
Microexon ID | Vv_7:72431-72437:+ |
Species | Vistis vinifera | Coordinates | 7:72431..72437 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATTTCTCGATTATCATTTGCTGTTGAGCTTGCTGAAGAATTCTATGGAAGAGTGAAGGGACAAGATGTTGCCTTTGAACCTGCTAAGCTTCTGTGGCTTATCCAACGT |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 72242-72619 |
Microexon-tag prediction score | 0.9767 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | VIT_07s0141g00110.t01x |
Reference Transcript ID | VIT_07s0141g00110.t01 |
Gene ID | VIT_07s0141g00110 |
Gene Name | NA |
Transcript ID | VIT_07s0141g00110.t01 |
Protein ID | VIT_07s0141g00110.t01 |
Gene ID | VIT_07s0141g00110 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 1.3e-38 |
Motif start | 42 |
Motif end | 282 |
Protein seq | >VIT_07s0141g00110.t01 MEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEAIERITTPIAAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPIEMDIDGVKSSVLYLDTEGFESIGKSNVYDDRIFALATILSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRHVPNYDGDKNIEQVNQIRDSLAI MGDNSTAFSLPQPHLQRTRLCDMKDGELDPAYVQKRDQLKEVVASIIRPKIVQGKPLNGKEFVSFMEQILEALNKGEIPS TGSLVEVFNKGILERCLKLYSERMGKVALPLSEKYLLEAHEGSRGEAMNVFDEQHFGRYHAKKSVTTLDEEIQKIYKNFI LANEYQSSKLCEALYTRCEDKMDQLQVLRLPSMAKFNAGFLHCNQSFGKECVGPSKTNYEQRMTKMMQKSRSLFIKEYNH RLFNWLVAFSLFMVVVGRFVIKFILLEIGAWILFIFLETYTRMFWSAESLYYNPVWHFIVATWETLVYSPILDLDRWAIP ICVLVAILVLYWRCYGRRKHGSRGLLPLYNNHKGGSNRRRSD* |
CDS seq | >VIT_07s0141g00110.t01 ATGGAGATTTCGTATTGGGTCTTGGCGTTCTGGATCTTTCTTTGCCTTTTCGCATCTGGGTCTTCTTCGATTGAGAATTT TCGTCAAGCGTTTCCTATTGTGGAACCTGATCCTGGTCACACAAAACTTCGTCTTGCAAGGGAGGGCTTGGAGGCAATTG AGAGAATAACAACTCCGATTGCAGCTGTTGCTGTAATTGGTCCATACCGCTCTGGAAAATCTTTTTTGCTCAATCAACTT CTCTCCCTTTCTTGTTATGAAGGATTTGGCGTGGGGCACATGCGTGACACCAAAACAAAAGGGATATGGGTGTGGGGAAC CCCTATAGAAATGGATATTGATGGAGTAAAGAGTTCTGTGCTTTACTTAGATACAGAGGGATTTGAAAGTATTGGCAAGT CAAATGTATATGATGACCGTATTTTTGCTCTAGCGACCATTTTGAGTTCTGTGCTTATTTATAACCTGCCTGAGACGATT CGTGAAGCCGACATTTCTCGATTATCATTTGCTGTTGAGCTTGCTGAAGAATTCTATGGAAGAGTGAAGGGACAAGATGT TGCCTTTGAACCTGCTAAGCTTCTGTGGCTTATCCAACGTGATTTTCTACAAGGGAAATCTGTGCAAGAAATGGTGAATG AAGCTCTGCGACATGTTCCTAATTATGATGGGGACAAAAACATTGAGCAGGTTAACCAGATTCGGGACTCTTTGGCTATT ATGGGTGATAATAGTACAGCCTTTAGCTTACCACAACCTCATCTACAGCGGACAAGGCTTTGTGATATGAAGGATGGTGA ACTTGACCCCGCATATGTTCAGAAGAGGGACCAATTGAAAGAAGTTGTTGCTAGCATTATACGTCCAAAGATTGTGCAGG GTAAACCTCTAAATGGAAAGGAGTTTGTCTCTTTTATGGAGCAGATACTTGAAGCCTTGAATAAAGGGGAGATTCCTTCA ACAGGCTCTCTTGTGGAGGTTTTTAATAAGGGTATTCTTGAACGGTGTTTGAAGCTATATAGTGAAAGGATGGGTAAAGT GGCATTACCTCTCTCAGAGAAATATCTTCTAGAGGCCCACGAAGGATCTCGAGGTGAAGCAATGAATGTTTTTGATGAGC AACATTTTGGTCGTTACCATGCTAAGAAATCAGTCACAACACTTGACGAAGAAATACAGAAGATATATAAAAACTTCATT CTAGCAAATGAATACCAATCGTCGAAGCTGTGTGAGGCATTGTATACTAGATGCGAGGACAAAATGGACCAGCTTCAAGT CCTTAGACTTCCTTCCATGGCAAAATTTAATGCTGGGTTCCTTCACTGCAACCAAAGTTTCGGAAAGGAGTGTGTTGGAC CTTCAAAGACCAACTATGAGCAGCGAATGACAAAGATGATGCAGAAGTCTCGATCTCTATTTATTAAGGAGTATAACCAC AGGCTCTTCAATTGGCTGGTGGCCTTCTCCCTCTTCATGGTGGTGGTGGGCCGGTTTGTCATAAAATTTATTTTGCTTGA AATTGGGGCATGGATTCTTTTTATCTTCTTGGAGACATACACAAGGATGTTTTGGTCAGCAGAGTCTCTTTACTACAACC CAGTTTGGCATTTTATTGTAGCGACTTGGGAAACCCTTGTTTACAGCCCTATCCTTGATCTGGACAGATGGGCCATTCCC ATTTGTGTGTTAGTGGCAATATTAGTACTTTACTGGCGGTGTTATGGGAGGAGAAAACATGGGTCGCGAGGACTACTACC TCTATACAACAACCATAAAGGTGGCTCAAATCGGCGGAGATCAGACTAA |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATTTCTCGATTATCATTTGCTGTTGAGCTTGCTGAAGAATTCTATGGAAGAGTGAAGGGACAAGATGTTGCCTTTGAACCTGCTAAGCTTCTGTGGCTTATCCAACGT |
Microexon-tag Amino Acid seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
Transcript ID | VIT_07s0141g00110.t01 |
Gene ID | Vv.27963 |
Gene Name | NA |
Pfam domain motif | GBP |
Motif E-value | 1.3e-38 |
Motif start | 42 |
Motif end | 282 |
Protein seq | >VIT_07s0141g00110.t01 MEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEAIERITTPIAAVAVIGPYRSGKSFLLNQL LSLSCYEGFGVGHMRDTKTKGIWVWGTPIEMDIDGVKSSVLYLDTEGFESIGKSNVYDDRIFALATILSSVLIYNLPETI READISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALRHVPNYDGDKNIEQVNQIRDSLAI MGDNSTAFSLPQPHLQRTRLCDMKDGELDPAYVQKRDQLKEVVASIIRPKIVQGKPLNGKEFVSFMEQILEALNKGEIPS TGSLVEVFNKGILERCLKLYSERMGKVALPLSEKYLLEAHEGSRGEAMNVFDEQHFGRYHAKKSVTTLDEEIQKIYKNFI LANEYQSSKLCEALYTRCEDKMDQLQVLRLPSMAKFNAGFLHCNQSFGKECVGPSKTNYEQRMTKMMQKSRSLFIKEYNH RLFNWLVAFSLFMVVVGRFVIKFILLEIGAWILFIFLETYTRMFWSAESLYYNPVWHFIVATWETLVYSPILDLDRWAIP ICVLVAILVLYWRCYGRRKHGSRGLLPLYNNHKGGSNRRRSD* |
CDS seq | >VIT_07s0141g00110.t01 ATGGAGATTTCGTATTGGGTCTTGGCGTTCTGGATCTTTCTTTGCCTTTTCGCATCTGGGTCTTCTTCGATTGAGAATTT TCGTCAAGCGTTTCCTATTGTGGAACCTGATCCTGGTCACACAAAACTTCGTCTTGCAAGGGAGGGCTTGGAGGCAATTG AGAGAATAACAACTCCGATTGCAGCTGTTGCTGTAATTGGTCCATACCGCTCTGGAAAATCTTTTTTGCTCAATCAACTT CTCTCCCTTTCTTGTTATGAAGGATTTGGCGTGGGGCACATGCGTGACACCAAAACAAAAGGGATATGGGTGTGGGGAAC CCCTATAGAAATGGATATTGATGGAGTAAAGAGTTCTGTGCTTTACTTAGATACAGAGGGATTTGAAAGTATTGGCAAGT CAAATGTATATGATGACCGTATTTTTGCTCTAGCGACCATTTTGAGTTCTGTGCTTATTTATAACCTGCCTGAGACGATT CGTGAAGCCGACATTTCTCGATTATCATTTGCTGTTGAGCTTGCTGAAGAATTCTATGGAAGAGTGAAGGGACAAGATGT TGCCTTTGAACCTGCTAAGCTTCTGTGGCTTATCCAACGTGATTTTCTACAAGGGAAATCTGTGCAAGAAATGGTGAATG AAGCTCTGCGACATGTTCCTAATTATGATGGGGACAAAAACATTGAGCAGGTTAACCAGATTCGGGACTCTTTGGCTATT ATGGGTGATAATAGTACAGCCTTTAGCTTACCACAACCTCATCTACAGCGGACAAGGCTTTGTGATATGAAGGATGGTGA ACTTGACCCCGCATATGTTCAGAAGAGGGACCAATTGAAAGAAGTTGTTGCTAGCATTATACGTCCAAAGATTGTGCAGG GTAAACCTCTAAATGGAAAGGAGTTTGTCTCTTTTATGGAGCAGATACTTGAAGCCTTGAATAAAGGGGAGATTCCTTCA ACAGGCTCTCTTGTGGAGGTTTTTAATAAGGGTATTCTTGAACGGTGTTTGAAGCTATATAGTGAAAGGATGGGTAAAGT GGCATTACCTCTCTCAGAGAAATATCTTCTAGAGGCCCACGAAGGATCTCGAGGTGAAGCAATGAATGTTTTTGATGAGC AACATTTTGGTCGTTACCATGCTAAGAAATCAGTCACAACACTTGACGAAGAAATACAGAAGATATATAAAAACTTCATT CTAGCAAATGAATACCAATCGTCGAAGCTGTGTGAGGCATTGTATACTAGATGCGAGGACAAAATGGACCAGCTTCAAGT CCTTAGACTTCCTTCCATGGCAAAATTTAATGCTGGGTTCCTTCACTGCAACCAAAGTTTCGGAAAGGAGTGTGTTGGAC CTTCAAAGACCAACTATGAGCAGCGAATGACAAAGATGATGCAGAAGTCTCGATCTCTATTTATTAAGGAGTATAACCAC AGGCTCTTCAATTGGCTGGTGGCCTTCTCCCTCTTCATGGTGGTGGTGGGCCGGTTTGTCATAAAATTTATTTTGCTTGA AATTGGGGCATGGATTCTTTTTATCTTCTTGGAGACATACACAAGGATGTTTTGGTCAGCAGAGTCTCTTTACTACAACC CAGTTTGGCATTTTATTGTAGCGACTTGGGAAACCCTTGTTTACAGCCCTATCCTTGATCTGGACAGATGGGCCATTCCC ATTTGTGTGTTAGTGGCAATATTAGTACTTTACTGGCGGTGTTATGGGAGGAGAAAACATGGGTCGCGAGGACTACTACC TCTATACAACAACCATAAAGGTGGCTCAAATCGGCGGAGATCAGACTAA |