGCTTTTAGCTTGCCTCAGCCGCATCTTCAAAGAAC AAAATTATGTGATATGGAGGACAAAGAACTTGAACCCTTATATGTAAAACGGCGGGAGCAATTAAAGCAGCTTGTTTCGT CTATTGTAAAACCAAAAATTGTGCAGGGCAGAACTCTAAATGGGAAGGACTTTGTGTCTTTCTTGCAGCAGATTCTTGAG GCTTTGAATAAAGGCGAAATTCCATCAACAGGGTCTCTAGTTGAAATTTTTAACAAAGCCATTCTTGATCGCTGTCTGAA GGCGTACAGGGAGAAAATGGATGGCTTAGGCTTACCAGTACCGGTAGACAAACTGCAGAAACTTCATGAGATGGCAAATG GTGATGCTAGAATTCTCTTTGATAAGCAGCACTTTGGCAAACATCATGCTGCTCAGTCAGCTCTCAAGCTTGAAGATGAT ATTAAAAAGGTGTACAGAAACTTACTTCTAGCTAATGAATATCAATCGTCAAAGCTGTGTGAAGCTCGCTTTTCTGAGTG TGAAGATAAGATGGATCACCTTCAAGTCTTGAAACTTCCTTCGATGGCAAAATTCAATGCAGGCTTTACTCACTGCAACC AAAGTTTCGTAAAGGAATGCGTTGGACCTGCAAAAGAAAGCTATGAACGTAGAATGTCAAAGATGCTTGCCAAGTCTCGT GCTCTTTTCATCAAGGAGTACAATAACAAGCTTTTCAATTGGTTGGTGACCTTCTCTTTGGTCATGGTGGTCATCGGGCG CTTTGTCATCAAGTTCTTCCTACTTGAAATCGCCGCTTGGGTGATGTTCATCTTCCTAGAGACGTACACGAGAATGTTCT GGTCAGCGGAATCGCTGTACTATAATCCAGCTTGGCACATCATTGTTTCTTCCTGGGAAACCATCGTGTACAGCCCAATT CTTGATCTGGACAGATGGGCCGTCCCAATTGTCATAATGCTATTATTTGGGGTTCTTTACTGGAGATGCTTCGGTGGTAG AAGGAAGCGGGGAAGGGGTTCGCTCCTCCCATTGTACAAGAATTCTTATAACTCGAGTCGTCGCTCGAGATCAGACTAG |