Microexon ID Sb_2:5268390-5268396:-
Species Sorghum   Bicolor
Coordinates 2:5268390..5268396
Microexon Cluster ID MEP15
Size 7
Phase 2
Pfam Domain Motif GBP
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 50,7,51
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq ATATCTMGRYTSTCATTTGCTGTTGARMTTGCTGAAGARTTYTATGGAAGAGTGAAGGGRCAAGATGTTGCWTTTGARCCWGCWAARCTYYTGTGGCTTATCCARMGT
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq AGTCAAG
Microexon Amino Acid seq RVK
Microexon-tag DNA Seq ATATCTAGGCTTTCATTTGCTGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGATGTTGCTTTTGAGCCAGCAAAACTTCTGTGGTTGATCCAGAGA
Microexon-tag Amino Acid Seq ISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQR
Microexon-tag spanning region5268264-5268542
Microexon-tag prediction score0.9674
Overlapped with the annotated transcript (%) 100
New Transcript ID EER98071x
Reference Transcript ID EER98071
Gene ID SORBI_3002G055200
Gene Name NA
Transcript ID EER98071
Protein ID
Gene ID SORBI_3002G055200
Gene Name
Pfam domain motif GBP
Motif E-value 6.70E-37
Motif start 43
Motif end 286
Protein seq >EER98071
MGCAPAMWAALWLLAAAVAAGVADPGGLERAFPIVEPDYGHTKLRLAKEGLEAIQRIRTPIAAVSVIGPYRSGKSFLLNQ
LLSLSCDKGFGVGHMRDTKTKGIWVWGSPVEVDIGGSKVSVLYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPET
IREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALLRVPNNNGDKNIDELNQIRDSLA
VMGDNSTAFSLPQPHLQRTKLCDMEDQELDPLYVKKRDQLKEVVASMIKPKIVQGRILNGTEFVSFLGQILEALNKGEIP
STGSLVEIFNKAILERCLKVYNERMGRAGLPVSVDKLQQFHDLAKDEAKRLFDKQHFGKHHAAQSIFKLDEEIKKVYRNF
GQANEYQSSKLCEARFSECEDKMEHLQVLKLPSMAKFDAGFLLCNQSFEMDCVGPAKESYQRRMSKMLARSRALFIKEYN
NKLFNWLVIFSLVMVVIGRFLIKFFLLEIAAWVMFAFLETYTRLFWSSESLYYNPVWHMIVSSWETIVYSPVLDLDRWAF
PIGAVLFFLAFYWRCLGGRRGIARSLLPLYNGSYRSSSRTRTD*
CDS seq >EER98071
ATGGGGTGTGCCCCGGCGATGTGGGCCGCGCTGTGGCTGCTTGCTGCTGCGGTGGCGGCAGGGGTTGCCGATCCCGGCGG
CCTTGAGCGCGCGTTTCCAATAGTGGAGCCAGACTATGGGCATACGAAACTTCGTCTCGCAAAAGAAGGTTTGGAAGCAA
TTCAAAGGATCAGAACTCCAATCGCTGCTGTCTCTGTTATTGGTCCCTATCGGTCTGGAAAATCTTTTCTTCTCAACCAA
CTTCTCTCTCTATCATGTGACAAAGGTTTTGGAGTTGGACACATGCGGGATACCAAAACAAAAGGTATATGGGTATGGGG
TTCCCCTGTTGAGGTGGATATTGGTGGCTCCAAAGTGTCTGTCCTATACCTGGACACTGAAGGATTTGAGAGTGTTGGAA
AATCAAATGTATATGATGATAGGATATTTGCTCTGGCAACTGTTTTAAGTTCTGTTCTGATCTACAATCTTCCTGAAACA
ATTCGTGAAGCTGATATATCTAGGCTTTCATTTGCTGTCGAAATTGCTGAAGAATTCTATGGAAGAGTCAAGGGGCAAGA
TGTTGCTTTTGAGCCAGCAAAACTTCTGTGGTTGATCCAGAGAGATTTCCTCCAAGGAAAATCTGTTCAGCAGATGGTTG
ATGAAGCTCTGCTACGGGTACCTAACAACAACGGAGACAAAAATATTGATGAGCTCAACCAAATCAGAGACTCTTTGGCG
GTTATGGGAGATAACAGTACAGCTTTTAGCTTACCACAGCCTCATTTGCAAAGGACAAAGTTATGTGATATGGAGGACCA
AGAACTTGATCCATTGTATGTAAAGAAGAGGGATCAATTGAAAGAAGTTGTTGCATCCATGATAAAACCAAAAATTGTGC
AGGGTAGAATTCTGAATGGGACAGAGTTTGTATCCTTCCTAGGGCAGATACTTGAGGCTTTGAATAAAGGTGAAATTCCA
TCAACCGGATCGCTTGTTGAAATTTTCAATAAGGCCATTCTTGAACGTTGCTTGAAGGTGTACAATGAAAGAATGGGCAG
AGCAGGTCTACCAGTGTCAGTGGATAAACTTCAGCAGTTCCATGACCTGGCAAAAGATGAAGCTAAAAGGCTTTTCGACA
AGCAGCATTTCGGTAAACATCATGCTGCTCAGTCCATCTTCAAGCTTGATGAAGAGATTAAAAAGGTCTACAGAAACTTC
GGTCAAGCTAATGAGTATCAGTCATCAAAGCTGTGCGAAGCACGGTTCTCAGAGTGTGAAGATAAAATGGAACACCTTCA
AGTCTTGAAGCTTCCATCCATGGCAAAATTTGATGCCGGATTTCTTCTCTGCAATCAAAGCTTTGAAATGGATTGCGTGG
GGCCAGCCAAGGAAAGCTATCAACGCCGAATGTCAAAGATGCTGGCAAGGTCCCGAGCTCTTTTCATCAAGGAGTACAAC
AACAAACTCTTCAACTGGCTGGTCATATTCTCCCTGGTCATGGTTGTCATTGGACGCTTCTTGATCAAGTTCTTCCTGCT
TGAAATCGCTGCGTGGGTGATGTTTGCCTTCCTGGAGACATACACGAGGCTGTTTTGGTCATCAGAGTCCCTGTACTACA
ACCCCGTCTGGCACATGATCGTCTCTTCGTGGGAAACCATCGTCTACAGCCCTGTTCTTGATCTTGACAGATGGGCATTC
CCAATCGGTGCAGTTCTGTTTTTTCTGGCATTTTATTGGCGTTGCCTTGGTGGAAGGAGAGGAATTGCCCGGTCACTGCT
ACCTCTGTATAACGGGTCTTACAGAAGCTCCAGTCGTACAAGAACAGACTGA
Sb_2:5268390-5268396:- does not have available information here.