
Microexon ID | Sl_9:64318129-64318135:+ |
Species | Solanum Lycopersicum | Coordinates | 9:64318129..64318135 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTAAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCCCGGCTGTCATTCGCAGTTGAACTTGCGGAGGAGTTCTATGGAAGAGTAAAGGGGCAAGATGTTGCGTTTGAACCTGCAAAGCTACTATGGCTCATCCAACGT |
Microexon-tag Amino Acid Seq | ISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 64317941-64318300 |
Microexon-tag prediction score | 0.9681 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc09g065810.3.1x |
Reference Transcript ID | Solyc09g065810.3.1 |
Gene ID | Solyc09g065810.3 |
Gene Name | NA |
Transcript ID | Solyc09g065810.3.1 |
Protein ID | |
Gene ID | Solyc09g065810.3 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 9.00E-36 |
Motif start | 43 |
Motif end | 288 |
Protein seq | >Solyc09g065810.3.1 MKLSWPIALFYTFLCFFASGSFSSIENFHQPFPIIEPDPGHTKLRLSREGLEAIEKITTPIAAVAVIGPYRSGKSFTLNQ LLSLSCDEGFGVGHMRDTKTKGIWVWGTPVEMDINGVKTSVFYLDTEGFESIGKSNVYDDRIFALAAVMSSVLIYNLPET IREADISRLSFAVELAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVDEALRRVPNSNGDKNIDQVNQIRDSLA IMGDNSTAFSLPQPHLQRTKLCDMKDAELDPLYVKKREQLKEVVASIIRPKIVQGKSLNGKEFVSFLEQILDALNKGEIP STGSLVEVFNKGILERCLKLYNERMAKLVLPMPGESLQKAHVENRQAAMNVFDEQHFGRHHAKKSVDKLDEEIEKVYKNI MLANEYQSSKLCEALYTRCEDKMDNLQVLRLPSMAKFNAGFIQCNQSFHGECVGPSKINYEKRMMKMLEKSKSSFIKDYN HRLFNWLVAFSLFMVVVGRFVIKFILVEIGAWILFIFLETYTRMFWSAESLYYNPMWHFIVATWETLVYSPILDLDRWAI PVFVMAVIFVVYWRCYGRRKHGPMLLLPMYSNPKDRHRTE* |
CDS seq | >Solyc09g065810.3.1 ATGAAGCTTTCTTGGCCAATCGCGCTTTTCTACACATTTCTTTGCTTTTTCGCATCTGGGTCATTTTCTTCTATTGAGAA TTTTCATCAACCGTTTCCTATTATAGAGCCTGATCCAGGTCACACAAAACTTCGCCTTTCAAGAGAAGGATTGGAGGCAA TTGAGAAGATAACTACACCCATTGCAGCTGTTGCTGTAATTGGTCCATATCGTTCGGGAAAATCATTTACTCTCAATCAG CTCCTTTCCCTGTCTTGTGATGAAGGTTTTGGTGTTGGTCATATGCGTGATACAAAGACAAAAGGTATATGGGTTTGGGG TACTCCAGTAGAGATGGATATCAATGGAGTAAAAACTTCTGTTTTTTACCTTGACACAGAAGGTTTTGAAAGCATTGGAA AATCTAATGTATACGATGACCGGATTTTTGCCCTTGCAGCTGTTATGAGTTCTGTGCTTATATATAATCTCCCTGAGACG ATACGTGAAGCTGATATATCCCGGCTGTCATTCGCAGTTGAACTTGCGGAGGAGTTCTATGGAAGAGTAAAGGGGCAAGA TGTTGCGTTTGAACCTGCAAAGCTACTATGGCTCATCCAACGTGATTTTCTGCAAGGAAAATCTGTGCAAGAAATGGTTG ATGAAGCTCTAAGACGTGTCCCTAATAGCAACGGTGATAAAAATATTGATCAGGTGAATCAGATTCGAGATTCTTTAGCC ATAATGGGTGATAATAGCACAGCGTTCAGCTTACCACAACCCCATCTTCAGCGCACAAAGCTTTGTGACATGAAGGACGC TGAGCTTGATCCTCTCTATGTCAAGAAGAGGGAGCAATTAAAAGAAGTTGTAGCATCTATTATTCGTCCAAAAATTGTCC AGGGTAAATCTCTCAACGGGAAGGAGTTCGTATCTTTCCTTGAGCAGATTCTTGATGCATTGAATAAAGGGGAGATTCCA TCCACAGGGTCCCTTGTGGAAGTCTTCAACAAGGGTATCCTGGAGCGGTGTCTAAAACTCTACAATGAGAGGATGGCTAA GTTGGTTTTGCCAATGCCTGGGGAGTCTTTGCAAAAGGCTCATGTAGAGAACAGACAGGCAGCGATGAATGTCTTTGATG AACAGCATTTTGGTCGTCATCATGCAAAAAAATCAGTTGATAAATTGGATGAAGAGATCGAAAAGGTGTACAAGAATATA ATGCTGGCGAATGAATATCAATCCTCAAAGCTGTGTGAGGCTTTGTATACTAGATGTGAGGACAAAATGGACAATCTTCA GGTCCTCAGACTTCCTTCGATGGCAAAGTTCAATGCTGGCTTCATCCAGTGTAACCAAAGCTTTCATGGTGAATGTGTCG GACCTTCTAAAATCAACTATGAGAAGCGGATGATGAAGATGTTAGAGAAGTCAAAGTCTTCATTCATCAAGGACTATAAT CACAGACTCTTTAATTGGTTGGTGGCTTTCTCACTGTTCATGGTGGTGGTCGGGCGGTTCGTCATAAAGTTTATTTTGGT CGAGATTGGCGCATGGATACTTTTTATTTTCTTAGAAACATATACAAGAATGTTTTGGTCTGCAGAGTCACTTTACTATA ATCCAATGTGGCATTTTATTGTAGCTACTTGGGAAACGCTCGTGTATAGTCCAATCCTTGATCTGGACAGGTGGGCAATC CCTGTGTTTGTAATGGCTGTAATATTTGTGGTATATTGGCGGTGTTATGGGAGACGGAAACACGGTCCCATGTTGTTGTT ACCCATGTACAGCAATCCTAAAGACCGGCATAGAACAGAATAG |
Sl_9:64318129-64318135:+ does not have available information here.