
Microexon ID | Ta_5D:497776951-497776957:+ |
Species | Triticum Aestivum | Coordinates | 5D:497776951..497776957 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCTAGGCTCTCATTTGCTGTTGAAATAGCTGAAGAATTCTATGGAAGAGTGAAGGGAGAAGAGATTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQR |
Microexon-tag spanning region | 497776808-497777094 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5D02G447400.1x |
Reference Transcript ID | TraesCS5D02G447400.1 |
Gene ID | TraesCS5D02G447400 |
Gene Name | NA |
Transcript ID | TraesCS5D02G447400.1 |
Protein ID | |
Gene ID | TraesCS5D02G447400 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 4.70E-37 |
Motif start | 45 |
Motif end | 290 |
Protein seq | >TraesCS5D02G447400.1 MGRRWAPGICAVALLWLAAAAAGDPDPDELERAFPIVEPDYGHTKLRLSEQGLEAIRRIENPIAIVGVIGPYRSGKSFLL NQLLSLSCDKGFGVGHMRDTKTKGIWIWGKPVEMDVDGTKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLP ETVREADISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGNKYIDEVNQIRDS LAVMGNNSTAFSLPQPHLQRTKLCDMDDKELEPLYVTRREQLKQVVGSIIKPKFVQGKTLNGKEFVSFLQQILEALNKGE IPSTGSLVEIFNKAILERCLKVYKEKLEGLRLPVPVEKLQQIHEVANGEAKLLFDKQHFGKHHAVQSILKLEDEITKVYK NFLLANEYQSSKLCEARFSECEDQMDHLQVLKLPSMAKFNAGFFYCNRTFVMECVGPAKERYDHRMSKMLLKSRALFIKE YNNKLFNWLVTFALVMVVLGRFVIKFFLLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPLLDLDRW AIPIALLLLFWLFYWRCFARRKRGSRSVLPLYKNSHKNSSRPRSD* |
CDS seq | >TraesCS5D02G447400.1 ATGGGGCGCCGGTGGGCCCCGGGGATCTGCGCGGTGGCGCTGCTCTGGCTCGCCGCGGCCGCAGCCGGAGATCCCGATCC CGACGAGCTCGAGCGCGCGTTTCCGATTGTGGAGCCAGATTATGGCCACACTAAGCTCCGTCTGTCAGAACAAGGTCTTG AGGCCATTCGGAGGATCGAAAATCCTATCGCTATTGTTGGTGTCATTGGTCCATATCGATCTGGAAAGTCTTTTCTTCTG AACCAACTTCTCTCCTTATCATGTGATAAAGGTTTTGGAGTTGGTCATATGCGGGATACTAAAACTAAAGGTATATGGAT TTGGGGTAAACCTGTTGAGATGGATGTTGATGGCACCAAAGTATCTGTCCTTTATCTTGACACAGAAGGATTTGAGAGTG TTGGGAAGTCCAATGTATACGATGATAGGATATTTGCTTTGGCGACAGTCTTAAGTTCTGTGCTTATCTATAACCTTCCT GAGACGGTGCGTGAAGCTGATATATCTAGGCTCTCATTTGCTGTTGAAATAGCTGAAGAATTCTATGGAAGAGTGAAGGG AGAAGAGATTGCTTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTGCAAGGAAAATCAGTTCAGCAAA TGGTCAATGAAGCCCTCCAACGGGTGCCTAATGATAATGGGAACAAATATATTGACGAGGTCAATCAAATCAGGGATTCG TTGGCAGTTATGGGAAACAACAGCACTGCTTTTAGCTTGCCCCAGCCTCATCTACAAAGAACAAAGCTATGCGACATGGA TGACAAAGAGCTTGAGCCGTTATACGTTACAAGGCGAGAGCAATTGAAGCAGGTTGTTGGATCCATCATTAAACCTAAAT TTGTGCAGGGAAAAACTCTGAATGGAAAGGAATTTGTGTCCTTTCTGCAGCAGATACTTGAAGCTTTGAATAAAGGAGAG ATTCCATCAACCGGATCTCTTGTTGAAATTTTCAACAAGGCTATTCTTGAACGCTGTCTGAAGGTATATAAGGAAAAACT GGAGGGCTTACGTCTACCTGTACCAGTAGAGAAACTGCAGCAAATTCATGAGGTGGCGAATGGCGAAGCCAAATTGCTGT TTGATAAACAGCACTTTGGTAAGCATCATGCTGTACAGTCAATCCTCAAGCTTGAAGATGAGATTACAAAGGTGTACAAA AACTTCCTTCTAGCTAATGAGTATCAATCGTCCAAGCTTTGCGAAGCACGTTTTTCGGAATGTGAAGATCAAATGGATCA CCTTCAAGTCTTGAAACTTCCTTCCATGGCAAAGTTCAATGCAGGCTTTTTTTACTGCAATCGGACTTTTGTAATGGAAT GTGTGGGGCCTGCGAAGGAAAGATATGATCATAGGATGTCAAAGATGCTCCTCAAATCTCGTGCTCTTTTCATCAAGGAG TACAATAACAAGCTCTTCAATTGGTTGGTGACCTTCGCTCTGGTCATGGTCGTGCTTGGGCGCTTTGTGATCAAGTTCTT TCTACTTGAAATTGCTGCATGGGTAATGTTTATCTTCCTGGAGACATATACAAGAATGTTCTGGTCAGCAGAATCGCTTT ACTATAATCCAGCTTGGCACATAATCGTTTCATCCTGGGAAACCATCGTGTACAGTCCACTTCTCGATCTGGACAGATGG GCCATCCCCATAGCCTTGTTGCTATTATTTTGGCTTTTTTACTGGCGTTGCTTTGCTAGAAGGAAACGTGGCAGCCGCTC GGTGCTGCCACTGTACAAGAACTCTCACAAGAACTCCAGTCGCCCTAGATCAGACTGA |
Ta_5D:497776951-497776957:+ does not have available information here.