
Microexon ID | Ta_5B:616646048-616646054:+ |
Species | Triticum Aestivum | Coordinates | 5B:616646048..616646054 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCGAGGCTCTCATTTGCTGTTGAAATAGCTGAAGAATTCTATGGAAGAGTGAAGGGAGAAGAGATTGCTTTTGAGCCGGCAAAGCTTCTCTGGCTTATCCAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQR |
Microexon-tag spanning region | 616645905-616646191 |
Microexon-tag prediction score | 0.9645 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5B02G444000.1x |
Reference Transcript ID | TraesCS5B02G444000.1 |
Gene ID | TraesCS5B02G444000 |
Gene Name | NA |
Transcript ID | TraesCS5B02G444000.1 |
Protein ID | |
Gene ID | TraesCS5B02G444000 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 3.50E-37 |
Motif start | 45 |
Motif end | 290 |
Protein seq | >TraesCS5B02G444000.1 MGHRWAPGICAVALLWLAAAAAGDPDPDELERAFPIVEPDYGHTKLRLSEQGLEAIRRIENPIAIVGVIGPYRSGKSFLL NQLLSLSCDKGFGVGHMRDTKTKGIWIWGKPVEMDVDGTKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLP ETVREADISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGNKYIDEVNQIRDS LAVMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVSRREQLKQVVGSIIKPKFVQGKTLNGKEFVSFLQQILEALNKGE IPSTGSLVEIFNKAILERCLKVYKEKLEGLRLPVPVEKLQQIHEVANGEAKLLFDKQHFGKHHAVQSILKLEDEITKVYK NFLLANEYQSSKLCEARFSECEDQMDHLQVLKLPSMAKFNAGFFYCNRTFVMECVGPAKERYDHRMSKMLLKSRALFIKE YNNKLFNWLVTFALVMVVLGRFVIKFFLLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPLLDLDRW AIPIALLLLFWLFYWRCFARRKRGSRSVLPLYKNSHKNSSRPRSD* |
CDS seq | >TraesCS5B02G444000.1 ATGGGGCACAGGTGGGCCCCGGGGATCTGCGCGGTGGCGCTGCTCTGGCTCGCCGCGGCCGCCGCCGGAGATCCCGATCC CGACGAGCTCGAGCGCGCGTTTCCGATTGTGGAGCCAGATTATGGCCACACTAAACTCCGTCTGTCAGAACAAGGTCTTG AGGCCATTCGGAGGATCGAAAATCCTATCGCTATTGTTGGTGTCATTGGTCCATATCGATCTGGAAAGTCTTTCCTTCTG AACCAACTTCTCTCCTTATCATGTGATAAAGGTTTTGGAGTTGGTCATATGCGGGATACTAAAACTAAAGGTATATGGAT TTGGGGTAAACCTGTTGAGATGGATGTTGATGGCACCAAAGTATCTGTCCTTTATCTCGACACAGAAGGATTTGAGAGTG TTGGGAAGTCCAATGTATACGACGATAGGATATTTGCTTTGGCGACAGTCTTAAGTTCTGTGCTTATCTATAACCTTCCT GAGACGGTGCGTGAAGCTGATATATCGAGGCTCTCATTTGCTGTTGAAATAGCTGAAGAATTCTATGGAAGAGTGAAGGG AGAAGAGATTGCTTTTGAGCCGGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTGCAAGGAAAATCAGTTCAGCAAA TGGTCAATGAAGCCCTCCAACGGGTGCCTAATGATAATGGAAACAAATATATTGACGAGGTCAATCAAATCAGAGATTCG TTGGCAGTTATGGGAAACAACAGCACTGCTTTTAGCTTGCCCCAGCCTCATCTACAAAGAACAAAGCTATGCGACATGGA GGACAAAGAGCTTGAGCCGTTATACGTTTCAAGGCGAGAGCAATTGAAGCAGGTTGTTGGATCCATCATTAAACCTAAAT TTGTGCAGGGAAAAACTCTGAATGGAAAGGAATTTGTGTCCTTTCTGCAGCAGATACTTGAAGCTTTGAATAAAGGAGAG ATTCCATCAACGGGATCTCTTGTTGAAATTTTCAACAAGGCTATTCTTGAACGCTGTCTGAAGGTATATAAGGAAAAACT TGAGGGCTTACGTCTACCTGTACCAGTAGAGAAACTGCAGCAAATTCATGAGGTGGCGAATGGCGAAGCCAAATTGCTGT TTGATAAACAGCACTTTGGTAAGCATCATGCTGTACAGTCAATCCTCAAGCTTGAAGATGAGATTACAAAGGTGTACAAA AACTTCCTTCTAGCTAATGAGTATCAATCGTCCAAGCTTTGCGAAGCACGTTTCTCGGAATGTGAAGATCAAATGGATCA CCTTCAAGTCTTGAAACTTCCTTCCATGGCAAAGTTCAATGCAGGTTTTTTTTACTGCAATCGGACTTTTGTAATGGAAT GTGTGGGGCCTGCGAAGGAAAGATATGATCATAGGATGTCAAAGATGCTCCTCAAATCTCGTGCTCTTTTCATCAAGGAG TACAATAACAAGCTCTTCAATTGGTTGGTGACCTTCGCTCTGGTCATGGTCGTGCTTGGGCGCTTTGTGATCAAGTTCTT TCTACTTGAAATTGCTGCATGGGTAATGTTTATCTTCCTGGAGACATATACAAGAATGTTCTGGTCAGCAGAATCGCTGT ACTATAATCCAGCTTGGCACATAATCGTTTCATCCTGGGAAACCATCGTGTACAGTCCACTTCTCGATCTGGACAGATGG GCGATCCCCATAGCCTTGTTGCTATTATTTTGGCTTTTTTACTGGCGTTGCTTTGCTAGAAGGAAACGTGGCAGCCGCTC GGTGCTGCCACTGTACAAGAACTCTCACAAGAACTCGAGTCGCCCTAGATCAGACTGA |
Ta_5B:616646048-616646054:+ does not have available information here.