
Microexon ID | Sb_2:5268390-5268396:- |
Species | Sorghum Bicolor | Coordinates | 2:5268390..5268396 |
Microexon Cluster ID | MEP15 |
Size | 7 |
Phase | 2 |
Pfam Domain Motif | GBP |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 50,7,51 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | AGTCAAG |
Microexon Amino Acid seq | RVK |
Microexon-tag DNA Seq | ATATCTAGGCTTTCATTTGCTGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGTTGATCCAGAGA |
Microexon-tag Amino Acid Seq | ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR |
Microexon-tag spanning region | 5268264-5268542 |
Microexon-tag prediction score | 0.9674 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EER98071x |
Reference Transcript ID | EER98071 |
Gene ID | SORBI_3002G055200 |
Gene Name | NA |
Transcript ID | EER98071 |
Protein ID | |
Gene ID | SORBI_3002G055200 |
Gene Name | |
Pfam domain motif | GBP |
Motif E-value | 6.70E-37 |
Motif start | 43 |
Motif end | 286 |
Protein seq | >EER98071 MGCAPAMWAALWLLAAAVAAGVADPGGLERAFPIVEPDYGHTKLRLAKEGLEAIQRIRTPIAAVSVIGPYRSGKSFLLNQ LLSLSCDKGFGVGHMRDTKTKGIWVWGSPVEVDIGGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPET IREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALLRVPNNNGDKNIDELNQIRDSLA VMGDNSTAFSLPQPHLQRTKLCDMEDQELDPLYVKKRDQLKEVVASMIKPKIVQGRILNGTEFVSFLGQILEALNKGEIP STGSLVEIFNKAILERCLKVYNERMGRAGLPVSVDKLQQFHDLAKDEAKRLFDKQHFGKHHAAQSIFKLDEEIKKVYRNF GQANEYQSSKLCEARFSECEDKMEHLQVLKLPSMAKFDAGFLLCNQSFEMDCVGPAKESYQRRMSKMLARSRALFIKEYN NKLFNWLVIFSLVMVVIGRFLIKFFLLEIAAWVMFAFLETYTRLFWSSESLYYNPVWHMIVSSWETIVYSPVLDLDRWAF PIGAVLFFLAFYWRCLGGRRGIARSLLPLYNGSYRSSSRTRTD* |
CDS seq | >EER98071 ATGGGGTGTGCCCCGGCGATGTGGGCCGCGCTGTGGCTGCTTGCTGCTGCGGTGGCGGCAGGGGTTGCCGATCCCGGCGG CCTTGAGCGCGCGTTTCCAATAGTGGAGCCAGACTATGGGCATACGAAACTTCGTCTCGCAAAAGAAGGTTTGGAAGCAA TTCAAAGGATCAGAACTCCAATCGCTGCTGTCTCTGTTATTGGTCCCTATCGGTCTGGAAAATCTTTTCTTCTCAACCAA CTTCTCTCTCTATCATGTGACAAAGGTTTTGGAGTTGGACACATGCGGGATACCAAAACAAAAGGTATATGGGTATGGGG TTCCCCTGTTGAGGTGGATATTGGTGGCTCCAAAGTGTCTGTCCTATACCTGGACACTGAAGGATTTGAGAGTGTTGGAA AATCAAATGTATATGATGATAGGATATTTGCTCTGGCAACTGTTTTAAGTTCTGTTCTGATCTACAATCTTCCTGAAACA ATTCGTGAAGCTGATATATCTAGGCTTTCATTTGCTGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGA TGTTGCTTTTGAGCCAGCAAAACTTCTGTGGTTGATCCAGAGAGATTTCCTCCAAGGAAAATCTGTTCAGCAGATGGTTG ATGAAGCTCTGCTACGGGTACCTAACAACAACGGAGACAAAAATATTGATGAGCTCAACCAAATCAGAGACTCTTTGGCG GTTATGGGAGATAACAGTACAGCTTTTAGCTTACCACAGCCTCATTTGCAAAGGACAAAGTTATGTGATATGGAGGACCA AGAACTTGATCCATTGTATGTAAAGAAGAGGGATCAATTGAAAGAAGTTGTTGCATCCATGATAAAACCAAAAATTGTGC AGGGTAGAATTCTGAATGGGACAGAGTTTGTATCCTTCCTAGGGCAGATACTTGAGGCTTTGAATAAAGGTGAAATTCCA TCAACCGGATCGCTTGTTGAAATTTTCAATAAGGCCATTCTTGAACGTTGCTTGAAGGTGTACAATGAAAGAATGGGCAG AGCAGGTCTACCAGTGTCAGTGGATAAACTTCAGCAGTTCCATGACCTGGCAAAAGATGAAGCTAAAAGGCTTTTCGACA AGCAGCATTTCGGTAAACATCATGCTGCTCAGTCCATCTTCAAGCTTGATGAAGAGATTAAAAAGGTCTACAGAAACTTC GGTCAAGCTAATGAGTATCAGTCATCAAAGCTGTGCGAAGCACGGTTCTCAGAGTGTGAAGATAAAATGGAACACCTTCA AGTCTTGAAGCTTCCATCCATGGCAAAATTTGATGCCGGATTTCTTCTCTGCAATCAAAGCTTTGAAATGGATTGCGTGG GGCCAGCCAAGGAAAGCTATCAACGCCGAATGTCAAAGATGCTGGCAAGGTCCCGAGCTCTTTTCATCAAGGAGTACAAC AACAAACTCTTCAACTGGCTGGTCATATTCTCCCTGGTCATGGTTGTCATTGGACGCTTCTTGATCAAGTTCTTCCTGCT TGAAATCGCTGCGTGGGTGATGTTTGCCTTCCTGGAGACATACACGAGGCTGTTTTGGTCATCAGAGTCCCTGTACTACA ACCCCGTCTGGCACATGATCGTCTCTTCGTGGGAAACCATCGTCTACAGCCCTGTTCTTGATCTTGACAGATGGGCATTC CCAATCGGTGCAGTTCTGTTTTTTCTGGCATTTTATTGGCGTTGCCTTGGTGGAAGGAGAGGAATTGCCCGGTCACTGCT ACCTCTGTATAACGGGTCTTACAGAAGCTCCAGTCGTACAAGAACAGACTGA |
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