Microexon ID Sm_GL377582:2372686-2372692:-
Species Selaginella moellendorffii
Coordinates GL377582:2372686..2372692
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq TGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATCTCCAAACTTTCTTTTGCAGTGGAATTGGGCGAGGAGTTTTATGGCCGTGTGAAGGGACATGCAGCCTCGTTCGAACCGTCAAAACTTCTTTGGCTCATTCAGCGA
Microexon-tag Amino Acid Seq ISKLSFAVELGEEFYGRVKGHAASFEPSKLLWLIQR
Microexon-tag spanning region2372584-2372803
Microexon-tag prediction score0.8629
Overlapped with the annotated transcript (%) NA
New Transcript ID NA
Reference Transcript ID NA
Gene ID NA
Gene Name NA
Sm_GL377582:2372686-2372692:- does not have available information here.
Microexon DNA seq TGTGAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATCTCCAAACTTTCTTTTGCAGTGGAATTGGGCGAGGAGTTTTATGGCCGTGTGAAGGGACATGCAGCCTCGTTCGAACCGTCAAAACTTCTTTGGCTCATTCAGCGA
Microexon-tag Amino Acid seq ISKLSFAVELGEEFYGRVKGHAASFEPSKLLWLIQR
Transcript ID Sm.10939.1
Gene ID Sm.10939
Gene Name NA
Pfam domain motif GBP
Motif E-value 1.2e-34
Motif start 60
Motif end 269
Protein seq >Sm.10939.1
MELIQMLSMQARGEGEQPMGLLLRLLSLWILLLGLARARPLEIFSHQAFPVVEPDPGHTKLAISKQGLELISSIKNPISV
VAVIGPYRSGKSFLLNQLLSLTCNEGFGVGHLRDTQTRGIWLWGEPMELTIGNSVTSVLFMDTEGFESIGKSNVYDDRIF
ALAALLSSVLIYNLPETVREADISKLSFAVELGEEFYGRVKGHAASFEPSKLLWLIQRDFLEGKTVQEMVREALQPVVNP
TGDKDIDQVNRIRESLSLMAQNSTAFGLPQAVMIASPSSHQTM*
CDS seq >Sm.10939.1
ATGGAGCTGATTCAAATGCTGTCAATGCAGGCCCGCGGCGAGGGCGAGCAGCCGATGGGATTGCTTCTGCGGCTTCTTTC
ACTCTGGATCTTGCTTCTAGGTCTAGCCCGGGCGCGGCCTCTGGAGATCTTCTCGCATCAAGCCTTCCCCGTCGTGGAGC
CAGATCCGGGTCACACAAAGCTCGCAATCTCAAAACAAGGACTGGAGCTCATCTCAAGCATAAAGAATCCAATTTCCGTG
GTTGCGGTCATAGGTCCCTATCGATCGGGAAAATCATTTCTTCTAAACCAGCTTCTATCTCTCACTTGCAATGAAGGATT
TGGAGTTGGACACTTGCGAGACACGCAGACTCGCGGCATCTGGCTATGGGGAGAACCCATGGAGTTGACAATTGGCAACT
CGGTCACGTCTGTCCTCTTTATGGATACGGAGGGATTCGAAAGCATAGGAAAATCAAATGTCTACGATGACAGGATTTTC
GCTCTAGCAGCATTACTTAGCTCAGTTCTTATTTACAACCTTCCGGAGACGGTCAGGGAAGCAGACATCTCCAAACTTTC
TTTTGCAGTGGAATTGGGCGAGGAGTTTTATGGCCGTGTGAAGGGACATGCAGCCTCGTTCGAACCGTCAAAACTTCTTT
GGCTCATTCAGCGAGATTTCCTTGAGGGAAAAACTGTACAAGAAATGGTGAGGGAGGCTCTTCAACCGGTTGTTAATCCC
ACCGGAGACAAAGACATTGATCAGGTCAATCGCATTAGAGAGTCTTTGAGTTTGATGGCACAAAACAGCACAGCATTTGG
CTTACCGCAGGCTGTGATGATAGCCTCACCTTCATCGCACCAAACTATGTGA