
Microexon ID | Ta_5A:621749159-621749165:+ |
Species | Triticum Aestivum | Coordinates | 5A:621749159..621749165 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTGAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCGAGGCTCTCATTTGCTGTTGAAATAGCCGAAGAATTCTATGGAAGAGTGAAGGGGGAAGAGATTGCCTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGG |
Microexon-tag Amino Acid Seq | ISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQR |
Microexon-tag spanning region | 621749016-621749302 |
Microexon-tag prediction score | 0.9587 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS5A02G440300.1x |
Reference Transcript ID | TraesCS5A02G440300.1 |
Gene ID | TraesCS5A02G440300 |
Gene Name | NA |
Transcript ID | TraesCS5A02G440300.1 |
Protein ID | |
Gene ID | TraesCS5A02G440300 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 5.60E-37 |
Motif start | 45 |
Motif end | 290 |
Protein seq | >TraesCS5A02G440300.1 MGRRWAPGICAVALLWLAAAAAGDPDPDELERAFPIVEPDYGHTKLRLSEQGLEAIRRIENPIAIVGVIGPYRSGKSFLL NQLLSLSCDKGFGVGHMRDTKTKGIWIWGKPVEMDVDGTKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLP ETVREADISRLSFAVEIAEEFYGRVKGEEIAFEPAKLLWLIQRDFLQGKSVQQMVNEALQRVPNDNGNKYIDEVNQIRDS LAIMGNNSTAFSLPQPHLQRTKLCDMEDKELEPLYVTRREQLKQVVGSIIKPKFVQGKTLNGKEFVSFLQQILEALNKGE IPSTGSLVEIFNKAILERCLKVYKEKLEGLRLPVPVEKLQQIHEVANGEAKLLFDKQHFGKHHAVQSILKLEDEITKVYK NFLLANEYQSSKLCEARFSECEDQMDHLQVLKLPSMAKFNAGFFYCNRTFVMECVGPAKERYDHRMSKMLLKSRALFIKE YNNKLFNWLVTFALVMVVLGRFVIKFFLLEIAAWVMFIFLETYTRMFWSAESLYYNPAWHIIVSSWETIVYSPLLDLDRW AIPIALLLLFWLFYWRCFARRKRGSRSVLPLYKNSHKNSSRPRSD* |
CDS seq | >TraesCS5A02G440300.1 ATGGGGCGCCGGTGGGCCCCGGGGATCTGCGCGGTGGCGCTGCTCTGGCTCGCCGCGGCCGCTGCCGGAGATCCCGATCC CGACGAGCTCGAGCGCGCGTTTCCAATTGTGGAGCCAGATTATGGCCACACTAAACTCCGTCTGTCGGAACAAGGTCTTG AGGCCATCCGGAGGATCGAAAATCCTATCGCTATTGTTGGTGTCATTGGTCCATATCGATCTGGAAAGTCTTTTCTCCTG AACCAACTTCTCTCCTTATCATGTGATAAAGGTTTTGGAGTTGGCCATATGCGGGATACTAAAACGAAAGGTATATGGAT TTGGGGTAAACCTGTTGAGATGGATGTTGATGGCACCAAAGTATCTGTCCTTTATCTTGACACAGAAGGATTTGAGAGTG TTGGAAAGTCCAATGTATACGACGATAGGATATTTGCGTTGGCAACAGTCTTAAGTTCTGTGCTTATCTATAACCTTCCT GAGACGGTGCGTGAAGCTGATATATCGAGGCTCTCATTTGCTGTTGAAATAGCCGAAGAATTCTATGGAAGAGTGAAGGG GGAAGAGATTGCCTTTGAGCCAGCAAAGCTTCTCTGGCTTATCCAGAGGGATTTCCTGCAAGGAAAATCAGTTCAGCAAA TGGTCAATGAAGCCCTCCAGCGGGTACCTAATGATAATGGGAACAAATATATTGACGAGGTCAATCAAATCAGAGATTCT TTGGCAATTATGGGAAACAACAGCACTGCTTTTAGCTTGCCCCAGCCTCATCTACAAAGAACAAAGCTATGCGACATGGA GGACAAAGAGCTTGAGCCGTTATACGTTACAAGGCGAGAGCAATTGAAGCAGGTTGTTGGATCCATCATTAAACCTAAAT TTGTGCAGGGAAAAACTCTCAATGGAAAGGAATTTGTGTCCTTTCTGCAGCAGATACTTGAAGCTTTGAATAAAGGAGAG ATTCCATCAACAGGATCTCTTGTTGAAATTTTCAACAAGGCTATTCTTGAACGCTGTCTGAAGGTATATAAGGAAAAACT GGAGGGCTTACGTCTACCTGTACCAGTAGAGAAACTGCAGCAAATTCATGAGGTGGCGAATGGCGAAGCCAAATTGCTGT TTGATAAACAGCACTTTGGTAAGCATCATGCTGTACAGTCAATCCTCAAGCTTGAAGATGAGATTACAAAGGTGTACAAA AACTTCCTTCTAGCTAATGAGTATCAATCGTCCAAGCTTTGCGAAGCACGTTTCTCGGAATGTGAAGATCAAATGGATCA CCTTCAAGTCTTGAAACTTCCTTCCATGGCAAAGTTCAATGCAGGTTTTTTTTACTGCAATCGGACTTTTGTAATGGAAT GTGTGGGGCCTGCAAAGGAAAGATATGATCATAGGATGTCAAAGATGCTCCTCAAATCTCGTGCTCTTTTCATCAAGGAA TACAATAACAAGCTCTTCAATTGGTTGGTGACTTTTGCTCTGGTCATGGTCGTGCTTGGGCGCTTTGTGATCAAGTTCTT TCTACTTGAAATTGCTGCATGGGTAATGTTTATCTTCCTGGAGACATATACAAGAATGTTCTGGTCAGCAGAATCGCTGT ACTATAATCCAGCTTGGCACATAATCGTTTCATCCTGGGAAACCATCGTGTACAGTCCACTTCTCGATCTGGACAGATGG GCCATCCCCATAGCCTTGTTGCTATTGTTTTGGCTTTTTTACTGGCGTTGCTTTGCTAGAAGGAAACGTGGCAGCCGCTC GGTGCTGCCACTGTACAAGAACTCTCACAAGAACTCCAGTCGCCCTAGATCAGACTGA |
Ta_5A:621749159-621749165:+ does not have available information here.