
Microexon ID | Ta_5B:640272238-640272244:+ |
Species | Triticum Aestivum | Coordinates | 5B:640272238..640272244 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCCAGACTCTCATTCGCTGTTGAACTTGCTGAAGAATTCTACGGAAGAGTGAAGGGCCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGCTGATACAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 640272080-640272379 |
Microexon-tag prediction score | 0.9585 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G466100.1x |
Reference Transcript ID | TraesCS5B02G466100.1 |
Gene ID | TraesCS5B02G466100 |
Gene Name | NA |
Transcript ID | TraesCS5B02G466100.1 |
Protein ID | |
Gene ID | TraesCS5B02G466100 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 9.40E-38 |
Motif start | 47 |
Motif end | 287 |
Protein seq | >TraesCS5B02G466100.1 MGWPRCALAICAAAAMVAMLAAAVGESDAGELERAFPIVEPDYGHTKLRLSKQGLEAIQRINTPIAVVSVIGPYRSGKSF LLNQLLSLSCNKGFGVGHMRETKTKGIWIWGTPVDVDVDGSKVSVLYLDTEGFESIGKSNVYDDRIFALAAVLSSLLVYN LPETIREADISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLEGKSVQQMVDEALQRVPNINGDKYIDEVNQIR DSLAIMGDNSTAFSLPQPHLQRTKLCDLKDQELEPLYVQRRDELKKLVASMIKPKIVQGRTLNGKEFVSFLGQILEALNK GEIPSTGSLVEVFNKGILERCLKVYTERMEIVVLPVSVDKLQLAHGLAEDEARKLFDKQHFGKHYAAQSFLNLDEEIKKV FRSYGLANEYQSSKLCEAKFSECEEKMDHLQALKLPSMAKFNAGFLRCNQSFEMECVGPAKGSYEHRMSKMLARSRALFI REYNNKLFNWLVVFSLTMVVIGRFIVKLLLLEAAAWVMFIFLETYTRLFWSSESLYYNPVWHAIVSSWEAIVYSPVLDLD RWAIPIVVMLSFLAVYWHCIGARGRIGRSVLPLYNGSFRSSSGRPRTD* |
CDS seq | >TraesCS5B02G466100.1 ATGGGGTGGCCGAGGTGTGCCCTGGCGATATGCGCGGCGGCCGCGATGGTGGCGATGCTTGCCGCGGCGGTAGGGGAATC CGATGCGGGCGAGCTAGAGCGCGCGTTTCCGATCGTGGAGCCGGATTATGGCCACACTAAGCTCCGTCTTTCGAAGCAAG GCCTGGAGGCAATCCAAAGGATCAACACCCCAATAGCTGTTGTTTCTGTCATTGGTCCATATCGATCTGGAAAATCTTTC CTTCTCAACCAGCTTCTCTCCTTGTCATGCAACAAAGGTTTTGGAGTTGGACACATGCGAGAAACCAAAACCAAAGGTAT ATGGATTTGGGGTACTCCCGTTGACGTCGATGTTGATGGCTCCAAGGTGTCTGTCCTTTACCTGGACACTGAAGGATTTG AGAGCATTGGAAAATCCAATGTGTATGATGATAGGATATTTGCTCTGGCAGCTGTCCTGAGTTCTCTTCTTGTCTACAAT CTCCCTGAGACGATTCGTGAAGCTGATATATCCAGACTCTCATTCGCTGTTGAACTTGCTGAAGAATTCTACGGAAGAGT GAAGGGCCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGCTGATACAGAGGGATTTCCTTGAAGGAAAATCTGTAC AACAGATGGTTGATGAAGCTCTCCAACGGGTGCCCAACATCAATGGAGACAAATATATTGACGAGGTCAACCAAATCAGA GACTCGTTGGCAATTATGGGTGATAACAGTACTGCTTTTAGCTTGCCCCAGCCTCATCTCCAAAGAACGAAGCTATGTGA TCTGAAGGACCAGGAACTTGAACCGTTGTATGTACAAAGGAGGGATGAACTGAAGAAATTAGTTGCATCCATGATAAAAC CTAAAATTGTGCAGGGTAGAACTTTAAATGGGAAGGAGTTCGTATCCTTCTTAGGGCAGATACTTGAAGCTTTGAATAAA GGCGAAATTCCATCGACAGGGTCGCTTGTTGAGGTTTTCAATAAGGGCATTCTTGAACGTTGCTTGAAGGTGTATACTGA AAGAATGGAAATAGTGGTCCTTCCAGTATCAGTTGATAAACTTCAGCTGGCTCATGGGTTGGCAGAAGATGAAGCTAGAA AGCTTTTTGACAAGCAACATTTTGGTAAACATTATGCTGCTCAGTCCTTCCTCAATCTTGATGAAGAAATAAAAAAGGTG TTCAGAAGCTATGGATTAGCCAATGAGTACCAGTCATCAAAGCTGTGTGAAGCAAAGTTCTCAGAATGTGAAGAAAAGAT GGATCACCTTCAAGCCTTGAAACTTCCTTCCATGGCAAAATTCAATGCAGGATTTCTCCGCTGCAATCAAAGTTTCGAAA TGGAGTGTGTGGGGCCTGCCAAGGGTAGCTATGAGCATCGAATGTCAAAGATGCTCGCAAGGTCCCGTGCTCTGTTCATC AGGGAGTATAACAACAAACTCTTCAACTGGCTGGTGGTCTTCTCCCTAACCATGGTGGTGATCGGGCGATTCATCGTAAA GCTTCTTCTACTTGAAGCTGCTGCATGGGTGATGTTCATCTTCCTGGAGACGTACACGAGGTTGTTCTGGTCATCGGAAT CGCTCTACTACAACCCCGTGTGGCACGCCATCGTCTCTTCGTGGGAGGCCATTGTGTACAGCCCTGTTCTTGATCTTGAC AGATGGGCGATCCCAATTGTTGTCATGCTGTCGTTCTTAGCTGTTTATTGGCACTGCATCGGCGCGAGGGGAAGGATCGG TCGATCGGTGTTACCCCTGTACAATGGGTCTTTCAGAAGCAGCTCCGGTCGGCCGAGGACGGATTAA |
Ta_5B:640272238-640272244:+ does not have available information here.