
Microexon ID | Ta_5D:509548014-509548020:+ |
Species | Triticum Aestivum | Coordinates | 5D:509548014..509548020 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | GGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCCAGACTCTCATTCGCTGTTGAACTTGCTGAGGAATTCTACGGAAGGGTGAAGGGCCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGCTGATACAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 509547858-509548155 |
Microexon-tag prediction score | 0.9492 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G467800.1x |
Reference Transcript ID | TraesCS5D02G467800.1 |
Gene ID | TraesCS5D02G467800 |
Gene Name | NA |
Transcript ID | TraesCS5D02G467800.1 |
Protein ID | |
Gene ID | TraesCS5D02G467800 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 6.30E-37 |
Motif start | 55 |
Motif end | 299 |
Protein seq | >TraesCS5D02G467800.1 MGGGRDGGYACRGGRGIRCGSAGASVSTEFPRSRFTFAMRLYAFPIVEPDYGHTKLRLSKQGLEAIQRIKTPIAAVSVIG PYRSGKSFLLNQLLSLSCDKGFGVGHMRETKTKGIWIWGTPVEVDVDGSKVSVLYLDTEGFESIGKSNVYDDRIFALAAV LSSLLVYNLPETIREADISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLEGKSVQQMVDEALQRVPNSNGDKY IDEVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLEDQELEPLYVQRRDELKQLVASMIKPKIVQGRTLNGKEFVSFLG QILEALNKGEIPSTGSLVEVFNKGILERCLKVYTERMEIVGLPVSVDKLQLVHGLAEDEARKLFDKQHFGKHYAAQSFLN LDEEIKKVLRSYGLANEYQSSKLCEAKFSECEEKMDHLQALKLPSMAKFNAGFLRCNQSFEMECVGPAKGSYEHRMSKML ARSRALFIREYNNKLFNWLVIFSLTMVVIGRFVVKLLLLEAAAWVMFIFLETYTRLFWSSKSLYYNPVWHAIVSSWEAIV YSPVLDLDRWAIPIVVMMSFLAVYWRCIGARGRIGRSVLPLYNGSFRSSSGRPRTD* |
CDS seq | >TraesCS5D02G467800.1 ATGGGCGGCGGCCGCGATGGTGGCTATGCTTGCCGCGGCGGTAGGGGAATCCGATGCGGGTCAGCTGGAGCGAGCGTAAG TACAGAATTTCCTCGCTCACGTTTCACGTTTGCTATGCGCCTTTATGCGTTTCCGATTGTGGAGCCGGATTATGGCCACA CCAAACTCCGTCTTTCTAAACAAGGCCTGGAGGCAATCCAAAGGATCAAGACTCCAATAGCTGCTGTTTCTGTCATTGGT CCATATCGATCAGGAAAATCTTTCCTTCTCAACCAGCTTCTCTCCTTATCATGTGATAAAGGTTTTGGAGTTGGACACAT GCGAGAAACCAAAACCAAAGGTATATGGATTTGGGGCACTCCCGTTGAGGTCGATGTCGACGGCTCCAAAGTGTCTGTCC TTTACCTGGACACTGAAGGATTTGAGAGCATTGGAAAATCCAATGTATATGATGATAGGATATTTGCTCTGGCAGCTGTC CTGAGTTCTCTTCTTGTCTACAATCTCCCTGAAACGATTCGTGAAGCTGACATATCCAGACTCTCATTCGCTGTTGAACT TGCTGAGGAATTCTACGGAAGGGTGAAGGGCCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGCTGATACAGAGGG ATTTCCTTGAAGGAAAATCTGTACAACAGATGGTTGACGAAGCTCTCCAACGGGTGCCTAACAGCAATGGAGACAAATAT ATTGACGAGGTCAACCAAATCAGAGACTCGTTGGCAATTATGGGTGATAACAGTACTGCTTTTAGCTTGCCCCAGCCTCA TCTCCAAAGAACAAAGTTATGTGATCTGGAGGACCAGGAACTTGAACCGTTGTATGTACAAAGGAGGGATGAACTGAAGC AATTGGTTGCATCCATGATAAAACCAAAAATTGTGCAGGGTAGAACTTTAAATGGAAAGGAGTTTGTATCCTTCTTAGGG CAGATACTTGAAGCTTTGAATAAAGGCGAAATTCCATCGACAGGGTCGCTTGTTGAAGTTTTCAATAAGGGCATCCTTGA ACGTTGCTTGAAGGTGTATACTGAAAGAATGGAAATAGTGGGTCTACCGGTATCAGTTGATAAACTTCAGCTAGTTCATG GGTTGGCAGAAGATGAAGCTAGAAAGCTTTTTGACAAGCAACATTTTGGTAAACATTATGCTGCTCAGTCCTTCCTCAAT CTTGATGAAGAAATAAAAAAGGTGTTGAGAAGCTATGGATTAGCCAATGAGTATCAGTCATCAAAGCTGTGTGAAGCAAA GTTCTCAGAGTGTGAAGAAAAAATGGATCACCTTCAAGCCTTGAAGCTTCCTTCCATGGCAAAATTCAATGCAGGATTTC TCCGCTGCAATCAAAGTTTCGAAATGGAGTGTGTGGGGCCTGCCAAGGGTAGCTATGAGCATCGAATGTCAAAGATGCTC GCAAGGTCCCGTGCTCTGTTCATCAGGGAGTACAACAACAAACTCTTCAACTGGCTGGTGATCTTCTCCCTAACCATGGT GGTGATCGGGCGGTTCGTCGTAAAGCTTCTTCTACTTGAAGCCGCTGCATGGGTGATGTTCATCTTCCTGGAGACGTACA CGAGGTTGTTCTGGTCATCGAAATCGCTCTACTACAACCCCGTGTGGCATGCCATCGTCTCTTCGTGGGAGGCCATTGTG TACAGCCCTGTTCTTGATCTTGACAGATGGGCAATCCCAATTGTTGTCATGATGTCTTTCTTAGCTGTTTATTGGCGTTG CATCGGCGCAAGGGGAAGGATCGGTCGGTCGGTGTTACCCCTGTACAATGGGTCTTTCAGAAGCAGCTCCGGTCGGCCGA GGACAGATTAA |
Ta_5D:509548014-509548020:+ does not have available information here.